RNA–Protein interactions for RNA: YLR338W

OPI9, Transcript of Dubious open reading frame, yeastyeast

Gene OPI9, Length 858 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
OPI9YLR338W SGS1P35187 1447 aa25.12■■□□□ 1.61
OPI9YLR338W INO80P53115 1489 aa24.69■■□□□ 1.54
OPI9YLR338W TCB3Q03640 1545 aaKnown RBP24.43■■□□□ 1.5
OPI9YLR338W MON2P48563 1636 aaPredicted RBP24.2■■□□□ 1.46
OPI9YLR338W TY1B-DR4Q07793 1604 aa24.13■■□□□ 1.45
OPI9YLR338W SPA2P23201 1466 aaKnown RBP23.92■■□□□ 1.42
OPI9YLR338W SSN2P38931 1420 aa23.9■■□□□ 1.42
OPI9YLR338W SWR1Q05471 1514 aa23.69■■□□□ 1.38
OPI9YLR338W HSL1P34244 1518 aa23.66■■□□□ 1.38
OPI9YLR338W SPT6P23615 1451 aaKnown RBP23.6■■□□□ 1.37
OPI9YLR338W HIR3P47171 1648 aa23.23■■□□□ 1.31
OPI9YLR338W DRS1P32892 752 aaKnown RBP23.22■■□□□ 1.31
OPI9YLR338W XRN1P22147 1528 aaKnown RBP23.06■■□□□ 1.28
OPI9YLR338W DNA2P38859 1522 aa23.06■■□□□ 1.28
OPI9YLR338W KOG1P38873 1557 aa22.97■■□□□ 1.27
OPI9YLR338W REV3P14284 1504 aa22.73■■□□□ 1.23
OPI9YLR338W SIN3P22579 1536 aa22.55■■□□□ 1.2
OPI9YLR338W THO2P53552 1597 aaKnown RBP22.53■■□□□ 1.2
OPI9YLR338W BUD4P47136 1447 aa22.5■■□□□ 1.19
OPI9YLR338W TAF2P23255 1407 aa22.46■■□□□ 1.19
OPI9YLR338W ECM5Q03214 1411 aa22.44■■□□□ 1.18
OPI9YLR338W SSK2P53599 1579 aa22.42■■□□□ 1.18
OPI9YLR338W ESP1Q03018 1630 aa22.24■■□□□ 1.15
OPI9YLR338W ATG2P53855 1592 aa22.23■■□□□ 1.15
OPI9YLR338W MYO2P19524 1574 aaKnown RBP22.14■■□□□ 1.13
OPI9YLR338W SKI3P17883 1432 aaKnown RBP22.14■■□□□ 1.13
OPI9YLR338W MDS3P53094 1487 aa22.11■■□□□ 1.13
OPI9YLR338W PEP1P32319 1579 aa22.05■■□□□ 1.12
OPI9YLR338W YPK9Q12697 1472 aa21.92■■□□□ 1.1
OPI9YLR338W POL1P13382 1468 aa21.76■■□□□ 1.07
OPI9YLR338W SCC2Q04002 1493 aa21.73■■□□□ 1.07
OPI9YLR338W STU1P38198 1513 aa21.66■■□□□ 1.06
OPI9YLR338W RPO31P04051 1460 aa21.63■■□□□ 1.05
OPI9YLR338W UFD4P33202 1483 aa21.6■■□□□ 1.05
OPI9YLR338W RKR1Q04781 1562 aa21.57■■□□□ 1.04
OPI9YLR338W YTA7P40340 1379 aa21.47■■□□□ 1.03
OPI9YLR338W TOP2P06786 1428 aaKnown RBP21.46■■□□□ 1.03
OPI9YLR338W YOR1P53049 1477 aa21.46■■□□□ 1.03
OPI9YLR338W YCF1P39109 1515 aaKnown RBP21.45■■□□□ 1.02
OPI9YLR338W BPT1P14772 1559 aa21.44■■□□□ 1.02
OPI9YLR338W CHD1P32657 1468 aa21.43■■□□□ 1.02
OPI9YLR338W RSE1Q04693 1361 aaKnown RBP21.4■■□□□ 1.02
OPI9YLR338W TY2B-LR1P0C2J3 1770 aa21.36■■□□□ 1.01
OPI9YLR338W TY2B-FP0CX63 1770 aa21.36■■□□□ 1.01
OPI9YLR338W TY2B-GR2P0CX64 1770 aa21.36■■□□□ 1.01
OPI9YLR338W TY2B-CP25384 1770 aa21.36■■□□□ 1.01
OPI9YLR338W TY2B-DR2Q03494 1770 aa21.36■■□□□ 1.01
OPI9YLR338W TY1B-DR1Q03855 1755 aa21.36■■□□□ 1.01
OPI9YLR338W TY2B-DR3Q07791 1770 aaKnown RBP21.36■■□□□ 1.01
OPI9YLR338W TY2B-OR1Q12113 1770 aa21.36■■□□□ 1.01
OPI9YLR338W TY2B-DR1Q12472 1770 aa21.36■■□□□ 1.01
OPI9YLR338W TY2B-OR2Q12501 1770 aa21.36■■□□□ 1.01
OPI9YLR338W MMS22Q06164 1454 aa21.36■■□□□ 1.01
OPI9YLR338W SMC4Q12267 1418 aa21.35■■□□□ 1.01
OPI9YLR338W MYO4P32492 1471 aa21.25■□□□□ 0.99
OPI9YLR338W TY1B-DR3Q99231 1755 aa21.23■□□□□ 0.99
OPI9YLR338W TY2B-BQ12491 1770 aa21.17■□□□□ 0.98
OPI9YLR338W SAS10Q12136 610 aaPredicted RBP21.14■□□□□ 0.97
OPI9YLR338W RQC2Q12532 1038 aaKnown RBP21.13■□□□□ 0.97
OPI9YLR338W TY1B-BRQ12193 1756 aa21.08■□□□□ 0.96
OPI9YLR338W TY1B-GR3Q12316 1755 aa21.08■□□□□ 0.96
OPI9YLR338W TY1B-ORQ92393 1755 aa21.08■□□□□ 0.96
OPI9YLR338W MTC1P47018 478 aaKnown RBP21.05■□□□□ 0.96
OPI9YLR338W CDC25P04821 1589 aa21.04■□□□□ 0.96
OPI9YLR338W TY1B-HO13535 1793 aa21.04■□□□□ 0.96
OPI9YLR338W TY1B-DR5P0C2I2 1755 aa21.04■□□□□ 0.96
OPI9YLR338W TY1B-DR6P0C2I3 1755 aa21.04■□□□□ 0.96
OPI9YLR338W TY1B-LR2P0C2I5 1755 aa21.04■□□□□ 0.96
OPI9YLR338W TY1B-LR3P0C2I6 1755 aaKnown RBP21.04■□□□□ 0.96
OPI9YLR338W TY1B-PR1P0C2I9 1755 aaKnown RBP21.04■□□□□ 0.96
OPI9YLR338W TY1B-PR2P0C2J0 1756 aa21.04■□□□□ 0.96
OPI9YLR338W TY1B-PR3P0C2J1 1755 aaKnown RBP21.04■□□□□ 0.96
OPI9YLR338W TY1B-JR1P47098 1755 aa21.04■□□□□ 0.96
OPI9YLR338W TY1B-ML2Q03434 1755 aaKnown RBP21.04■□□□□ 0.96
OPI9YLR338W TY1B-ER1Q03612 1755 aa21.04■□□□□ 0.96
OPI9YLR338W TY1B-ML1Q04711 1755 aaKnown RBP21.04■□□□□ 0.96
OPI9YLR338W TY1B-GR2Q12269 1755 aa21.04■□□□□ 0.96
OPI9YLR338W TY1B-OLQ12273 1755 aa21.04■□□□□ 0.96
OPI9YLR338W TY1B-PLQ12414 1755 aaKnown RBP21.04■□□□□ 0.96
OPI9YLR338W SPP41P38904 1435 aa21.01■□□□□ 0.95
OPI9YLR338W SNQ2P32568 1501 aaKnown RBP20.94■□□□□ 0.94
OPI9YLR338W PAN1P32521 1480 aa20.94■□□□□ 0.94
OPI9YLR338W STH1P32597 1359 aa20.91■□□□□ 0.94
OPI9YLR338W TAF7Q05021 590 aa20.9■□□□□ 0.94
OPI9YLR338W TSC11P40061 1430 aa20.84■□□□□ 0.93
OPI9YLR338W VTH1P40438 1549 aa20.83■□□□□ 0.92
OPI9YLR338W VTH2P40890 1549 aa20.83■□□□□ 0.92
OPI9YLR338W ESC1Q03661 1658 aaKnown RBP20.8■□□□□ 0.92
OPI9YLR338W MLP2P40457 1679 aa20.79■□□□□ 0.92
OPI9YLR338W TRM732Q03496 1420 aa20.72■□□□□ 0.91
OPI9YLR338W PDR15Q04182 1529 aaKnown RBP20.72■□□□□ 0.91
OPI9YLR338W DNF1P32660 1571 aa20.7■□□□□ 0.9
OPI9YLR338W TY1B-JR2P47100 1755 aaKnown RBP20.68■□□□□ 0.9
OPI9YLR338W TY1B-ER2Q03619 1755 aa20.68■□□□□ 0.9
OPI9YLR338W TY1B-MR1Q04214 1755 aa20.68■□□□□ 0.9
OPI9YLR338W TY1B-MR2Q04670 1755 aaKnown RBP20.68■□□□□ 0.9
OPI9YLR338W TY1B-LR1Q12088 1755 aaKnown RBP20.68■□□□□ 0.9
OPI9YLR338W TY1B-NL1Q12112 1755 aa20.68■□□□□ 0.9
OPI9YLR338W TY1B-GR1Q12141 1755 aa20.68■□□□□ 0.9
OPI9YLR338W TY1B-BLQ12490 1755 aa20.68■□□□□ 0.9
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms