RNA–Protein interactions for RNA: YLR353W

BUD8, Transcript of Protein involved in bud-site selection, yeastyeast

Gene BUD8, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BUD8YLR353W DRS1P32892 752 aaKnown RBP12.37□□□□□ -0.43
BUD8YLR353W MTC1P47018 478 aaKnown RBP11.83□□□□□ -0.52
BUD8YLR353W MON2P48563 1636 aaPredicted RBP11.47□□□□□ -0.57
BUD8YLR353W INO80P53115 1489 aa11.38□□□□□ -0.59
BUD8YLR353W RSE1Q04693 1361 aaKnown RBP11.14□□□□□ -0.63
BUD8YLR353W BFR2Q06631 534 aaKnown RBP10.92□□□□□ -0.66
BUD8YLR353W DNA2P38859 1522 aa10.86□□□□□ -0.67
BUD8YLR353W TFA1P36100 482 aa10.66□□□□□ -0.7
BUD8YLR353W KOG1P38873 1557 aa10.56□□□□□ -0.72
BUD8YLR353W SPA2P23201 1466 aaKnown RBP10.48□□□□□ -0.73
BUD8YLR353W AVT3P36062 692 aa10.39□□□□□ -0.75
BUD8YLR353W DIP2Q12220 943 aaPredicted RBP10.36□□□□□ -0.75
BUD8YLR353W SWR1Q05471 1514 aa10.34□□□□□ -0.75
BUD8YLR353W MIF2P35201 549 aa10.19□□□□□ -0.78
BUD8YLR353W YFR006WP43590 535 aa9.74□□□□□ -0.85
BUD8YLR353W TY1B-DR4Q07793 1604 aa9.72□□□□□ -0.85
BUD8YLR353W RQC2Q12532 1038 aaKnown RBP9.56□□□□□ -0.88
BUD8YLR353W ISW2Q08773 1120 aa9.5□□□□□ -0.89
BUD8YLR353W TCB3Q03640 1545 aaKnown RBP9.5□□□□□ -0.89
BUD8YLR353W REV3P14284 1504 aa9.42□□□□□ -0.9
BUD8YLR353W ECM5Q03214 1411 aa9.36□□□□□ -0.91
BUD8YLR353W RPG1P38249 964 aaKnown RBP9.34□□□□□ -0.91
BUD8YLR353W RPL17AP05740 184 aaKnown RBP9.24□□□□□ -0.93
BUD8YLR353W RPL17BP46990 184 aaKnown RBP9.24□□□□□ -0.93
BUD8YLR353W MDS3P53094 1487 aa9.23□□□□□ -0.93
BUD8YLR353W PRI1P10363 409 aa9.21□□□□□ -0.94
BUD8YLR353W THO2P53552 1597 aaKnown RBP9.2□□□□□ -0.94
BUD8YLR353W ABP1P15891 592 aaKnown RBP9.15□□□□□ -0.95
BUD8YLR353W BUD4P47136 1447 aa9.15□□□□□ -0.95
BUD8YLR353W BPT1P14772 1559 aa9.12□□□□□ -0.95
BUD8YLR353W FAP1P53971 965 aa9.08□□□□□ -0.96
BUD8YLR353W REB1P21538 810 aa9.08□□□□□ -0.96
BUD8YLR353W SPT6P23615 1451 aaKnown RBP9.05□□□□□ -0.96
BUD8YLR353W HSL1P34244 1518 aa9.04□□□□□ -0.96
BUD8YLR353W BNI1P41832 1953 aa9.04□□□□□ -0.96
BUD8YLR353W PEP1P32319 1579 aa9.04□□□□□ -0.96
BUD8YLR353W MYO2P19524 1574 aaKnown RBP8.99□□□□□ -0.97
BUD8YLR353W SPT21P35209 758 aa8.98□□□□□ -0.97
BUD8YLR353W AAD16Q02895 342 aa8.98□□□□□ -0.97
BUD8YLR353W HIR3P47171 1648 aa8.97□□□□□ -0.97
BUD8YLR353W IRC20Q06554 1556 aa8.96□□□□□ -0.98
BUD8YLR353W RIM101P33400 625 aa8.96□□□□□ -0.98
BUD8YLR353W DMA1P38823 416 aa8.94□□□□□ -0.98
BUD8YLR353W PTP3P40048 928 aa8.92□□□□□ -0.98
BUD8YLR353W YCF1P39109 1515 aaKnown RBP8.92□□□□□ -0.98
BUD8YLR353W DNF1P32660 1571 aa8.91□□□□□ -0.98
BUD8YLR353W LTE1P07866 1435 aa8.88□□□□□ -0.99
BUD8YLR353W RPA190P10964 1664 aaKnown RBP8.87□□□□□ -0.99
BUD8YLR353W CDC25P04821 1589 aa8.83□□□□□ -1
BUD8YLR353W TAF2P23255 1407 aa8.82□□□□□ -1
BUD8YLR353W SSP1P38871 571 aa8.77□□□□□ -1
BUD8YLR353W TSR3Q12094 313 aaKnown RBP8.75□□□□□ -1.01
BUD8YLR353W ITT1Q04638 464 aa8.75□□□□□ -1.01
BUD8YLR353W MMS1Q06211 1407 aa8.75□□□□□ -1.01
BUD8YLR353W ESC1Q03661 1658 aaKnown RBP8.74□□□□□ -1.01
BUD8YLR353W MET5P47169 1442 aa8.73□□□□□ -1.01
BUD8YLR353W ATG2P53855 1592 aa8.69□□□□□ -1.02
BUD8YLR353W OXP1P28273 1286 aa8.68□□□□□ -1.02
BUD8YLR353W SSK2P53599 1579 aa8.68□□□□□ -1.02
BUD8YLR353W GEA2P39993 1459 aaKnown RBP8.68□□□□□ -1.02
BUD8YLR353W RPO31P04051 1460 aa8.63□□□□□ -1.03
BUD8YLR353W YAH1Q12184 172 aaKnown RBP8.59□□□□□ -1.03
BUD8YLR353W ARP8Q12386 881 aaKnown RBP RIP-Chip data8.59□□□□□ -1.03not detected
BUD8YLR353W YOR093CQ12275 1648 aa8.58□□□□□ -1.04
BUD8YLR353W DNF2Q12675 1612 aa8.57□□□□□ -1.04
BUD8YLR353W YKR023WP36119 530 aaKnown RBP8.56□□□□□ -1.04
BUD8YLR353W YIL055CP40523 627 aaKnown RBP8.54□□□□□ -1.04
BUD8YLR353W YLR271WQ06152 274 aa8.54□□□□□ -1.04
BUD8YLR353W TAF7Q05021 590 aa8.52□□□□□ -1.05
BUD8YLR353W RKR1Q04781 1562 aa8.49□□□□□ -1.05
BUD8YLR353W PRY3P47033 881 aa8.47□□□□□ -1.05
BUD8YLR353W LEO1P38439 464 aa8.43□□□□□ -1.06
BUD8YLR353W MGA2P40578 1113 aa8.43□□□□□ -1.06
BUD8YLR353W RSM7P47150 247 aa8.43□□□□□ -1.06
BUD8YLR353W MRPL32P25348 183 aa8.42□□□□□ -1.06
BUD8YLR353W SGS1P35187 1447 aa8.39□□□□□ -1.07
BUD8YLR353W TFC8Q12308 588 aa8.38□□□□□ -1.07
BUD8YLR353W DRS2P39524 1355 aa8.38□□□□□ -1.07
BUD8YLR353W XRN1P22147 1528 aaKnown RBP8.36□□□□□ -1.07
BUD8YLR353W HOP09932 586 aa8.36□□□□□ -1.07
BUD8YLR353W SAS10Q12136 610 aaPredicted RBP8.35□□□□□ -1.07
BUD8YLR353W NTE1Q04958 1679 aa8.34□□□□□ -1.07
BUD8YLR353W CST9Q06032 482 aa8.29□□□□□ -1.08
BUD8YLR353W SKI3P17883 1432 aaKnown RBP8.28□□□□□ -1.08
BUD8YLR353W DCD1P06773 312 aa8.27□□□□□ -1.09
BUD8YLR353W PSD2P53037 1138 aaKnown RBP8.27□□□□□ -1.09
BUD8YLR353W LEU3P08638 886 aa8.26□□□□□ -1.09
BUD8YLR353W CHD1P32657 1468 aa8.26□□□□□ -1.09
BUD8YLR353W CDC27P38042 758 aa8.24□□□□□ -1.09
BUD8YLR353W AI2P03876 854 aa8.24□□□□□ -1.09
BUD8YLR353W UFD4P33202 1483 aa8.23□□□□□ -1.09
BUD8YLR353W TY1B-BRQ12193 1756 aa8.22□□□□□ -1.09
BUD8YLR353W TY1B-GR3Q12316 1755 aa8.22□□□□□ -1.09
BUD8YLR353W TY1B-ORQ92393 1755 aa8.22□□□□□ -1.09
BUD8YLR353W YRF1-1P0CX20 1796 aa8.21□□□□□ -1.1
BUD8YLR353W YRF1-5P0CX21 1796 aa8.21□□□□□ -1.1
BUD8YLR353W YRF1-8P0CX22 1796 aa8.21□□□□□ -1.1
BUD8YLR353W ESP1Q03018 1630 aa8.16□□□□□ -1.1
BUD8YLR353W BCH2P36122 765 aa8.15□□□□□ -1.1
BUD8YLR353W BBC1P47068 1157 aa8.15□□□□□ -1.1
Retrieved 100 of 5,963 RNA–protein pairs in 25.4 ms