RNA–Protein interactions for RNA: YKR043C

SHB17, Transcript of Sedoheptulose bisphosphatase involved in riboneogenesis, yeastyeast

Gene SHB17, Length 816 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHB17YKR043C MON2P48563 1636 aaPredicted RBP20.26■□□□□ 0.83
SHB17YKR043C INO80P53115 1489 aa20.16■□□□□ 0.82
SHB17YKR043C SGS1P35187 1447 aa19.68■□□□□ 0.74
SHB17YKR043C TCB3Q03640 1545 aaKnown RBP19.66■□□□□ 0.74
SHB17YKR043C TY1B-DR4Q07793 1604 aa19.54■□□□□ 0.72
SHB17YKR043C SWR1Q05471 1514 aa19.49■□□□□ 0.71
SHB17YKR043C DNA2P38859 1522 aa19.25■□□□□ 0.67
SHB17YKR043C KOG1P38873 1557 aa19.06■□□□□ 0.64
SHB17YKR043C HSL1P34244 1518 aa18.99■□□□□ 0.63
SHB17YKR043C SPT6P23615 1451 aaKnown RBP18.94■□□□□ 0.62
SHB17YKR043C SPA2P23201 1466 aaKnown RBP18.75■□□□□ 0.59
SHB17YKR043C HIR3P47171 1648 aa18.59■□□□□ 0.57
SHB17YKR043C SSN2P38931 1420 aa18.38■□□□□ 0.53
SHB17YKR043C XRN1P22147 1528 aaKnown RBP18.3■□□□□ 0.52
SHB17YKR043C ECM5Q03214 1411 aa18.28■□□□□ 0.52
SHB17YKR043C THO2P53552 1597 aaKnown RBP18.27■□□□□ 0.52
SHB17YKR043C BUD4P47136 1447 aa18.24■□□□□ 0.51
SHB17YKR043C RSE1Q04693 1361 aaKnown RBP18.21■□□□□ 0.51
SHB17YKR043C MDS3P53094 1487 aa18.03■□□□□ 0.48
SHB17YKR043C REV3P14284 1504 aa18.03■□□□□ 0.48
SHB17YKR043C PEP1P32319 1579 aa17.91■□□□□ 0.46
SHB17YKR043C ATG2P53855 1592 aa17.91■□□□□ 0.46
SHB17YKR043C SIN3P22579 1536 aa17.86■□□□□ 0.45
SHB17YKR043C TAF2P23255 1407 aa17.75■□□□□ 0.43
SHB17YKR043C SSK2P53599 1579 aa17.71■□□□□ 0.43
SHB17YKR043C DRS1P32892 752 aaKnown RBP17.71■□□□□ 0.43
SHB17YKR043C SKI3P17883 1432 aaKnown RBP17.63■□□□□ 0.41
SHB17YKR043C ESP1Q03018 1630 aa17.59■□□□□ 0.41
SHB17YKR043C BPT1P14772 1559 aa17.49■□□□□ 0.39
SHB17YKR043C MTC1P47018 478 aaKnown RBP17.48■□□□□ 0.39
SHB17YKR043C MYO2P19524 1574 aaKnown RBP17.4■□□□□ 0.38
SHB17YKR043C YPK9Q12697 1472 aa17.37■□□□□ 0.37
SHB17YKR043C SCC2Q04002 1493 aa17.31■□□□□ 0.36
SHB17YKR043C UFD4P33202 1483 aa17.3■□□□□ 0.36
SHB17YKR043C YCF1P39109 1515 aaKnown RBP17.23■□□□□ 0.35
SHB17YKR043C RPO31P04051 1460 aa17.21■□□□□ 0.35
SHB17YKR043C TY2B-LR1P0C2J3 1770 aa17.05■□□□□ 0.32
SHB17YKR043C TY2B-FP0CX63 1770 aa17.05■□□□□ 0.32
SHB17YKR043C TY2B-GR2P0CX64 1770 aa17.05■□□□□ 0.32
SHB17YKR043C TY2B-CP25384 1770 aa17.05■□□□□ 0.32
SHB17YKR043C TY2B-DR2Q03494 1770 aa17.05■□□□□ 0.32
SHB17YKR043C TY1B-DR1Q03855 1755 aa17.05■□□□□ 0.32
SHB17YKR043C TY2B-DR3Q07791 1770 aaKnown RBP17.05■□□□□ 0.32
SHB17YKR043C TY2B-OR1Q12113 1770 aa17.05■□□□□ 0.32
SHB17YKR043C TY2B-DR1Q12472 1770 aa17.05■□□□□ 0.32
SHB17YKR043C TY2B-OR2Q12501 1770 aa17.05■□□□□ 0.32
SHB17YKR043C CDC25P04821 1589 aa16.98■□□□□ 0.31
SHB17YKR043C POL1P13382 1468 aa16.97■□□□□ 0.31
SHB17YKR043C TOP2P06786 1428 aaKnown RBP16.96■□□□□ 0.31
SHB17YKR043C CHD1P32657 1468 aa16.96■□□□□ 0.31
SHB17YKR043C RKR1Q04781 1562 aa16.95■□□□□ 0.3
SHB17YKR043C TY1B-BRQ12193 1756 aa16.91■□□□□ 0.3
SHB17YKR043C TY1B-GR3Q12316 1755 aa16.91■□□□□ 0.3
SHB17YKR043C TY1B-ORQ92393 1755 aa16.91■□□□□ 0.3
SHB17YKR043C TY2B-BQ12491 1770 aa16.85■□□□□ 0.29
SHB17YKR043C TY1B-DR3Q99231 1755 aa16.85■□□□□ 0.29
SHB17YKR043C STU1P38198 1513 aa16.84■□□□□ 0.29
SHB17YKR043C DNF1P32660 1571 aa16.83■□□□□ 0.28
SHB17YKR043C ESC1Q03661 1658 aaKnown RBP16.82■□□□□ 0.28
SHB17YKR043C PAN1P32521 1480 aa16.82■□□□□ 0.28
SHB17YKR043C RQC2Q12532 1038 aaKnown RBP16.81■□□□□ 0.28
SHB17YKR043C YOR1P53049 1477 aa16.8■□□□□ 0.28
SHB17YKR043C TY1B-HO13535 1793 aa16.79■□□□□ 0.28
SHB17YKR043C TY1B-DR5P0C2I2 1755 aa16.79■□□□□ 0.28
SHB17YKR043C TY1B-DR6P0C2I3 1755 aa16.79■□□□□ 0.28
SHB17YKR043C TY1B-LR2P0C2I5 1755 aa16.79■□□□□ 0.28
SHB17YKR043C TY1B-LR3P0C2I6 1755 aaKnown RBP16.79■□□□□ 0.28
SHB17YKR043C TY1B-PR1P0C2I9 1755 aaKnown RBP16.79■□□□□ 0.28
SHB17YKR043C TY1B-PR2P0C2J0 1756 aa16.79■□□□□ 0.28
SHB17YKR043C TY1B-PR3P0C2J1 1755 aaKnown RBP16.79■□□□□ 0.28
SHB17YKR043C TY1B-JR1P47098 1755 aa16.79■□□□□ 0.28
SHB17YKR043C TY1B-ML2Q03434 1755 aaKnown RBP16.79■□□□□ 0.28
SHB17YKR043C TY1B-ER1Q03612 1755 aa16.79■□□□□ 0.28
SHB17YKR043C TY1B-ML1Q04711 1755 aaKnown RBP16.79■□□□□ 0.28
SHB17YKR043C TY1B-GR2Q12269 1755 aa16.79■□□□□ 0.28
SHB17YKR043C TY1B-OLQ12273 1755 aa16.79■□□□□ 0.28
SHB17YKR043C TY1B-PLQ12414 1755 aaKnown RBP16.79■□□□□ 0.28
SHB17YKR043C SMC4Q12267 1418 aa16.77■□□□□ 0.27
SHB17YKR043C MMS22Q06164 1454 aa16.74■□□□□ 0.27
SHB17YKR043C RPA190P10964 1664 aaKnown RBP16.69■□□□□ 0.26
SHB17YKR043C MET5P47169 1442 aa16.67■□□□□ 0.26
SHB17YKR043C SPP41P38904 1435 aa16.62■□□□□ 0.25
SHB17YKR043C TRM732Q03496 1420 aa16.57■□□□□ 0.24
SHB17YKR043C YTA7P40340 1379 aa16.51■□□□□ 0.23
SHB17YKR043C TSC11P40061 1430 aa16.49■□□□□ 0.23
SHB17YKR043C VTH1P40438 1549 aa16.49■□□□□ 0.23
SHB17YKR043C VTH2P40890 1549 aa16.49■□□□□ 0.23
SHB17YKR043C MYO4P32492 1471 aa16.48■□□□□ 0.23
SHB17YKR043C TY1B-JR2P47100 1755 aaKnown RBP16.47■□□□□ 0.23
SHB17YKR043C TY1B-ER2Q03619 1755 aa16.47■□□□□ 0.23
SHB17YKR043C TY1B-MR1Q04214 1755 aa16.47■□□□□ 0.23
SHB17YKR043C TY1B-MR2Q04670 1755 aaKnown RBP16.47■□□□□ 0.23
SHB17YKR043C TY1B-LR1Q12088 1755 aaKnown RBP16.47■□□□□ 0.23
SHB17YKR043C TY1B-NL1Q12112 1755 aa16.47■□□□□ 0.23
SHB17YKR043C TY1B-GR1Q12141 1755 aa16.47■□□□□ 0.23
SHB17YKR043C TY1B-BLQ12490 1755 aa16.47■□□□□ 0.23
SHB17YKR043C NTE1Q04958 1679 aa16.43■□□□□ 0.22
SHB17YKR043C LTE1P07866 1435 aa16.42■□□□□ 0.22
SHB17YKR043C NUP159P40477 1460 aa16.41■□□□□ 0.22
SHB17YKR043C YRF1-1P0CX20 1796 aa16.35■□□□□ 0.21
Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms