RNA–Protein interactions for RNA: YJR065C

ARP3, Transcript of Essential component of the Arp2/3 complex, yeastyeast

Gene ARP3, Length 1,350 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ARP3YJR065C MTC1P47018 478 aaKnown RBP12.88□□□□□ -0.35
ARP3YJR065C DRS1P32892 752 aaKnown RBP11.87□□□□□ -0.51
ARP3YJR065C FAP1P53971 965 aa11.83□□□□□ -0.52
ARP3YJR065C PRY3P47033 881 aa11.11□□□□□ -0.63
ARP3YJR065C PRI1P10363 409 aa10.96□□□□□ -0.65
ARP3YJR065C AAD16Q02895 342 aa10.92□□□□□ -0.66
ARP3YJR065C ISW2Q08773 1120 aa10.73□□□□□ -0.69
ARP3YJR065C RPG1P38249 964 aaKnown RBP10.63□□□□□ -0.71
ARP3YJR065C DIP2Q12220 943 aaPredicted RBP10.47□□□□□ -0.73
ARP3YJR065C YCK3P39962 524 aa10.44□□□□□ -0.74
ARP3YJR065C HAA1Q12753 694 aaKnown RBP10.39□□□□□ -0.75
ARP3YJR065C TSR3Q12094 313 aaKnown RBP10.36□□□□□ -0.75
ARP3YJR065C SGS1P35187 1447 aa10.21□□□□□ -0.77
ARP3YJR065C SPA2P23201 1466 aaKnown RBP10.2□□□□□ -0.78
ARP3YJR065C RSE1Q04693 1361 aaKnown RBP10.17□□□□□ -0.78
ARP3YJR065C AVT3P36062 692 aa10.03□□□□□ -0.8
ARP3YJR065C SSN2P38931 1420 aa10.02□□□□□ -0.81
ARP3YJR065C MRPL32P25348 183 aa9.97□□□□□ -0.81
ARP3YJR065C RPL17AP05740 184 aaKnown RBP9.87□□□□□ -0.83
ARP3YJR065C RPL17BP46990 184 aaKnown RBP9.87□□□□□ -0.83
ARP3YJR065C INO80P53115 1489 aa9.85□□□□□ -0.83
ARP3YJR065C REB1P21538 810 aa9.85□□□□□ -0.83
ARP3YJR065C BFR2Q06631 534 aaKnown RBP9.78□□□□□ -0.84
ARP3YJR065C SKI3P17883 1432 aaKnown RBP9.69□□□□□ -0.86
ARP3YJR065C YGL015CP33199 130 aa9.61□□□□□ -0.87
ARP3YJR065C TCB3Q03640 1545 aaKnown RBP9.5□□□□□ -0.89
ARP3YJR065C NOP2P40991 618 aaKnown RBP9.45□□□□□ -0.9
ARP3YJR065C CDC27P38042 758 aa9.41□□□□□ -0.9
ARP3YJR065C SPT21P35209 758 aa9.39□□□□□ -0.91
ARP3YJR065C YKR023WP36119 530 aaKnown RBP9.35□□□□□ -0.91
ARP3YJR065C MMS22Q06164 1454 aa9.31□□□□□ -0.92
ARP3YJR065C CHD1P32657 1468 aa9.3□□□□□ -0.92
ARP3YJR065C TY1B-DR4Q07793 1604 aa9.28□□□□□ -0.92
ARP3YJR065C HSL1P34244 1518 aa9.26□□□□□ -0.93
ARP3YJR065C SPT6P23615 1451 aaKnown RBP9.25□□□□□ -0.93
ARP3YJR065C NSR1P27476 414 aaKnown RBP RIP-Chip data9.24□□□□□ -0.93not detected
ARP3YJR065C XRN1P22147 1528 aaKnown RBP9.19□□□□□ -0.94
ARP3YJR065C HOP09932 586 aa9.17□□□□□ -0.94
ARP3YJR065C UBP10P53874 792 aaPredicted RBP9.16□□□□□ -0.94
ARP3YJR065C TFC8Q12308 588 aa9.15□□□□□ -0.94
ARP3YJR065C THO2P53552 1597 aaKnown RBP9.15□□□□□ -0.94
ARP3YJR065C HIR3P47171 1648 aa9.15□□□□□ -0.95
ARP3YJR065C DCD1P06773 312 aa9.14□□□□□ -0.95
ARP3YJR065C MAP2P38174 421 aaKnown RBP9.14□□□□□ -0.95
ARP3YJR065C REV3P14284 1504 aa9.1□□□□□ -0.95
ARP3YJR065C UFD4P33202 1483 aa9.1□□□□□ -0.95
ARP3YJR065C SAS10Q12136 610 aaPredicted RBP9.09□□□□□ -0.95
ARP3YJR065C TAF2P23255 1407 aa9.06□□□□□ -0.96
ARP3YJR065C RIM101P33400 625 aa9.04□□□□□ -0.96
ARP3YJR065C SIN3P22579 1536 aa9.04□□□□□ -0.96
ARP3YJR065C SSK2P53599 1579 aa9.03□□□□□ -0.96
ARP3YJR065C MYO2P19524 1574 aaKnown RBP9.02□□□□□ -0.97
ARP3YJR065C YTA7P40340 1379 aa9.01□□□□□ -0.97
ARP3YJR065C STU1P38198 1513 aa9□□□□□ -0.97
ARP3YJR065C IKI3Q06706 1349 aaKnown RBP8.99□□□□□ -0.97
ARP3YJR065C TRM732Q03496 1420 aa8.99□□□□□ -0.97
ARP3YJR065C ENP1P38333 483 aaKnown RBP8.99□□□□□ -0.97
ARP3YJR065C SPP41P38904 1435 aa8.99□□□□□ -0.97
ARP3YJR065C TFA1P36100 482 aa8.97□□□□□ -0.97
ARP3YJR065C POL5P39985 1022 aaKnown RBP8.94□□□□□ -0.98
ARP3YJR065C SCY1P53009 804 aa8.94□□□□□ -0.98
ARP3YJR065C RQC2Q12532 1038 aaKnown RBP8.94□□□□□ -0.98
ARP3YJR065C ESP1Q03018 1630 aa8.93□□□□□ -0.98
ARP3YJR065C POL1P13382 1468 aa8.93□□□□□ -0.98
ARP3YJR065C TAF7Q05021 590 aa8.88□□□□□ -0.99
ARP3YJR065C BPT1P14772 1559 aa8.87□□□□□ -0.99
ARP3YJR065C BUD31P25337 157 aaPredicted RBP8.86□□□□□ -0.99
ARP3YJR065C BCH2P36122 765 aa8.86□□□□□ -0.99
ARP3YJR065C MON2P48563 1636 aaPredicted RBP8.84□□□□□ -0.99
ARP3YJR065C SLX5P32828 619 aaKnown RBP8.84□□□□□ -0.99
ARP3YJR065C SCC2Q04002 1493 aa8.83□□□□□ -1
ARP3YJR065C SWR1Q05471 1514 aa8.83□□□□□ -1
ARP3YJR065C SEC3P33332 1336 aaKnown RBP8.82□□□□□ -1
ARP3YJR065C SMC4Q12267 1418 aa8.81□□□□□ -1
ARP3YJR065C TIF4632P39936 914 aaKnown RBP8.81□□□□□ -1
ARP3YJR065C MYO4P32492 1471 aa8.81□□□□□ -1
ARP3YJR065C SSM4P40318 1319 aa8.81□□□□□ -1
ARP3YJR065C RKR1Q04781 1562 aa8.78□□□□□ -1
ARP3YJR065C TGL3P40308 642 aa8.77□□□□□ -1.01
ARP3YJR065C SPT7P35177 1332 aa8.77□□□□□ -1.01
ARP3YJR065C PAN1P32521 1480 aa8.77□□□□□ -1.01
ARP3YJR065C STH1P32597 1359 aa8.76□□□□□ -1.01
ARP3YJR065C YOR1P53049 1477 aa8.76□□□□□ -1.01
ARP3YJR065C NUP170P38181 1502 aa8.76□□□□□ -1.01
ARP3YJR065C DNA2P38859 1522 aa8.76□□□□□ -1.01
ARP3YJR065C RTT106P40161 455 aa8.75□□□□□ -1.01
ARP3YJR065C YPK9Q12697 1472 aa8.75□□□□□ -1.01
ARP3YJR065C BUD4P47136 1447 aa8.74□□□□□ -1.01
ARP3YJR065C ECM5Q03214 1411 aa8.74□□□□□ -1.01
ARP3YJR065C CAB3P36076 571 aa8.74□□□□□ -1.01
ARP3YJR065C OXP1P28273 1286 aa8.73□□□□□ -1.01
ARP3YJR065C IFH1P39520 1085 aa8.73□□□□□ -1.01
ARP3YJR065C SNQ2P32568 1501 aaKnown RBP8.71□□□□□ -1.02
ARP3YJR065C MLP2P40457 1679 aa8.7□□□□□ -1.02
ARP3YJR065C EBP2P36049 427 aaKnown RBP8.65□□□□□ -1.02
ARP3YJR065C ATG2P53855 1592 aa8.65□□□□□ -1.03
ARP3YJR065C GEA1P47102 1408 aaPredicted RBP8.65□□□□□ -1.03
ARP3YJR065C YIL055CP40523 627 aaKnown RBP8.64□□□□□ -1.03
ARP3YJR065C PTP3P40048 928 aa8.63□□□□□ -1.03
ARP3YJR065C TSC11P40061 1430 aa8.63□□□□□ -1.03
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms