RNA–Protein interactions for RNA: YKR053C

YSR3, Transcript of Dihydrosphingosine 1-phosphate phosphatase, yeastyeast

Gene YSR3, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YSR3YKR053C MON2P48563 1636 aaPredicted RBP20.28■□□□□ 0.84
YSR3YKR053C INO80P53115 1489 aa20.27■□□□□ 0.84
YSR3YKR053C TCB3Q03640 1545 aaKnown RBP19.64■□□□□ 0.73
YSR3YKR053C SGS1P35187 1447 aa19.59■□□□□ 0.73
YSR3YKR053C SWR1Q05471 1514 aa19.48■□□□□ 0.71
YSR3YKR053C TY1B-DR4Q07793 1604 aa19.41■□□□□ 0.7
YSR3YKR053C DNA2P38859 1522 aa19.31■□□□□ 0.68
YSR3YKR053C KOG1P38873 1557 aa19.09■□□□□ 0.65
YSR3YKR053C HSL1P34244 1518 aa18.89■□□□□ 0.61
YSR3YKR053C SPT6P23615 1451 aaKnown RBP18.87■□□□□ 0.61
YSR3YKR053C SPA2P23201 1466 aaKnown RBP18.71■□□□□ 0.59
YSR3YKR053C HIR3P47171 1648 aa18.48■□□□□ 0.55
YSR3YKR053C RSE1Q04693 1361 aaKnown RBP18.41■□□□□ 0.54
YSR3YKR053C ECM5Q03214 1411 aa18.32■□□□□ 0.52
YSR3YKR053C BUD4P47136 1447 aa18.25■□□□□ 0.51
YSR3YKR053C SSN2P38931 1420 aa18.22■□□□□ 0.51
YSR3YKR053C THO2P53552 1597 aaKnown RBP18.21■□□□□ 0.51
YSR3YKR053C XRN1P22147 1528 aaKnown RBP18.21■□□□□ 0.51
YSR3YKR053C MDS3P53094 1487 aa18.01■□□□□ 0.47
YSR3YKR053C REV3P14284 1504 aa17.89■□□□□ 0.45
YSR3YKR053C PEP1P32319 1579 aa17.85■□□□□ 0.45
YSR3YKR053C ATG2P53855 1592 aa17.77■□□□□ 0.44
YSR3YKR053C SIN3P22579 1536 aa17.72■□□□□ 0.43
YSR3YKR053C TAF2P23255 1407 aa17.65■□□□□ 0.42
YSR3YKR053C DRS1P32892 752 aaKnown RBP17.63■□□□□ 0.41
YSR3YKR053C MTC1P47018 478 aaKnown RBP17.6■□□□□ 0.41
YSR3YKR053C SKI3P17883 1432 aaKnown RBP17.59■□□□□ 0.41
YSR3YKR053C SSK2P53599 1579 aa17.54■□□□□ 0.4
YSR3YKR053C BPT1P14772 1559 aa17.46■□□□□ 0.39
YSR3YKR053C ESP1Q03018 1630 aa17.36■□□□□ 0.37
YSR3YKR053C YPK9Q12697 1472 aa17.3■□□□□ 0.36
YSR3YKR053C UFD4P33202 1483 aa17.25■□□□□ 0.35
YSR3YKR053C MYO2P19524 1574 aaKnown RBP17.23■□□□□ 0.35
YSR3YKR053C SCC2Q04002 1493 aa17.22■□□□□ 0.35
YSR3YKR053C YCF1P39109 1515 aaKnown RBP17.21■□□□□ 0.34
YSR3YKR053C RPO31P04051 1460 aa17.15■□□□□ 0.34
YSR3YKR053C CHD1P32657 1468 aa16.96■□□□□ 0.31
YSR3YKR053C TOP2P06786 1428 aaKnown RBP16.92■□□□□ 0.3
YSR3YKR053C CDC25P04821 1589 aa16.89■□□□□ 0.29
YSR3YKR053C POL1P13382 1468 aa16.86■□□□□ 0.29
YSR3YKR053C RQC2Q12532 1038 aaKnown RBP16.8■□□□□ 0.28
YSR3YKR053C PAN1P32521 1480 aa16.8■□□□□ 0.28
YSR3YKR053C DNF1P32660 1571 aa16.77■□□□□ 0.28
YSR3YKR053C RKR1Q04781 1562 aa16.77■□□□□ 0.28
YSR3YKR053C TY2B-LR1P0C2J3 1770 aa16.77■□□□□ 0.28
YSR3YKR053C TY2B-FP0CX63 1770 aa16.77■□□□□ 0.28
YSR3YKR053C TY2B-GR2P0CX64 1770 aa16.77■□□□□ 0.28
YSR3YKR053C TY2B-CP25384 1770 aa16.77■□□□□ 0.28
YSR3YKR053C TY2B-DR2Q03494 1770 aa16.77■□□□□ 0.28
YSR3YKR053C TY1B-DR1Q03855 1755 aa16.77■□□□□ 0.28
YSR3YKR053C TY2B-DR3Q07791 1770 aaKnown RBP16.77■□□□□ 0.28
YSR3YKR053C TY2B-OR1Q12113 1770 aa16.77■□□□□ 0.28
YSR3YKR053C TY2B-DR1Q12472 1770 aa16.77■□□□□ 0.28
YSR3YKR053C TY2B-OR2Q12501 1770 aa16.77■□□□□ 0.28
YSR3YKR053C MET5P47169 1442 aa16.76■□□□□ 0.27
YSR3YKR053C SMC4Q12267 1418 aa16.7■□□□□ 0.26
YSR3YKR053C MMS22Q06164 1454 aa16.7■□□□□ 0.26
YSR3YKR053C YOR1P53049 1477 aa16.69■□□□□ 0.26
YSR3YKR053C STU1P38198 1513 aa16.69■□□□□ 0.26
YSR3YKR053C TY1B-BRQ12193 1756 aa16.66■□□□□ 0.26
YSR3YKR053C TY1B-GR3Q12316 1755 aa16.66■□□□□ 0.26
YSR3YKR053C TY1B-ORQ92393 1755 aa16.66■□□□□ 0.26
YSR3YKR053C ESC1Q03661 1658 aaKnown RBP16.61■□□□□ 0.25
YSR3YKR053C TY2B-BQ12491 1770 aa16.58■□□□□ 0.24
YSR3YKR053C SPP41P38904 1435 aa16.57■□□□□ 0.24
YSR3YKR053C TRM732Q03496 1420 aa16.57■□□□□ 0.24
YSR3YKR053C TY1B-DR3Q99231 1755 aa16.56■□□□□ 0.24
YSR3YKR053C TY1B-HO13535 1793 aa16.54■□□□□ 0.24
YSR3YKR053C TY1B-DR5P0C2I2 1755 aa16.54■□□□□ 0.24
YSR3YKR053C TY1B-DR6P0C2I3 1755 aa16.54■□□□□ 0.24
YSR3YKR053C TY1B-LR2P0C2I5 1755 aa16.54■□□□□ 0.24
YSR3YKR053C TY1B-LR3P0C2I6 1755 aaKnown RBP16.54■□□□□ 0.24
YSR3YKR053C TY1B-PR1P0C2I9 1755 aaKnown RBP16.54■□□□□ 0.24
YSR3YKR053C TY1B-PR2P0C2J0 1756 aa16.54■□□□□ 0.24
YSR3YKR053C TY1B-PR3P0C2J1 1755 aaKnown RBP16.54■□□□□ 0.24
YSR3YKR053C TY1B-JR1P47098 1755 aa16.54■□□□□ 0.24
YSR3YKR053C TY1B-ML2Q03434 1755 aaKnown RBP16.54■□□□□ 0.24
YSR3YKR053C TY1B-ER1Q03612 1755 aa16.54■□□□□ 0.24
YSR3YKR053C TY1B-ML1Q04711 1755 aaKnown RBP16.54■□□□□ 0.24
YSR3YKR053C TY1B-GR2Q12269 1755 aa16.54■□□□□ 0.24
YSR3YKR053C TY1B-OLQ12273 1755 aa16.54■□□□□ 0.24
YSR3YKR053C TY1B-PLQ12414 1755 aaKnown RBP16.54■□□□□ 0.24
YSR3YKR053C LTE1P07866 1435 aa16.53■□□□□ 0.24
YSR3YKR053C RPA190P10964 1664 aaKnown RBP16.53■□□□□ 0.24
YSR3YKR053C TSC11P40061 1430 aa16.46■□□□□ 0.23
YSR3YKR053C YTA7P40340 1379 aa16.43■□□□□ 0.22
YSR3YKR053C VTH1P40438 1549 aa16.39■□□□□ 0.21
YSR3YKR053C VTH2P40890 1549 aa16.39■□□□□ 0.21
YSR3YKR053C MYO4P32492 1471 aa16.38■□□□□ 0.21
YSR3YKR053C NUP159P40477 1460 aa16.38■□□□□ 0.21
YSR3YKR053C GEA2P39993 1459 aaKnown RBP16.34■□□□□ 0.21
YSR3YKR053C VPS15P22219 1454 aa16.26■□□□□ 0.19
YSR3YKR053C NTE1Q04958 1679 aa16.23■□□□□ 0.19
YSR3YKR053C TY1B-JR2P47100 1755 aaKnown RBP16.22■□□□□ 0.19
YSR3YKR053C TY1B-ER2Q03619 1755 aa16.22■□□□□ 0.19
YSR3YKR053C TY1B-MR1Q04214 1755 aa16.22■□□□□ 0.19
YSR3YKR053C TY1B-MR2Q04670 1755 aaKnown RBP16.22■□□□□ 0.19
YSR3YKR053C TY1B-LR1Q12088 1755 aaKnown RBP16.22■□□□□ 0.19
YSR3YKR053C TY1B-NL1Q12112 1755 aa16.22■□□□□ 0.19
YSR3YKR053C TY1B-GR1Q12141 1755 aa16.22■□□□□ 0.19
Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms