RNA–Protein interactions for RNA: YLL049W

LDB18, Transcript of Component of the dynactin complex, yeastyeast

Gene LDB18, Length 540 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDB18YLL049W MON2P48563 1636 aaPredicted RBP12.55□□□□□ -0.4
LDB18YLL049W INO80P53115 1489 aa12.47□□□□□ -0.41
LDB18YLL049W DNA2P38859 1522 aa11.93□□□□□ -0.5
LDB18YLL049W SWR1Q05471 1514 aa11.76□□□□□ -0.53
LDB18YLL049W KOG1P38873 1557 aa11.67□□□□□ -0.54
LDB18YLL049W RSE1Q04693 1361 aaKnown RBP11.63□□□□□ -0.55
LDB18YLL049W TY1B-DR4Q07793 1604 aa11.52□□□□□ -0.57
LDB18YLL049W TCB3Q03640 1545 aaKnown RBP11.45□□□□□ -0.58
LDB18YLL049W SPA2P23201 1466 aaKnown RBP11.09□□□□□ -0.63
LDB18YLL049W SGS1P35187 1447 aa10.99□□□□□ -0.65
LDB18YLL049W HSL1P34244 1518 aa10.99□□□□□ -0.65
LDB18YLL049W MTC1P47018 478 aaKnown RBP10.98□□□□□ -0.65
LDB18YLL049W SPT6P23615 1451 aaKnown RBP10.95□□□□□ -0.66
LDB18YLL049W ECM5Q03214 1411 aa10.91□□□□□ -0.66
LDB18YLL049W THO2P53552 1597 aaKnown RBP10.77□□□□□ -0.68
LDB18YLL049W BUD4P47136 1447 aa10.75□□□□□ -0.69
LDB18YLL049W HIR3P47171 1648 aa10.71□□□□□ -0.69
LDB18YLL049W MDS3P53094 1487 aa10.7□□□□□ -0.7
LDB18YLL049W REV3P14284 1504 aa10.63□□□□□ -0.71
LDB18YLL049W PEP1P32319 1579 aa10.59□□□□□ -0.71
LDB18YLL049W FAP1P53971 965 aa10.54□□□□□ -0.72
LDB18YLL049W BPT1P14772 1559 aa10.45□□□□□ -0.74
LDB18YLL049W XRN1P22147 1528 aaKnown RBP10.43□□□□□ -0.74
LDB18YLL049W ATG2P53855 1592 aa10.43□□□□□ -0.74
LDB18YLL049W DRS1P32892 752 aaKnown RBP10.36□□□□□ -0.75
LDB18YLL049W MIF2P35201 549 aa10.29□□□□□ -0.76
LDB18YLL049W YCF1P39109 1515 aaKnown RBP10.27□□□□□ -0.77
LDB18YLL049W SSK2P53599 1579 aa10.2□□□□□ -0.78
LDB18YLL049W SKI3P17883 1432 aaKnown RBP10.12□□□□□ -0.79
LDB18YLL049W TAF2P23255 1407 aa10.1□□□□□ -0.79
LDB18YLL049W SIN3P22579 1536 aa10.09□□□□□ -0.79
LDB18YLL049W MYO2P19524 1574 aaKnown RBP10.04□□□□□ -0.8
LDB18YLL049W MET5P47169 1442 aa10.02□□□□□ -0.81
LDB18YLL049W BNI1P41832 1953 aa10.01□□□□□ -0.81
LDB18YLL049W UFD4P33202 1483 aa10.01□□□□□ -0.81
LDB18YLL049W DNF1P32660 1571 aa9.97□□□□□ -0.81
LDB18YLL049W ESP1Q03018 1630 aa9.97□□□□□ -0.81
LDB18YLL049W CDC25P04821 1589 aa9.97□□□□□ -0.81
LDB18YLL049W LTE1P07866 1435 aa9.96□□□□□ -0.82
LDB18YLL049W PRY3P47033 881 aa9.93□□□□□ -0.82
LDB18YLL049W YFR006WP43590 535 aa9.92□□□□□ -0.82
LDB18YLL049W ESC1Q03661 1658 aaKnown RBP9.92□□□□□ -0.82
LDB18YLL049W CHD1P32657 1468 aa9.91□□□□□ -0.82
LDB18YLL049W RPA190P10964 1664 aaKnown RBP9.91□□□□□ -0.82
LDB18YLL049W SSN2P38931 1420 aa9.9□□□□□ -0.83
LDB18YLL049W SCC2Q04002 1493 aa9.89□□□□□ -0.83
LDB18YLL049W TY1B-BRQ12193 1756 aa9.87□□□□□ -0.83
LDB18YLL049W TY1B-GR3Q12316 1755 aa9.87□□□□□ -0.83
LDB18YLL049W TY1B-ORQ92393 1755 aa9.87□□□□□ -0.83
LDB18YLL049W RKR1Q04781 1562 aa9.86□□□□□ -0.83
LDB18YLL049W TY2B-LR1P0C2J3 1770 aa9.85□□□□□ -0.83
LDB18YLL049W TY2B-FP0CX63 1770 aa9.85□□□□□ -0.83
LDB18YLL049W TY2B-GR2P0CX64 1770 aa9.85□□□□□ -0.83
LDB18YLL049W TY2B-CP25384 1770 aa9.85□□□□□ -0.83
LDB18YLL049W TY2B-DR2Q03494 1770 aa9.85□□□□□ -0.83
LDB18YLL049W TY1B-DR1Q03855 1755 aa9.85□□□□□ -0.83
LDB18YLL049W TY2B-DR3Q07791 1770 aaKnown RBP9.85□□□□□ -0.83
LDB18YLL049W TY2B-OR1Q12113 1770 aa9.85□□□□□ -0.83
LDB18YLL049W TY2B-DR1Q12472 1770 aa9.85□□□□□ -0.83
LDB18YLL049W TY2B-OR2Q12501 1770 aa9.85□□□□□ -0.83
LDB18YLL049W YPK9Q12697 1472 aa9.85□□□□□ -0.83
LDB18YLL049W ITT1Q04638 464 aa9.84□□□□□ -0.83
LDB18YLL049W RPO31P04051 1460 aa9.84□□□□□ -0.83
LDB18YLL049W ABP1P15891 592 aaKnown RBP9.8□□□□□ -0.84
LDB18YLL049W PAN1P32521 1480 aa9.79□□□□□ -0.84
LDB18YLL049W GEA2P39993 1459 aaKnown RBP9.79□□□□□ -0.84
LDB18YLL049W IRC20Q06554 1556 aa9.72□□□□□ -0.85
LDB18YLL049W TY1B-HO13535 1793 aa9.72□□□□□ -0.85
LDB18YLL049W TY1B-DR5P0C2I2 1755 aa9.72□□□□□ -0.85
LDB18YLL049W TY1B-DR6P0C2I3 1755 aa9.72□□□□□ -0.85
LDB18YLL049W TY1B-LR2P0C2I5 1755 aa9.72□□□□□ -0.85
LDB18YLL049W TY1B-LR3P0C2I6 1755 aaKnown RBP9.72□□□□□ -0.85
LDB18YLL049W TY1B-PR1P0C2I9 1755 aaKnown RBP9.72□□□□□ -0.85
LDB18YLL049W TY1B-PR2P0C2J0 1756 aa9.72□□□□□ -0.85
LDB18YLL049W TY1B-PR3P0C2J1 1755 aaKnown RBP9.72□□□□□ -0.85
LDB18YLL049W TY1B-JR1P47098 1755 aa9.72□□□□□ -0.85
LDB18YLL049W TY1B-ML2Q03434 1755 aaKnown RBP9.72□□□□□ -0.85
LDB18YLL049W TY1B-ER1Q03612 1755 aa9.72□□□□□ -0.85
LDB18YLL049W TY1B-ML1Q04711 1755 aaKnown RBP9.72□□□□□ -0.85
LDB18YLL049W TY1B-GR2Q12269 1755 aa9.72□□□□□ -0.85
LDB18YLL049W TY1B-OLQ12273 1755 aa9.72□□□□□ -0.85
LDB18YLL049W TY1B-PLQ12414 1755 aaKnown RBP9.72□□□□□ -0.85
LDB18YLL049W MMS1Q06211 1407 aa9.72□□□□□ -0.85
LDB18YLL049W TY2B-BQ12491 1770 aa9.7□□□□□ -0.86
LDB18YLL049W RQC2Q12532 1038 aaKnown RBP9.68□□□□□ -0.86
LDB18YLL049W YRF1-1P0CX20 1796 aa9.67□□□□□ -0.86
LDB18YLL049W YRF1-5P0CX21 1796 aa9.67□□□□□ -0.86
LDB18YLL049W YRF1-8P0CX22 1796 aa9.67□□□□□ -0.86
LDB18YLL049W TY1B-DR3Q99231 1755 aa9.65□□□□□ -0.87
LDB18YLL049W TOP2P06786 1428 aaKnown RBP9.6□□□□□ -0.87
LDB18YLL049W MMS22Q06164 1454 aa9.59□□□□□ -0.87
LDB18YLL049W AAD16Q02895 342 aa9.59□□□□□ -0.87
LDB18YLL049W PRI1P10363 409 aa9.58□□□□□ -0.88
LDB18YLL049W DRS2P39524 1355 aa9.58□□□□□ -0.88
LDB18YLL049W TRM732Q03496 1420 aa9.56□□□□□ -0.88
LDB18YLL049W DNF2Q12675 1612 aa9.55□□□□□ -0.88
LDB18YLL049W VPS15P22219 1454 aa9.53□□□□□ -0.88
LDB18YLL049W NUP159P40477 1460 aa9.53□□□□□ -0.88
LDB18YLL049W TY1B-JR2P47100 1755 aaKnown RBP9.5□□□□□ -0.89
LDB18YLL049W TY1B-ER2Q03619 1755 aa9.5□□□□□ -0.89
Retrieved 100 of 5,963 RNA–protein pairs in 20.4 ms