RNA–Protein interactions for RNA: YJR040W

GEF1, Transcript of Voltage-gated chloride channel, yeastyeast

Gene GEF1, Length 2,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GEF1YJR040W SGS1P35187 1447 aa11.24□□□□□ -0.61
GEF1YJR040W INO80P53115 1489 aa11.22□□□□□ -0.61
GEF1YJR040W MON2P48563 1636 aaPredicted RBP11.14□□□□□ -0.63
GEF1YJR040W TCB3Q03640 1545 aaKnown RBP11.13□□□□□ -0.63
GEF1YJR040W TY1B-DR4Q07793 1604 aa10.97□□□□□ -0.65
GEF1YJR040W SWR1Q05471 1514 aa10.8□□□□□ -0.68
GEF1YJR040W HSL1P34244 1518 aa10.7□□□□□ -0.7
GEF1YJR040W SPA2P23201 1466 aaKnown RBP10.68□□□□□ -0.7
GEF1YJR040W SPT6P23615 1451 aaKnown RBP10.67□□□□□ -0.7
GEF1YJR040W SSN2P38931 1420 aa10.63□□□□□ -0.71
GEF1YJR040W KOG1P38873 1557 aa10.55□□□□□ -0.72
GEF1YJR040W DNA2P38859 1522 aa10.54□□□□□ -0.72
GEF1YJR040W HIR3P47171 1648 aa10.49□□□□□ -0.73
GEF1YJR040W XRN1P22147 1528 aaKnown RBP10.34□□□□□ -0.75
GEF1YJR040W THO2P53552 1597 aaKnown RBP10.29□□□□□ -0.76
GEF1YJR040W DRS1P32892 752 aaKnown RBP10.26□□□□□ -0.77
GEF1YJR040W BUD4P47136 1447 aa10.23□□□□□ -0.77
GEF1YJR040W REV3P14284 1504 aa10.23□□□□□ -0.77
GEF1YJR040W SIN3P22579 1536 aa10.22□□□□□ -0.77
GEF1YJR040W ECM5Q03214 1411 aa10.16□□□□□ -0.78
GEF1YJR040W SSK2P53599 1579 aa10.1□□□□□ -0.79
GEF1YJR040W ATG2P53855 1592 aa10.06□□□□□ -0.8
GEF1YJR040W MDS3P53094 1487 aa10.06□□□□□ -0.8
GEF1YJR040W PEP1P32319 1579 aa10.03□□□□□ -0.8
GEF1YJR040W ESP1Q03018 1630 aa10□□□□□ -0.81
GEF1YJR040W MYO2P19524 1574 aaKnown RBP9.99□□□□□ -0.81
GEF1YJR040W TAF2P23255 1407 aa9.97□□□□□ -0.81
GEF1YJR040W SKI3P17883 1432 aaKnown RBP9.92□□□□□ -0.82
GEF1YJR040W YPK9Q12697 1472 aa9.9□□□□□ -0.82
GEF1YJR040W RSE1Q04693 1361 aaKnown RBP9.83□□□□□ -0.84
GEF1YJR040W SCC2Q04002 1493 aa9.81□□□□□ -0.84
GEF1YJR040W RPO31P04051 1460 aa9.77□□□□□ -0.84
GEF1YJR040W POL1P13382 1468 aa9.77□□□□□ -0.85
GEF1YJR040W BPT1P14772 1559 aa9.75□□□□□ -0.85
GEF1YJR040W UFD4P33202 1483 aa9.73□□□□□ -0.85
GEF1YJR040W TOP2P06786 1428 aaKnown RBP9.68□□□□□ -0.86
GEF1YJR040W YCF1P39109 1515 aaKnown RBP9.68□□□□□ -0.86
GEF1YJR040W RKR1Q04781 1562 aa9.66□□□□□ -0.86
GEF1YJR040W STU1P38198 1513 aa9.64□□□□□ -0.87
GEF1YJR040W YOR1P53049 1477 aa9.64□□□□□ -0.87
GEF1YJR040W SMC4Q12267 1418 aa9.63□□□□□ -0.87
GEF1YJR040W YTA7P40340 1379 aa9.6□□□□□ -0.87
GEF1YJR040W TY2B-LR1P0C2J3 1770 aa9.6□□□□□ -0.87
GEF1YJR040W TY2B-FP0CX63 1770 aa9.6□□□□□ -0.87
GEF1YJR040W TY2B-GR2P0CX64 1770 aa9.6□□□□□ -0.87
GEF1YJR040W TY2B-CP25384 1770 aa9.6□□□□□ -0.87
GEF1YJR040W TY2B-DR2Q03494 1770 aa9.6□□□□□ -0.87
GEF1YJR040W TY1B-DR1Q03855 1755 aa9.6□□□□□ -0.87
GEF1YJR040W TY2B-DR3Q07791 1770 aaKnown RBP9.6□□□□□ -0.87
GEF1YJR040W TY2B-OR1Q12113 1770 aa9.6□□□□□ -0.87
GEF1YJR040W TY2B-DR1Q12472 1770 aa9.6□□□□□ -0.87
GEF1YJR040W TY2B-OR2Q12501 1770 aa9.6□□□□□ -0.87
GEF1YJR040W CHD1P32657 1468 aa9.57□□□□□ -0.88
GEF1YJR040W MYO4P32492 1471 aa9.56□□□□□ -0.88
GEF1YJR040W CDC25P04821 1589 aa9.54□□□□□ -0.88
GEF1YJR040W TY1B-DR3Q99231 1755 aa9.52□□□□□ -0.89
GEF1YJR040W TY2B-BQ12491 1770 aa9.51□□□□□ -0.89
GEF1YJR040W TY1B-BRQ12193 1756 aa9.5□□□□□ -0.89
GEF1YJR040W TY1B-GR3Q12316 1755 aa9.5□□□□□ -0.89
GEF1YJR040W TY1B-ORQ92393 1755 aa9.5□□□□□ -0.89
GEF1YJR040W MTC1P47018 478 aaKnown RBP9.49□□□□□ -0.89
GEF1YJR040W MMS22Q06164 1454 aa9.49□□□□□ -0.89
GEF1YJR040W PAN1P32521 1480 aa9.49□□□□□ -0.89
GEF1YJR040W TY1B-HO13535 1793 aa9.47□□□□□ -0.89
GEF1YJR040W TY1B-DR5P0C2I2 1755 aa9.47□□□□□ -0.89
GEF1YJR040W TY1B-DR6P0C2I3 1755 aa9.47□□□□□ -0.89
GEF1YJR040W TY1B-LR2P0C2I5 1755 aa9.47□□□□□ -0.89
GEF1YJR040W TY1B-LR3P0C2I6 1755 aaKnown RBP9.47□□□□□ -0.89
GEF1YJR040W TY1B-PR1P0C2I9 1755 aaKnown RBP9.47□□□□□ -0.89
GEF1YJR040W TY1B-PR2P0C2J0 1756 aa9.47□□□□□ -0.89
GEF1YJR040W TY1B-PR3P0C2J1 1755 aaKnown RBP9.47□□□□□ -0.89
GEF1YJR040W TY1B-JR1P47098 1755 aa9.47□□□□□ -0.89
GEF1YJR040W TY1B-ML2Q03434 1755 aaKnown RBP9.47□□□□□ -0.89
GEF1YJR040W TY1B-ER1Q03612 1755 aa9.47□□□□□ -0.89
GEF1YJR040W TY1B-ML1Q04711 1755 aaKnown RBP9.47□□□□□ -0.89
GEF1YJR040W TY1B-GR2Q12269 1755 aa9.47□□□□□ -0.89
GEF1YJR040W TY1B-OLQ12273 1755 aa9.47□□□□□ -0.89
GEF1YJR040W TY1B-PLQ12414 1755 aaKnown RBP9.47□□□□□ -0.89
GEF1YJR040W SPP41P38904 1435 aa9.45□□□□□ -0.9
GEF1YJR040W ESC1Q03661 1658 aaKnown RBP9.4□□□□□ -0.9
GEF1YJR040W TSC11P40061 1430 aa9.39□□□□□ -0.91
GEF1YJR040W RQC2Q12532 1038 aaKnown RBP9.38□□□□□ -0.91
GEF1YJR040W VTH1P40438 1549 aa9.38□□□□□ -0.91
GEF1YJR040W VTH2P40890 1549 aa9.38□□□□□ -0.91
GEF1YJR040W DNF1P32660 1571 aa9.36□□□□□ -0.91
GEF1YJR040W TRM732Q03496 1420 aa9.36□□□□□ -0.91
GEF1YJR040W RPA190P10964 1664 aaKnown RBP9.36□□□□□ -0.91
GEF1YJR040W SNQ2P32568 1501 aaKnown RBP9.34□□□□□ -0.91
GEF1YJR040W MET5P47169 1442 aa9.34□□□□□ -0.91
GEF1YJR040W STH1P32597 1359 aa9.33□□□□□ -0.92
GEF1YJR040W TAF7Q05021 590 aa9.33□□□□□ -0.92
GEF1YJR040W TY1B-JR2P47100 1755 aaKnown RBP9.3□□□□□ -0.92
GEF1YJR040W TY1B-ER2Q03619 1755 aa9.3□□□□□ -0.92
GEF1YJR040W TY1B-MR1Q04214 1755 aa9.3□□□□□ -0.92
GEF1YJR040W TY1B-MR2Q04670 1755 aaKnown RBP9.3□□□□□ -0.92
GEF1YJR040W TY1B-LR1Q12088 1755 aaKnown RBP9.3□□□□□ -0.92
GEF1YJR040W TY1B-NL1Q12112 1755 aa9.3□□□□□ -0.92
GEF1YJR040W TY1B-GR1Q12141 1755 aa9.3□□□□□ -0.92
GEF1YJR040W TY1B-BLQ12490 1755 aa9.3□□□□□ -0.92
GEF1YJR040W NTE1Q04958 1679 aa9.28□□□□□ -0.92
Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms