RNA–Protein interactions for RNA: YKR040C

YKR040C, Transcript of Dubious open reading frame, yeastyeast

Gene YKR040C, Length 504 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YKR040CYKR040C INO80P53115 1489 aa22.94■■□□□ 1.26
YKR040CYKR040C MON2P48563 1636 aaPredicted RBP22.9■■□□□ 1.26
YKR040CYKR040C SGS1P35187 1447 aa22.29■■□□□ 1.16
YKR040CYKR040C TCB3Q03640 1545 aaKnown RBP22.21■■□□□ 1.15
YKR040CYKR040C TY1B-DR4Q07793 1604 aa22.03■■□□□ 1.12
YKR040CYKR040C SWR1Q05471 1514 aa22.03■■□□□ 1.12
YKR040CYKR040C DNA2P38859 1522 aa21.85■■□□□ 1.09
YKR040CYKR040C KOG1P38873 1557 aa21.59■■□□□ 1.05
YKR040CYKR040C HSL1P34244 1518 aa21.39■■□□□ 1.01
YKR040CYKR040C SPT6P23615 1451 aaKnown RBP21.39■■□□□ 1.01
YKR040CYKR040C SPA2P23201 1466 aaKnown RBP21.24■□□□□ 0.99
YKR040CYKR040C HIR3P47171 1648 aa20.97■□□□□ 0.95
YKR040CYKR040C RSE1Q04693 1361 aaKnown RBP20.82■□□□□ 0.92
YKR040CYKR040C ECM5Q03214 1411 aa20.77■□□□□ 0.91
YKR040CYKR040C SSN2P38931 1420 aa20.73■□□□□ 0.91
YKR040CYKR040C XRN1P22147 1528 aaKnown RBP20.69■□□□□ 0.9
YKR040CYKR040C BUD4P47136 1447 aa20.63■□□□□ 0.89
YKR040CYKR040C THO2P53552 1597 aaKnown RBP20.62■□□□□ 0.89
YKR040CYKR040C MDS3P53094 1487 aa20.35■□□□□ 0.85
YKR040CYKR040C REV3P14284 1504 aa20.31■□□□□ 0.84
YKR040CYKR040C PEP1P32319 1579 aa20.21■□□□□ 0.83
YKR040CYKR040C ATG2P53855 1592 aa20.17■□□□□ 0.82
YKR040CYKR040C DRS1P32892 752 aaKnown RBP20.16■□□□□ 0.82
YKR040CYKR040C TAF2P23255 1407 aa20.14■□□□□ 0.81
YKR040CYKR040C MTC1P47018 478 aaKnown RBP20.08■□□□□ 0.81
YKR040CYKR040C SIN3P22579 1536 aa20.07■□□□□ 0.8
YKR040CYKR040C SKI3P17883 1432 aaKnown RBP20.02■□□□□ 0.79
YKR040CYKR040C SSK2P53599 1579 aa19.92■□□□□ 0.78
YKR040CYKR040C ESP1Q03018 1630 aa19.84■□□□□ 0.77
YKR040CYKR040C BPT1P14772 1559 aa19.82■□□□□ 0.76
YKR040CYKR040C MYO2P19524 1574 aaKnown RBP19.61■□□□□ 0.73
YKR040CYKR040C UFD4P33202 1483 aa19.59■□□□□ 0.73
YKR040CYKR040C YPK9Q12697 1472 aa19.59■□□□□ 0.73
YKR040CYKR040C SCC2Q04002 1493 aa19.52■□□□□ 0.72
YKR040CYKR040C YCF1P39109 1515 aaKnown RBP19.47■□□□□ 0.71
YKR040CYKR040C RPO31P04051 1460 aa19.42■□□□□ 0.7
YKR040CYKR040C RQC2Q12532 1038 aaKnown RBP19.23■□□□□ 0.67
YKR040CYKR040C TY2B-LR1P0C2J3 1770 aa19.23■□□□□ 0.67
YKR040CYKR040C TY2B-FP0CX63 1770 aa19.23■□□□□ 0.67
YKR040CYKR040C TY2B-GR2P0CX64 1770 aa19.23■□□□□ 0.67
YKR040CYKR040C TY2B-CP25384 1770 aa19.23■□□□□ 0.67
YKR040CYKR040C TY2B-DR2Q03494 1770 aa19.23■□□□□ 0.67
YKR040CYKR040C TY1B-DR1Q03855 1755 aa19.23■□□□□ 0.67
YKR040CYKR040C TY2B-DR3Q07791 1770 aaKnown RBP19.23■□□□□ 0.67
YKR040CYKR040C TY2B-OR1Q12113 1770 aa19.23■□□□□ 0.67
YKR040CYKR040C TY2B-DR1Q12472 1770 aa19.23■□□□□ 0.67
YKR040CYKR040C TY2B-OR2Q12501 1770 aa19.23■□□□□ 0.67
YKR040CYKR040C CHD1P32657 1468 aa19.19■□□□□ 0.66
YKR040CYKR040C TOP2P06786 1428 aaKnown RBP19.18■□□□□ 0.66
YKR040CYKR040C CDC25P04821 1589 aa19.17■□□□□ 0.66
YKR040CYKR040C POL1P13382 1468 aa19.13■□□□□ 0.65
YKR040CYKR040C RKR1Q04781 1562 aa19.12■□□□□ 0.65
YKR040CYKR040C TY1B-BRQ12193 1756 aa19.09■□□□□ 0.65
YKR040CYKR040C TY1B-GR3Q12316 1755 aa19.09■□□□□ 0.65
YKR040CYKR040C TY1B-ORQ92393 1755 aa19.09■□□□□ 0.65
YKR040CYKR040C PAN1P32521 1480 aa19.04■□□□□ 0.64
YKR040CYKR040C ESC1Q03661 1658 aaKnown RBP19.01■□□□□ 0.63
YKR040CYKR040C STU1P38198 1513 aa19.01■□□□□ 0.63
YKR040CYKR040C DNF1P32660 1571 aa19.01■□□□□ 0.63
YKR040CYKR040C TY2B-BQ12491 1770 aa19.01■□□□□ 0.63
YKR040CYKR040C TY1B-DR3Q99231 1755 aa19■□□□□ 0.63
YKR040CYKR040C TY1B-HO13535 1793 aa18.95■□□□□ 0.62
YKR040CYKR040C TY1B-DR5P0C2I2 1755 aa18.95■□□□□ 0.62
YKR040CYKR040C TY1B-DR6P0C2I3 1755 aa18.95■□□□□ 0.62
YKR040CYKR040C TY1B-LR2P0C2I5 1755 aa18.95■□□□□ 0.62
YKR040CYKR040C TY1B-LR3P0C2I6 1755 aaKnown RBP18.95■□□□□ 0.62
YKR040CYKR040C TY1B-PR1P0C2I9 1755 aaKnown RBP18.95■□□□□ 0.62
YKR040CYKR040C TY1B-PR2P0C2J0 1756 aa18.95■□□□□ 0.62
YKR040CYKR040C TY1B-PR3P0C2J1 1755 aaKnown RBP18.95■□□□□ 0.62
YKR040CYKR040C TY1B-JR1P47098 1755 aa18.95■□□□□ 0.62
YKR040CYKR040C TY1B-ML2Q03434 1755 aaKnown RBP18.95■□□□□ 0.62
YKR040CYKR040C TY1B-ER1Q03612 1755 aa18.95■□□□□ 0.62
YKR040CYKR040C TY1B-ML1Q04711 1755 aaKnown RBP18.95■□□□□ 0.62
YKR040CYKR040C TY1B-GR2Q12269 1755 aa18.95■□□□□ 0.62
YKR040CYKR040C TY1B-OLQ12273 1755 aa18.95■□□□□ 0.62
YKR040CYKR040C TY1B-PLQ12414 1755 aaKnown RBP18.95■□□□□ 0.62
YKR040CYKR040C YOR1P53049 1477 aa18.95■□□□□ 0.62
YKR040CYKR040C MMS22Q06164 1454 aa18.95■□□□□ 0.62
YKR040CYKR040C SMC4Q12267 1418 aa18.93■□□□□ 0.62
YKR040CYKR040C MET5P47169 1442 aa18.91■□□□□ 0.62
YKR040CYKR040C RPA190P10964 1664 aaKnown RBP18.85■□□□□ 0.61
YKR040CYKR040C TRM732Q03496 1420 aa18.79■□□□□ 0.6
YKR040CYKR040C SPP41P38904 1435 aa18.78■□□□□ 0.6
YKR040CYKR040C YTA7P40340 1379 aa18.69■□□□□ 0.58
YKR040CYKR040C TSC11P40061 1430 aa18.65■□□□□ 0.58
YKR040CYKR040C LTE1P07866 1435 aa18.63■□□□□ 0.57
YKR040CYKR040C TY1B-JR2P47100 1755 aaKnown RBP18.6■□□□□ 0.57
YKR040CYKR040C TY1B-ER2Q03619 1755 aa18.6■□□□□ 0.57
YKR040CYKR040C TY1B-MR1Q04214 1755 aa18.6■□□□□ 0.57
YKR040CYKR040C TY1B-MR2Q04670 1755 aaKnown RBP18.6■□□□□ 0.57
YKR040CYKR040C TY1B-LR1Q12088 1755 aaKnown RBP18.6■□□□□ 0.57
YKR040CYKR040C TY1B-NL1Q12112 1755 aa18.6■□□□□ 0.57
YKR040CYKR040C TY1B-GR1Q12141 1755 aa18.6■□□□□ 0.57
YKR040CYKR040C TY1B-BLQ12490 1755 aa18.6■□□□□ 0.57
YKR040CYKR040C VTH1P40438 1549 aa18.59■□□□□ 0.57
YKR040CYKR040C VTH2P40890 1549 aa18.59■□□□□ 0.57
YKR040CYKR040C MYO4P32492 1471 aa18.57■□□□□ 0.56
YKR040CYKR040C NUP159P40477 1460 aa18.57■□□□□ 0.56
YKR040CYKR040C YRF1-1P0CX20 1796 aa18.48■□□□□ 0.55
YKR040CYKR040C YRF1-5P0CX21 1796 aa18.48■□□□□ 0.55
Retrieved 100 of 5,963 RNA–protein pairs in 27.1 ms