RNA–Protein interactions for RNA: YLR247C

IRC20, Transcript of E3 ubiquitin ligase and putative helicase, yeastyeast

Gene IRC20, Length 4,671 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
IRC20YLR247C MON2P48563 1636 aaPredicted RBP5.1□□□□□ -1.59
IRC20YLR247C TY1B-DR4Q07793 1604 aa4.7□□□□□ -1.66
IRC20YLR247C INO80P53115 1489 aa4.64□□□□□ -1.67
IRC20YLR247C SWR1Q05471 1514 aa4.64□□□□□ -1.67
IRC20YLR247C KOG1P38873 1557 aa4.59□□□□□ -1.67
IRC20YLR247C DNA2P38859 1522 aa4.59□□□□□ -1.68
IRC20YLR247C TCB3Q03640 1545 aaKnown RBP4.48□□□□□ -1.69
IRC20YLR247C THO2P53552 1597 aaKnown RBP4.32□□□□□ -1.72
IRC20YLR247C SPA2P23201 1466 aaKnown RBP4.3□□□□□ -1.72
IRC20YLR247C HSL1P34244 1518 aa4.27□□□□□ -1.73
IRC20YLR247C PEP1P32319 1579 aa4.26□□□□□ -1.73
IRC20YLR247C SSK2P53599 1579 aa4.2□□□□□ -1.74
IRC20YLR247C RSE1Q04693 1361 aaKnown RBP4.18□□□□□ -1.74
IRC20YLR247C HIR3P47171 1648 aa4.16□□□□□ -1.74
IRC20YLR247C SPT6P23615 1451 aaKnown RBP4.16□□□□□ -1.74
IRC20YLR247C REV3P14284 1504 aa4.16□□□□□ -1.74
IRC20YLR247C ATG2P53855 1592 aa4.16□□□□□ -1.74
IRC20YLR247C MDS3P53094 1487 aa4.14□□□□□ -1.75
IRC20YLR247C BUD4P47136 1447 aa4.09□□□□□ -1.75
IRC20YLR247C SIN3P22579 1536 aa4.07□□□□□ -1.76
IRC20YLR247C MYO2P19524 1574 aaKnown RBP4.05□□□□□ -1.76
IRC20YLR247C TY1B-BRQ12193 1756 aa4.03□□□□□ -1.76
IRC20YLR247C TY1B-GR3Q12316 1755 aa4.03□□□□□ -1.76
IRC20YLR247C TY1B-ORQ92393 1755 aa4.03□□□□□ -1.76
IRC20YLR247C BNI1P41832 1953 aa4.03□□□□□ -1.76
IRC20YLR247C SGS1P35187 1447 aa4.02□□□□□ -1.77
IRC20YLR247C ECM5Q03214 1411 aa4.02□□□□□ -1.77
IRC20YLR247C BPT1P14772 1559 aa4.02□□□□□ -1.77
IRC20YLR247C IRC20Q06554 1556 aa3.99□□□□□ -1.77
IRC20YLR247C TY2B-LR1P0C2J3 1770 aa3.98□□□□□ -1.77
IRC20YLR247C TY2B-FP0CX63 1770 aa3.98□□□□□ -1.77
IRC20YLR247C TY2B-GR2P0CX64 1770 aa3.98□□□□□ -1.77
IRC20YLR247C TY2B-CP25384 1770 aa3.98□□□□□ -1.77
IRC20YLR247C TY2B-DR2Q03494 1770 aa3.98□□□□□ -1.77
IRC20YLR247C TY1B-DR1Q03855 1755 aa3.98□□□□□ -1.77
IRC20YLR247C TY2B-DR3Q07791 1770 aaKnown RBP3.98□□□□□ -1.77
IRC20YLR247C TY2B-OR1Q12113 1770 aa3.98□□□□□ -1.77
IRC20YLR247C TY2B-DR1Q12472 1770 aa3.98□□□□□ -1.77
IRC20YLR247C TY2B-OR2Q12501 1770 aa3.98□□□□□ -1.77
IRC20YLR247C YCF1P39109 1515 aaKnown RBP3.98□□□□□ -1.77
IRC20YLR247C TY1B-HO13535 1793 aa3.96□□□□□ -1.78
IRC20YLR247C TY1B-DR5P0C2I2 1755 aa3.96□□□□□ -1.78
IRC20YLR247C TY1B-DR6P0C2I3 1755 aa3.96□□□□□ -1.78
IRC20YLR247C TY1B-LR2P0C2I5 1755 aa3.96□□□□□ -1.78
IRC20YLR247C TY1B-LR3P0C2I6 1755 aaKnown RBP3.96□□□□□ -1.78
IRC20YLR247C TY1B-PR1P0C2I9 1755 aaKnown RBP3.96□□□□□ -1.78
IRC20YLR247C TY1B-PR2P0C2J0 1756 aa3.96□□□□□ -1.78
IRC20YLR247C TY1B-PR3P0C2J1 1755 aaKnown RBP3.96□□□□□ -1.78
IRC20YLR247C TY1B-JR1P47098 1755 aa3.96□□□□□ -1.78
IRC20YLR247C TY1B-ML2Q03434 1755 aaKnown RBP3.96□□□□□ -1.78
IRC20YLR247C TY1B-ER1Q03612 1755 aa3.96□□□□□ -1.78
IRC20YLR247C TY1B-ML1Q04711 1755 aaKnown RBP3.96□□□□□ -1.78
IRC20YLR247C TY1B-GR2Q12269 1755 aa3.96□□□□□ -1.78
IRC20YLR247C TY1B-OLQ12273 1755 aa3.96□□□□□ -1.78
IRC20YLR247C TY1B-PLQ12414 1755 aaKnown RBP3.96□□□□□ -1.78
IRC20YLR247C RPA190P10964 1664 aaKnown RBP3.95□□□□□ -1.78
IRC20YLR247C MTC1P47018 478 aaKnown RBP3.95□□□□□ -1.78
IRC20YLR247C ESP1Q03018 1630 aa3.94□□□□□ -1.78
IRC20YLR247C TY2B-BQ12491 1770 aa3.93□□□□□ -1.78
IRC20YLR247C CDC25P04821 1589 aa3.92□□□□□ -1.78
IRC20YLR247C ESC1Q03661 1658 aaKnown RBP3.91□□□□□ -1.78
IRC20YLR247C TY1B-DR3Q99231 1755 aa3.91□□□□□ -1.78
IRC20YLR247C MET5P47169 1442 aa3.91□□□□□ -1.78
IRC20YLR247C DNF1P32660 1571 aa3.89□□□□□ -1.79
IRC20YLR247C RKR1Q04781 1562 aa3.88□□□□□ -1.79
IRC20YLR247C YRF1-1P0CX20 1796 aa3.88□□□□□ -1.79
IRC20YLR247C YRF1-5P0CX21 1796 aa3.88□□□□□ -1.79
IRC20YLR247C YRF1-8P0CX22 1796 aa3.88□□□□□ -1.79
IRC20YLR247C XRN1P22147 1528 aaKnown RBP3.86□□□□□ -1.79
IRC20YLR247C LTE1P07866 1435 aa3.85□□□□□ -1.79
IRC20YLR247C TY1B-JR2P47100 1755 aaKnown RBP3.84□□□□□ -1.79
IRC20YLR247C TY1B-ER2Q03619 1755 aa3.84□□□□□ -1.79
IRC20YLR247C TY1B-MR1Q04214 1755 aa3.84□□□□□ -1.79
IRC20YLR247C TY1B-MR2Q04670 1755 aaKnown RBP3.84□□□□□ -1.79
IRC20YLR247C TY1B-LR1Q12088 1755 aaKnown RBP3.84□□□□□ -1.79
IRC20YLR247C TY1B-NL1Q12112 1755 aa3.84□□□□□ -1.79
IRC20YLR247C TY1B-GR1Q12141 1755 aa3.84□□□□□ -1.79
IRC20YLR247C TY1B-BLQ12490 1755 aa3.84□□□□□ -1.79
IRC20YLR247C RPO31P04051 1460 aa3.83□□□□□ -1.8
IRC20YLR247C DNF2Q12675 1612 aa3.82□□□□□ -1.8
IRC20YLR247C YPK9Q12697 1472 aa3.81□□□□□ -1.8
IRC20YLR247C SCC2Q04002 1493 aa3.81□□□□□ -1.8
IRC20YLR247C RPO21P04050 1733 aaKnown RBP3.79□□□□□ -1.8
IRC20YLR247C NTE1Q04958 1679 aa3.78□□□□□ -1.8
IRC20YLR247C DRS1P32892 752 aaKnown RBP3.78□□□□□ -1.8
IRC20YLR247C MIF2P35201 549 aa3.77□□□□□ -1.81
IRC20YLR247C FAP1P53971 965 aa3.76□□□□□ -1.81
IRC20YLR247C YOR093CQ12275 1648 aa3.75□□□□□ -1.81
IRC20YLR247C CHD1P32657 1468 aa3.75□□□□□ -1.81
IRC20YLR247C SPO14P36126 1683 aa3.75□□□□□ -1.81
IRC20YLR247C PAN1P32521 1480 aa3.73□□□□□ -1.81
IRC20YLR247C TAF2P23255 1407 aa3.71□□□□□ -1.82
IRC20YLR247C GEA2P39993 1459 aaKnown RBP3.7□□□□□ -1.82
IRC20YLR247C UFD4P33202 1483 aa3.7□□□□□ -1.82
IRC20YLR247C DOP1Q03921 1698 aa3.7□□□□□ -1.82
IRC20YLR247C SSN2P38931 1420 aa3.64□□□□□ -1.83
IRC20YLR247C CHC1P22137 1653 aaKnown RBP3.64□□□□□ -1.83
IRC20YLR247C TOP2P06786 1428 aaKnown RBP3.63□□□□□ -1.83
IRC20YLR247C PDR12Q02785 1511 aa3.61□□□□□ -1.83
IRC20YLR247C VPS15P22219 1454 aa3.61□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 42.1 ms