RNA–Protein interactions for RNA: YLR018C

POM34, Transcript of Subunit of the transmembrane ring of the nuclear pore complex (NPC), yeastyeast

Gene POM34, Length 900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
POM34YLR018C SGS1P35187 1447 aa18.3■□□□□ 0.52
POM34YLR018C INO80P53115 1489 aa18.04■□□□□ 0.48
POM34YLR018C MON2P48563 1636 aaPredicted RBP17.98■□□□□ 0.47
POM34YLR018C TCB3Q03640 1545 aaKnown RBP17.89■□□□□ 0.45
POM34YLR018C TY1B-DR4Q07793 1604 aa17.68■□□□□ 0.42
POM34YLR018C SWR1Q05471 1514 aa17.52■□□□□ 0.39
POM34YLR018C HSL1P34244 1518 aa17.3■□□□□ 0.36
POM34YLR018C SPT6P23615 1451 aaKnown RBP17.29■□□□□ 0.36
POM34YLR018C SSN2P38931 1420 aa17.25■□□□□ 0.35
POM34YLR018C DNA2P38859 1522 aa17.2■□□□□ 0.34
POM34YLR018C SPA2P23201 1466 aaKnown RBP17.19■□□□□ 0.34
POM34YLR018C KOG1P38873 1557 aa17.02■□□□□ 0.31
POM34YLR018C HIR3P47171 1648 aa16.99■□□□□ 0.31
POM34YLR018C XRN1P22147 1528 aaKnown RBP16.85■□□□□ 0.29
POM34YLR018C DRS1P32892 752 aaKnown RBP16.8■□□□□ 0.28
POM34YLR018C ECM5Q03214 1411 aa16.61■□□□□ 0.25
POM34YLR018C REV3P14284 1504 aa16.55■□□□□ 0.24
POM34YLR018C BUD4P47136 1447 aa16.54■□□□□ 0.24
POM34YLR018C THO2P53552 1597 aaKnown RBP16.51■□□□□ 0.23
POM34YLR018C TAF2P23255 1407 aa16.45■□□□□ 0.22
POM34YLR018C SIN3P22579 1536 aa16.36■□□□□ 0.21
POM34YLR018C MDS3P53094 1487 aa16.28■□□□□ 0.2
POM34YLR018C SSK2P53599 1579 aa16.26■□□□□ 0.19
POM34YLR018C ATG2P53855 1592 aa16.26■□□□□ 0.19
POM34YLR018C SKI3P17883 1432 aaKnown RBP16.24■□□□□ 0.19
POM34YLR018C PEP1P32319 1579 aa16.21■□□□□ 0.18
POM34YLR018C RSE1Q04693 1361 aaKnown RBP16.15■□□□□ 0.18
POM34YLR018C ESP1Q03018 1630 aa16.15■□□□□ 0.18
POM34YLR018C MYO2P19524 1574 aaKnown RBP16.02■□□□□ 0.16
POM34YLR018C YPK9Q12697 1472 aa15.95■□□□□ 0.14
POM34YLR018C SCC2Q04002 1493 aa15.86■□□□□ 0.13
POM34YLR018C UFD4P33202 1483 aa15.84■□□□□ 0.13
POM34YLR018C BPT1P14772 1559 aa15.8■□□□□ 0.12
POM34YLR018C MTC1P47018 478 aaKnown RBP15.8■□□□□ 0.12
POM34YLR018C RPO31P04051 1460 aa15.78■□□□□ 0.12
POM34YLR018C POL1P13382 1468 aa15.75■□□□□ 0.11
POM34YLR018C STU1P38198 1513 aa15.7■□□□□ 0.1
POM34YLR018C RKR1Q04781 1562 aa15.65■□□□□ 0.1
POM34YLR018C TOP2P06786 1428 aaKnown RBP15.64■□□□□ 0.09
POM34YLR018C YCF1P39109 1515 aaKnown RBP15.63■□□□□ 0.09
POM34YLR018C RQC2Q12532 1038 aaKnown RBP15.59■□□□□ 0.09
POM34YLR018C YOR1P53049 1477 aa15.56■□□□□ 0.08
POM34YLR018C TY2B-LR1P0C2J3 1770 aa15.55■□□□□ 0.08
POM34YLR018C TY2B-FP0CX63 1770 aa15.55■□□□□ 0.08
POM34YLR018C TY2B-GR2P0CX64 1770 aa15.55■□□□□ 0.08
POM34YLR018C TY2B-CP25384 1770 aa15.55■□□□□ 0.08
POM34YLR018C TY2B-DR2Q03494 1770 aa15.55■□□□□ 0.08
POM34YLR018C TY1B-DR1Q03855 1755 aa15.55■□□□□ 0.08
POM34YLR018C TY2B-DR3Q07791 1770 aaKnown RBP15.55■□□□□ 0.08
POM34YLR018C TY2B-OR1Q12113 1770 aa15.55■□□□□ 0.08
POM34YLR018C TY2B-DR1Q12472 1770 aa15.55■□□□□ 0.08
POM34YLR018C TY2B-OR2Q12501 1770 aa15.55■□□□□ 0.08
POM34YLR018C SMC4Q12267 1418 aa15.5■□□□□ 0.07
POM34YLR018C YTA7P40340 1379 aa15.49■□□□□ 0.07
POM34YLR018C CHD1P32657 1468 aa15.46■□□□□ 0.07
POM34YLR018C TY1B-DR3Q99231 1755 aa15.41■□□□□ 0.06
POM34YLR018C CDC25P04821 1589 aa15.41■□□□□ 0.06
POM34YLR018C TY2B-BQ12491 1770 aa15.39■□□□□ 0.05
POM34YLR018C TY1B-BRQ12193 1756 aa15.38■□□□□ 0.05
POM34YLR018C TY1B-GR3Q12316 1755 aa15.38■□□□□ 0.05
POM34YLR018C TY1B-ORQ92393 1755 aa15.38■□□□□ 0.05
POM34YLR018C MMS22Q06164 1454 aa15.38■□□□□ 0.05
POM34YLR018C PAN1P32521 1480 aa15.35■□□□□ 0.05
POM34YLR018C MYO4P32492 1471 aa15.33■□□□□ 0.04
POM34YLR018C SPP41P38904 1435 aa15.32■□□□□ 0.04
POM34YLR018C SAS10Q12136 610 aaPredicted RBP15.31■□□□□ 0.04
POM34YLR018C TY1B-HO13535 1793 aa15.31■□□□□ 0.04
POM34YLR018C TY1B-DR5P0C2I2 1755 aa15.31■□□□□ 0.04
POM34YLR018C TY1B-DR6P0C2I3 1755 aa15.31■□□□□ 0.04
POM34YLR018C TY1B-LR2P0C2I5 1755 aa15.31■□□□□ 0.04
POM34YLR018C TY1B-LR3P0C2I6 1755 aaKnown RBP15.31■□□□□ 0.04
POM34YLR018C TY1B-PR1P0C2I9 1755 aaKnown RBP15.31■□□□□ 0.04
POM34YLR018C TY1B-PR2P0C2J0 1756 aa15.31■□□□□ 0.04
POM34YLR018C TY1B-PR3P0C2J1 1755 aaKnown RBP15.31■□□□□ 0.04
POM34YLR018C TY1B-JR1P47098 1755 aa15.31■□□□□ 0.04
POM34YLR018C TY1B-ML2Q03434 1755 aaKnown RBP15.31■□□□□ 0.04
POM34YLR018C TY1B-ER1Q03612 1755 aa15.31■□□□□ 0.04
POM34YLR018C TY1B-ML1Q04711 1755 aaKnown RBP15.31■□□□□ 0.04
POM34YLR018C TY1B-GR2Q12269 1755 aa15.31■□□□□ 0.04
POM34YLR018C TY1B-OLQ12273 1755 aa15.31■□□□□ 0.04
POM34YLR018C TY1B-PLQ12414 1755 aaKnown RBP15.31■□□□□ 0.04
POM34YLR018C DNF1P32660 1571 aa15.24■□□□□ 0.03
POM34YLR018C ESC1Q03661 1658 aaKnown RBP15.22■□□□□ 0.03
POM34YLR018C TSC11P40061 1430 aa15.2■□□□□ 0.02
POM34YLR018C TRM732Q03496 1420 aa15.18■□□□□ 0.02
POM34YLR018C VTH1P40438 1549 aa15.16■□□□□ 0.02
POM34YLR018C VTH2P40890 1549 aa15.16■□□□□ 0.02
POM34YLR018C STH1P32597 1359 aa15.15■□□□□ 0.02
POM34YLR018C SNQ2P32568 1501 aaKnown RBP15.14■□□□□ 0.01
POM34YLR018C RPA190P10964 1664 aaKnown RBP15.12■□□□□ 0.01
POM34YLR018C TAF7Q05021 590 aa15.08■□□□□ 0
POM34YLR018C TY1B-JR2P47100 1755 aaKnown RBP15.04■□□□□ -0
POM34YLR018C TY1B-ER2Q03619 1755 aa15.04■□□□□ -0
POM34YLR018C TY1B-MR1Q04214 1755 aa15.04■□□□□ -0
POM34YLR018C TY1B-MR2Q04670 1755 aaKnown RBP15.04■□□□□ -0
POM34YLR018C TY1B-LR1Q12088 1755 aaKnown RBP15.04■□□□□ -0
POM34YLR018C TY1B-NL1Q12112 1755 aa15.04■□□□□ -0
POM34YLR018C TY1B-GR1Q12141 1755 aa15.04■□□□□ -0
POM34YLR018C TY1B-BLQ12490 1755 aa15.04■□□□□ -0
POM34YLR018C MET5P47169 1442 aa15.03■□□□□ -0
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms