RNA–Protein interactions for RNA: YML030W

RCF1, Transcript of Cytochrome c oxidase subunit, yeastyeast

Gene RCF1, Length 480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RCF1YML030W SGS1P35187 1447 aa13.95□□□□□ -0.18
RCF1YML030W INO80P53115 1489 aa13.81□□□□□ -0.2
RCF1YML030W TCB3Q03640 1545 aaKnown RBP13.64□□□□□ -0.23
RCF1YML030W MON2P48563 1636 aaPredicted RBP13.46□□□□□ -0.26
RCF1YML030W TY1B-DR4Q07793 1604 aa13.42□□□□□ -0.26
RCF1YML030W SPA2P23201 1466 aaKnown RBP13.42□□□□□ -0.26
RCF1YML030W SSN2P38931 1420 aa13.31□□□□□ -0.28
RCF1YML030W HSL1P34244 1518 aa13.2□□□□□ -0.3
RCF1YML030W SPT6P23615 1451 aaKnown RBP13.16□□□□□ -0.3
RCF1YML030W SWR1Q05471 1514 aa13.16□□□□□ -0.3
RCF1YML030W HIR3P47171 1648 aa12.95□□□□□ -0.34
RCF1YML030W DRS1P32892 752 aaKnown RBP12.9□□□□□ -0.34
RCF1YML030W XRN1P22147 1528 aaKnown RBP12.83□□□□□ -0.35
RCF1YML030W KOG1P38873 1557 aa12.81□□□□□ -0.36
RCF1YML030W DNA2P38859 1522 aa12.77□□□□□ -0.37
RCF1YML030W REV3P14284 1504 aa12.69□□□□□ -0.38
RCF1YML030W SIN3P22579 1536 aa12.62□□□□□ -0.39
RCF1YML030W THO2P53552 1597 aaKnown RBP12.62□□□□□ -0.39
RCF1YML030W BUD4P47136 1447 aa12.56□□□□□ -0.4
RCF1YML030W SSK2P53599 1579 aa12.53□□□□□ -0.4
RCF1YML030W TAF2P23255 1407 aa12.46□□□□□ -0.41
RCF1YML030W MYO2P19524 1574 aaKnown RBP12.43□□□□□ -0.42
RCF1YML030W ECM5Q03214 1411 aa12.43□□□□□ -0.42
RCF1YML030W ESP1Q03018 1630 aa12.4□□□□□ -0.42
RCF1YML030W ATG2P53855 1592 aa12.39□□□□□ -0.43
RCF1YML030W MDS3P53094 1487 aa12.34□□□□□ -0.43
RCF1YML030W SKI3P17883 1432 aaKnown RBP12.32□□□□□ -0.44
RCF1YML030W PEP1P32319 1579 aa12.26□□□□□ -0.45
RCF1YML030W YPK9Q12697 1472 aa12.24□□□□□ -0.45
RCF1YML030W POL1P13382 1468 aa12.16□□□□□ -0.46
RCF1YML030W SCC2Q04002 1493 aa12.12□□□□□ -0.47
RCF1YML030W STU1P38198 1513 aa12.08□□□□□ -0.48
RCF1YML030W RKR1Q04781 1562 aa12.05□□□□□ -0.48
RCF1YML030W RPO31P04051 1460 aa12.04□□□□□ -0.48
RCF1YML030W CHD1P32657 1468 aa12.02□□□□□ -0.49
RCF1YML030W UFD4P33202 1483 aa12.02□□□□□ -0.49
RCF1YML030W YTA7P40340 1379 aa11.99□□□□□ -0.49
RCF1YML030W YOR1P53049 1477 aa11.99□□□□□ -0.49
RCF1YML030W TOP2P06786 1428 aaKnown RBP11.97□□□□□ -0.49
RCF1YML030W MMS22Q06164 1454 aa11.96□□□□□ -0.49
RCF1YML030W YCF1P39109 1515 aaKnown RBP11.95□□□□□ -0.5
RCF1YML030W BPT1P14772 1559 aa11.94□□□□□ -0.5
RCF1YML030W SMC4Q12267 1418 aa11.93□□□□□ -0.5
RCF1YML030W MYO4P32492 1471 aa11.92□□□□□ -0.5
RCF1YML030W TY2B-LR1P0C2J3 1770 aa11.87□□□□□ -0.51
RCF1YML030W TY2B-FP0CX63 1770 aa11.87□□□□□ -0.51
RCF1YML030W TY2B-GR2P0CX64 1770 aa11.87□□□□□ -0.51
RCF1YML030W TY2B-CP25384 1770 aa11.87□□□□□ -0.51
RCF1YML030W TY2B-DR2Q03494 1770 aa11.87□□□□□ -0.51
RCF1YML030W TY1B-DR1Q03855 1755 aa11.87□□□□□ -0.51
RCF1YML030W TY2B-DR3Q07791 1770 aaKnown RBP11.87□□□□□ -0.51
RCF1YML030W TY2B-OR1Q12113 1770 aa11.87□□□□□ -0.51
RCF1YML030W TY2B-DR1Q12472 1770 aa11.87□□□□□ -0.51
RCF1YML030W TY2B-OR2Q12501 1770 aa11.87□□□□□ -0.51
RCF1YML030W RSE1Q04693 1361 aaKnown RBP11.84□□□□□ -0.51
RCF1YML030W TY1B-DR3Q99231 1755 aa11.79□□□□□ -0.52
RCF1YML030W TY2B-BQ12491 1770 aa11.76□□□□□ -0.53
RCF1YML030W CDC25P04821 1589 aa11.74□□□□□ -0.53
RCF1YML030W SAS10Q12136 610 aaPredicted RBP11.73□□□□□ -0.53
RCF1YML030W RQC2Q12532 1038 aaKnown RBP11.73□□□□□ -0.53
RCF1YML030W SPP41P38904 1435 aa11.72□□□□□ -0.53
RCF1YML030W SNQ2P32568 1501 aaKnown RBP11.7□□□□□ -0.54
RCF1YML030W TY1B-HO13535 1793 aa11.69□□□□□ -0.54
RCF1YML030W TY1B-DR5P0C2I2 1755 aa11.69□□□□□ -0.54
RCF1YML030W TY1B-DR6P0C2I3 1755 aa11.69□□□□□ -0.54
RCF1YML030W TY1B-LR2P0C2I5 1755 aa11.69□□□□□ -0.54
RCF1YML030W TY1B-LR3P0C2I6 1755 aaKnown RBP11.69□□□□□ -0.54
RCF1YML030W TY1B-PR1P0C2I9 1755 aaKnown RBP11.69□□□□□ -0.54
RCF1YML030W TY1B-PR2P0C2J0 1756 aa11.69□□□□□ -0.54
RCF1YML030W TY1B-PR3P0C2J1 1755 aaKnown RBP11.69□□□□□ -0.54
RCF1YML030W TY1B-JR1P47098 1755 aa11.69□□□□□ -0.54
RCF1YML030W TY1B-ML2Q03434 1755 aaKnown RBP11.69□□□□□ -0.54
RCF1YML030W TY1B-ER1Q03612 1755 aa11.69□□□□□ -0.54
RCF1YML030W TY1B-ML1Q04711 1755 aaKnown RBP11.69□□□□□ -0.54
RCF1YML030W TY1B-BRQ12193 1756 aa11.69□□□□□ -0.54
RCF1YML030W TY1B-GR2Q12269 1755 aa11.69□□□□□ -0.54
RCF1YML030W TY1B-OLQ12273 1755 aa11.69□□□□□ -0.54
RCF1YML030W TY1B-GR3Q12316 1755 aa11.69□□□□□ -0.54
RCF1YML030W TY1B-PLQ12414 1755 aaKnown RBP11.69□□□□□ -0.54
RCF1YML030W TY1B-ORQ92393 1755 aa11.69□□□□□ -0.54
RCF1YML030W PAN1P32521 1480 aa11.66□□□□□ -0.54
RCF1YML030W TAF7Q05021 590 aa11.66□□□□□ -0.54
RCF1YML030W MTC1P47018 478 aaKnown RBP11.65□□□□□ -0.54
RCF1YML030W VTH1P40438 1549 aa11.65□□□□□ -0.55
RCF1YML030W VTH2P40890 1549 aa11.65□□□□□ -0.55
RCF1YML030W STH1P32597 1359 aa11.64□□□□□ -0.55
RCF1YML030W MLP2P40457 1679 aa11.63□□□□□ -0.55
RCF1YML030W TSC11P40061 1430 aa11.62□□□□□ -0.55
RCF1YML030W ESC1Q03661 1658 aaKnown RBP11.62□□□□□ -0.55
RCF1YML030W PDR15Q04182 1529 aaKnown RBP11.58□□□□□ -0.56
RCF1YML030W TRM732Q03496 1420 aa11.58□□□□□ -0.56
RCF1YML030W ULS1Q08562 1619 aa11.53□□□□□ -0.56
RCF1YML030W NTE1Q04958 1679 aa11.51□□□□□ -0.57
RCF1YML030W RPA190P10964 1664 aaKnown RBP11.49□□□□□ -0.57
RCF1YML030W DNF1P32660 1571 aa11.49□□□□□ -0.57
RCF1YML030W TY1B-JR2P47100 1755 aaKnown RBP11.49□□□□□ -0.57
RCF1YML030W TY1B-ER2Q03619 1755 aa11.49□□□□□ -0.57
RCF1YML030W TY1B-MR1Q04214 1755 aa11.49□□□□□ -0.57
RCF1YML030W TY1B-MR2Q04670 1755 aaKnown RBP11.49□□□□□ -0.57
RCF1YML030W TY1B-LR1Q12088 1755 aaKnown RBP11.49□□□□□ -0.57
Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms