RNA–Protein interactions for RNA: YMR008C

PLB1, Transcript of Phospholipase B (lysophospholipase) involved in lipid metabolism, yeastyeast

Gene PLB1, Length 1,995 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PLB1YMR008C SGS1P35187 1447 aa17.77■□□□□ 0.43
PLB1YMR008C INO80P53115 1489 aa17.39■□□□□ 0.37
PLB1YMR008C TCB3Q03640 1545 aaKnown RBP17.15■□□□□ 0.34
PLB1YMR008C SPA2P23201 1466 aaKnown RBP17.02■□□□□ 0.32
PLB1YMR008C SSN2P38931 1420 aa16.98■□□□□ 0.31
PLB1YMR008C TY1B-DR4Q07793 1604 aa16.94■□□□□ 0.3
PLB1YMR008C MON2P48563 1636 aaPredicted RBP16.84■□□□□ 0.29
PLB1YMR008C HSL1P34244 1518 aa16.64■□□□□ 0.25
PLB1YMR008C SPT6P23615 1451 aaKnown RBP16.58■□□□□ 0.25
PLB1YMR008C SWR1Q05471 1514 aa16.55■□□□□ 0.24
PLB1YMR008C DRS1P32892 752 aaKnown RBP16.45■□□□□ 0.22
PLB1YMR008C HIR3P47171 1648 aa16.35■□□□□ 0.21
PLB1YMR008C XRN1P22147 1528 aaKnown RBP16.24■□□□□ 0.19
PLB1YMR008C DNA2P38859 1522 aa16.05■□□□□ 0.16
PLB1YMR008C REV3P14284 1504 aa16.02■□□□□ 0.15
PLB1YMR008C KOG1P38873 1557 aa15.97■□□□□ 0.15
PLB1YMR008C SIN3P22579 1536 aa15.9■□□□□ 0.14
PLB1YMR008C THO2P53552 1597 aaKnown RBP15.86■□□□□ 0.13
PLB1YMR008C SSK2P53599 1579 aa15.82■□□□□ 0.12
PLB1YMR008C TAF2P23255 1407 aa15.82■□□□□ 0.12
PLB1YMR008C BUD4P47136 1447 aa15.76■□□□□ 0.11
PLB1YMR008C ECM5Q03214 1411 aa15.72■□□□□ 0.11
PLB1YMR008C ESP1Q03018 1630 aa15.67■□□□□ 0.1
PLB1YMR008C ATG2P53855 1592 aa15.63■□□□□ 0.09
PLB1YMR008C MYO2P19524 1574 aaKnown RBP15.59■□□□□ 0.09
PLB1YMR008C SKI3P17883 1432 aaKnown RBP15.54■□□□□ 0.08
PLB1YMR008C PEP1P32319 1579 aa15.49■□□□□ 0.07
PLB1YMR008C MDS3P53094 1487 aa15.47■□□□□ 0.07
PLB1YMR008C YPK9Q12697 1472 aa15.46■□□□□ 0.07
PLB1YMR008C POL1P13382 1468 aa15.4■□□□□ 0.06
PLB1YMR008C STU1P38198 1513 aa15.33■□□□□ 0.04
PLB1YMR008C SCC2Q04002 1493 aa15.31■□□□□ 0.04
PLB1YMR008C CHD1P32657 1468 aa15.3■□□□□ 0.04
PLB1YMR008C RPO31P04051 1460 aa15.24■□□□□ 0.03
PLB1YMR008C MMS22Q06164 1454 aa15.23■□□□□ 0.03
PLB1YMR008C RKR1Q04781 1562 aa15.21■□□□□ 0.03
PLB1YMR008C YTA7P40340 1379 aa15.2■□□□□ 0.02
PLB1YMR008C UFD4P33202 1483 aa15.18■□□□□ 0.02
PLB1YMR008C YOR1P53049 1477 aa15.16■□□□□ 0.02
PLB1YMR008C BPT1P14772 1559 aa15.16■□□□□ 0.02
PLB1YMR008C TOP2P06786 1428 aaKnown RBP15.14■□□□□ 0.01
PLB1YMR008C YCF1P39109 1515 aaKnown RBP15.11■□□□□ 0.01
PLB1YMR008C SMC4Q12267 1418 aa15.06■□□□□ 0
PLB1YMR008C TY2B-LR1P0C2J3 1770 aa15.05■□□□□ -0
PLB1YMR008C TY2B-FP0CX63 1770 aa15.05■□□□□ -0
PLB1YMR008C TY2B-GR2P0CX64 1770 aa15.05■□□□□ -0
PLB1YMR008C TY2B-CP25384 1770 aa15.05■□□□□ -0
PLB1YMR008C TY2B-DR2Q03494 1770 aa15.05■□□□□ -0
PLB1YMR008C TY1B-DR1Q03855 1755 aa15.05■□□□□ -0
PLB1YMR008C TY2B-DR3Q07791 1770 aaKnown RBP15.05■□□□□ -0
PLB1YMR008C TY2B-OR1Q12113 1770 aa15.05■□□□□ -0
PLB1YMR008C TY2B-DR1Q12472 1770 aa15.05■□□□□ -0
PLB1YMR008C TY2B-OR2Q12501 1770 aa15.05■□□□□ -0
PLB1YMR008C MYO4P32492 1471 aa15.03■□□□□ -0
PLB1YMR008C SAS10Q12136 610 aaPredicted RBP14.98□□□□□ -0.01
PLB1YMR008C TY1B-DR3Q99231 1755 aa14.97□□□□□ -0.01
PLB1YMR008C TY2B-BQ12491 1770 aa14.91□□□□□ -0.02
PLB1YMR008C SNQ2P32568 1501 aaKnown RBP14.83□□□□□ -0.04
PLB1YMR008C TY1B-BRQ12193 1756 aa14.82□□□□□ -0.04
PLB1YMR008C TY1B-GR3Q12316 1755 aa14.82□□□□□ -0.04
PLB1YMR008C TY1B-ORQ92393 1755 aa14.82□□□□□ -0.04
PLB1YMR008C TY1B-HO13535 1793 aa14.81□□□□□ -0.04
PLB1YMR008C TY1B-DR5P0C2I2 1755 aa14.81□□□□□ -0.04
PLB1YMR008C TY1B-DR6P0C2I3 1755 aa14.81□□□□□ -0.04
PLB1YMR008C TY1B-LR2P0C2I5 1755 aa14.81□□□□□ -0.04
PLB1YMR008C TY1B-LR3P0C2I6 1755 aaKnown RBP14.81□□□□□ -0.04
PLB1YMR008C TY1B-PR1P0C2I9 1755 aaKnown RBP14.81□□□□□ -0.04
PLB1YMR008C TY1B-PR2P0C2J0 1756 aa14.81□□□□□ -0.04
PLB1YMR008C TY1B-PR3P0C2J1 1755 aaKnown RBP14.81□□□□□ -0.04
PLB1YMR008C TY1B-JR1P47098 1755 aa14.81□□□□□ -0.04
PLB1YMR008C TY1B-ML2Q03434 1755 aaKnown RBP14.81□□□□□ -0.04
PLB1YMR008C TY1B-ER1Q03612 1755 aa14.81□□□□□ -0.04
PLB1YMR008C TY1B-ML1Q04711 1755 aaKnown RBP14.81□□□□□ -0.04
PLB1YMR008C TY1B-GR2Q12269 1755 aa14.81□□□□□ -0.04
PLB1YMR008C TY1B-OLQ12273 1755 aa14.81□□□□□ -0.04
PLB1YMR008C TY1B-PLQ12414 1755 aaKnown RBP14.81□□□□□ -0.04
PLB1YMR008C SPP41P38904 1435 aa14.8□□□□□ -0.04
PLB1YMR008C STH1P32597 1359 aa14.8□□□□□ -0.04
PLB1YMR008C RQC2Q12532 1038 aaKnown RBP14.78□□□□□ -0.04
PLB1YMR008C TAF7Q05021 590 aa14.77□□□□□ -0.04
PLB1YMR008C RSE1Q04693 1361 aaKnown RBP14.75□□□□□ -0.05
PLB1YMR008C CDC25P04821 1589 aa14.75□□□□□ -0.05
PLB1YMR008C TRM732Q03496 1420 aa14.7□□□□□ -0.06
PLB1YMR008C TSC11P40061 1430 aa14.69□□□□□ -0.06
PLB1YMR008C MLP2P40457 1679 aa14.69□□□□□ -0.06
PLB1YMR008C PAN1P32521 1480 aa14.69□□□□□ -0.06
PLB1YMR008C VTH1P40438 1549 aa14.67□□□□□ -0.06
PLB1YMR008C VTH2P40890 1549 aa14.67□□□□□ -0.06
PLB1YMR008C PDR15Q04182 1529 aaKnown RBP14.66□□□□□ -0.06
PLB1YMR008C ULS1Q08562 1619 aa14.61□□□□□ -0.07
PLB1YMR008C IKI3Q06706 1349 aaKnown RBP14.6□□□□□ -0.07
PLB1YMR008C IFH1P39520 1085 aa14.58□□□□□ -0.08
PLB1YMR008C GEA1P47102 1408 aaPredicted RBP14.57□□□□□ -0.08
PLB1YMR008C TY1B-JR2P47100 1755 aaKnown RBP14.57□□□□□ -0.08
PLB1YMR008C TY1B-ER2Q03619 1755 aa14.57□□□□□ -0.08
PLB1YMR008C TY1B-MR1Q04214 1755 aa14.57□□□□□ -0.08
PLB1YMR008C TY1B-MR2Q04670 1755 aaKnown RBP14.57□□□□□ -0.08
PLB1YMR008C TY1B-LR1Q12088 1755 aaKnown RBP14.57□□□□□ -0.08
PLB1YMR008C TY1B-NL1Q12112 1755 aa14.57□□□□□ -0.08
PLB1YMR008C TY1B-GR1Q12141 1755 aa14.57□□□□□ -0.08
Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms