RNA–Protein interactions for RNA: YLR196W

PWP1, Transcript of Protein with WD-40 repeats involved in rRNA processing, yeastyeast

Gene PWP1, Length 1,731 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PWP1YLR196W RQC2Q12532 1038 aaKnown RBP8.78□□□□□ -1
PWP1YLR196W MTC1P47018 478 aaKnown RBP8.73□□□□□ -1.01
PWP1YLR196W DRS1P32892 752 aaKnown RBP8.51□□□□□ -1.05
PWP1YLR196W BFR2Q06631 534 aaKnown RBP8.51□□□□□ -1.05
PWP1YLR196W TAF7Q05021 590 aa8.05□□□□□ -1.12
PWP1YLR196W URN1Q06525 465 aaKnown RBP7.91□□□□□ -1.14
PWP1YLR196W SGS1P35187 1447 aa7.83□□□□□ -1.16
PWP1YLR196W SPA2P23201 1466 aaKnown RBP7.76□□□□□ -1.17
PWP1YLR196W SSN2P38931 1420 aa7.66□□□□□ -1.18
PWP1YLR196W INO80P53115 1489 aa7.57□□□□□ -1.2
PWP1YLR196W SIS2P36024 562 aa7.55□□□□□ -1.2
PWP1YLR196W EBP2P36049 427 aaKnown RBP7.54□□□□□ -1.2
PWP1YLR196W TFA1P36100 482 aa7.51□□□□□ -1.21
PWP1YLR196W CAB3P36076 571 aa7.47□□□□□ -1.21
PWP1YLR196W FAP1P53971 965 aa7.46□□□□□ -1.22
PWP1YLR196W NOP2P40991 618 aaKnown RBP7.43□□□□□ -1.22
PWP1YLR196W TCB3Q03640 1545 aaKnown RBP7.37□□□□□ -1.23
PWP1YLR196W TY1B-DR4Q07793 1604 aa7.35□□□□□ -1.23
PWP1YLR196W DIP2Q12220 943 aaPredicted RBP7.34□□□□□ -1.23
PWP1YLR196W YFR016CP43597 1233 aaKnown RBP7.32□□□□□ -1.24
PWP1YLR196W HSL1P34244 1518 aa7.26□□□□□ -1.25
PWP1YLR196W YRB30P53107 440 aaPredicted RBP7.22□□□□□ -1.25
PWP1YLR196W AVT3P36062 692 aa7.21□□□□□ -1.26
PWP1YLR196W ISW2Q08773 1120 aa7.2□□□□□ -1.26
PWP1YLR196W SPT6P23615 1451 aaKnown RBP7.19□□□□□ -1.26
PWP1YLR196W RPS0BP46654 252 aaKnown RBP7.19□□□□□ -1.26
PWP1YLR196W SKI3P17883 1432 aaKnown RBP7.17□□□□□ -1.26
PWP1YLR196W PRI1P10363 409 aa7.15□□□□□ -1.26
PWP1YLR196W HIR3P47171 1648 aa7.14□□□□□ -1.27
PWP1YLR196W XRN1P22147 1528 aaKnown RBP7.12□□□□□ -1.27
PWP1YLR196W NAP1P25293 417 aaKnown RBP7.11□□□□□ -1.27
PWP1YLR196W KRI1P42846 591 aaKnown RBP7.1□□□□□ -1.27
PWP1YLR196W IOC4Q04213 475 aa7.1□□□□□ -1.27
PWP1YLR196W AAD16Q02895 342 aa7.09□□□□□ -1.27
PWP1YLR196W REV3P14284 1504 aa7.07□□□□□ -1.28
PWP1YLR196W THO2P53552 1597 aaKnown RBP7.07□□□□□ -1.28
PWP1YLR196W RPG1P38249 964 aaKnown RBP7.07□□□□□ -1.28
PWP1YLR196W MMS22Q06164 1454 aa7.04□□□□□ -1.28
PWP1YLR196W SIN3P22579 1536 aa7.03□□□□□ -1.28
PWP1YLR196W SSK2P53599 1579 aa7.02□□□□□ -1.28
PWP1YLR196W CHD1P32657 1468 aa7.02□□□□□ -1.29
PWP1YLR196W RSE1Q04693 1361 aaKnown RBP7.01□□□□□ -1.29
PWP1YLR196W YPR148CQ06523 435 aa7.01□□□□□ -1.29
PWP1YLR196W SWR1Q05471 1514 aa7□□□□□ -1.29
PWP1YLR196W MON2P48563 1636 aaPredicted RBP6.99□□□□□ -1.29
PWP1YLR196W NSR1P27476 414 aaKnown RBP RIP-Chip data6.98□□□□□ -1.29not detected
PWP1YLR196W ESP1Q03018 1630 aa6.97□□□□□ -1.29
PWP1YLR196W PRY3P47033 881 aa6.97□□□□□ -1.29
PWP1YLR196W CWC22P53333 577 aaKnown RBP6.96□□□□□ -1.3
PWP1YLR196W TAF2P23255 1407 aa6.95□□□□□ -1.3
PWP1YLR196W MYO2P19524 1574 aaKnown RBP6.94□□□□□ -1.3
PWP1YLR196W MNN4P36044 1178 aa6.93□□□□□ -1.3
PWP1YLR196W AIM44Q99299 758 aa6.93□□□□□ -1.3
PWP1YLR196W LEO1P38439 464 aa6.9□□□□□ -1.3
PWP1YLR196W STU1P38198 1513 aa6.89□□□□□ -1.31
PWP1YLR196W BPT1P14772 1559 aa6.86□□□□□ -1.31
PWP1YLR196W POL1P13382 1468 aa6.86□□□□□ -1.31
PWP1YLR196W UFD4P33202 1483 aa6.86□□□□□ -1.31
PWP1YLR196W DEF1P35732 738 aaKnown RBP6.83□□□□□ -1.32
PWP1YLR196W ATG2P53855 1592 aa6.82□□□□□ -1.32
PWP1YLR196W TRM732Q03496 1420 aa6.81□□□□□ -1.32
PWP1YLR196W SNU71P53207 620 aaKnown RBP6.8□□□□□ -1.32
PWP1YLR196W TCB2P48231 1178 aa6.79□□□□□ -1.32
PWP1YLR196W DMA1P38823 416 aa6.79□□□□□ -1.32
PWP1YLR196W RKR1Q04781 1562 aa6.78□□□□□ -1.32
PWP1YLR196W ENV11P53246 860 aa6.78□□□□□ -1.32
PWP1YLR196W SCC2Q04002 1493 aa6.77□□□□□ -1.33
PWP1YLR196W SAS10Q12136 610 aaPredicted RBP6.77□□□□□ -1.33
PWP1YLR196W YPK9Q12697 1472 aa6.77□□□□□ -1.33
PWP1YLR196W YTA7P40340 1379 aa6.76□□□□□ -1.33
PWP1YLR196W TSR3Q12094 313 aaKnown RBP6.76□□□□□ -1.33
PWP1YLR196W NUG1P40010 520 aaKnown RBP6.75□□□□□ -1.33
PWP1YLR196W BUD4P47136 1447 aa6.75□□□□□ -1.33
PWP1YLR196W TOP1P04786 769 aa6.74□□□□□ -1.33
PWP1YLR196W RPL17AP05740 184 aaKnown RBP6.74□□□□□ -1.33
PWP1YLR196W RPL17BP46990 184 aaKnown RBP6.74□□□□□ -1.33
PWP1YLR196W PSH1Q12161 406 aa6.74□□□□□ -1.33
PWP1YLR196W ECM5Q03214 1411 aa6.74□□□□□ -1.33
PWP1YLR196W YOR1P53049 1477 aa6.73□□□□□ -1.33
PWP1YLR196W NOP53Q12080 455 aaKnown RBP6.73□□□□□ -1.33
PWP1YLR196W DNA2P38859 1522 aa6.73□□□□□ -1.33
PWP1YLR196W RLF2Q12495 606 aa6.73□□□□□ -1.33
PWP1YLR196W MYO4P32492 1471 aa6.72□□□□□ -1.33
PWP1YLR196W MLP2P40457 1679 aa6.71□□□□□ -1.33
PWP1YLR196W REB1P21538 810 aa6.71□□□□□ -1.34
PWP1YLR196W MDG1P53885 366 aa6.71□□□□□ -1.34
PWP1YLR196W TY1B-DR3Q99231 1755 aa6.7□□□□□ -1.34
PWP1YLR196W IFH1P39520 1085 aa6.7□□□□□ -1.34
PWP1YLR196W TY2B-LR1P0C2J3 1770 aa6.69□□□□□ -1.34
PWP1YLR196W TY2B-FP0CX63 1770 aa6.69□□□□□ -1.34
PWP1YLR196W TY2B-GR2P0CX64 1770 aa6.69□□□□□ -1.34
PWP1YLR196W TY2B-CP25384 1770 aa6.69□□□□□ -1.34
PWP1YLR196W TY2B-DR2Q03494 1770 aa6.69□□□□□ -1.34
PWP1YLR196W TY1B-DR1Q03855 1755 aa6.69□□□□□ -1.34
PWP1YLR196W TY2B-DR3Q07791 1770 aaKnown RBP6.69□□□□□ -1.34
PWP1YLR196W TY2B-OR1Q12113 1770 aa6.69□□□□□ -1.34
PWP1YLR196W TY2B-DR1Q12472 1770 aa6.69□□□□□ -1.34
PWP1YLR196W TY2B-OR2Q12501 1770 aa6.69□□□□□ -1.34
PWP1YLR196W IKI3Q06706 1349 aaKnown RBP6.69□□□□□ -1.34
PWP1YLR196W NUP170P38181 1502 aa6.69□□□□□ -1.34
Retrieved 100 of 5,963 RNA–protein pairs in 14 ms