RNA–Protein interactions for RNA: YJL100W

LSB6, Transcript of Type II phosphatidylinositol 4-kinase, yeastyeast

Gene LSB6, Length 1,824 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSB6YJL100W SGS1P35187 1447 aa15.58■□□□□ 0.09
LSB6YJL100W INO80P53115 1489 aa15.48■□□□□ 0.07
LSB6YJL100W MON2P48563 1636 aaPredicted RBP15.4■□□□□ 0.06
LSB6YJL100W TCB3Q03640 1545 aaKnown RBP15.32■□□□□ 0.04
LSB6YJL100W TY1B-DR4Q07793 1604 aa15.1■□□□□ 0.01
LSB6YJL100W SWR1Q05471 1514 aa14.97□□□□□ -0.01
LSB6YJL100W SPA2P23201 1466 aaKnown RBP14.9□□□□□ -0.02
LSB6YJL100W SSN2P38931 1420 aa14.82□□□□□ -0.04
LSB6YJL100W SPT6P23615 1451 aaKnown RBP14.76□□□□□ -0.05
LSB6YJL100W HSL1P34244 1518 aa14.75□□□□□ -0.05
LSB6YJL100W DNA2P38859 1522 aa14.71□□□□□ -0.05
LSB6YJL100W KOG1P38873 1557 aa14.61□□□□□ -0.07
LSB6YJL100W HIR3P47171 1648 aa14.48□□□□□ -0.09
LSB6YJL100W XRN1P22147 1528 aaKnown RBP14.36□□□□□ -0.11
LSB6YJL100W DRS1P32892 752 aaKnown RBP14.34□□□□□ -0.11
LSB6YJL100W ECM5Q03214 1411 aa14.19□□□□□ -0.14
LSB6YJL100W BUD4P47136 1447 aa14.16□□□□□ -0.14
LSB6YJL100W THO2P53552 1597 aaKnown RBP14.14□□□□□ -0.15
LSB6YJL100W REV3P14284 1504 aa14.11□□□□□ -0.15
LSB6YJL100W TAF2P23255 1407 aa13.99□□□□□ -0.17
LSB6YJL100W SIN3P22579 1536 aa13.96□□□□□ -0.17
LSB6YJL100W MDS3P53094 1487 aa13.91□□□□□ -0.18
LSB6YJL100W RSE1Q04693 1361 aaKnown RBP13.88□□□□□ -0.19
LSB6YJL100W ATG2P53855 1592 aa13.88□□□□□ -0.19
LSB6YJL100W SSK2P53599 1579 aa13.87□□□□□ -0.19
LSB6YJL100W SKI3P17883 1432 aaKnown RBP13.85□□□□□ -0.19
LSB6YJL100W PEP1P32319 1579 aa13.83□□□□□ -0.19
LSB6YJL100W ESP1Q03018 1630 aa13.79□□□□□ -0.2
LSB6YJL100W MYO2P19524 1574 aaKnown RBP13.7□□□□□ -0.22
LSB6YJL100W YPK9Q12697 1472 aa13.62□□□□□ -0.23
LSB6YJL100W MTC1P47018 478 aaKnown RBP13.56□□□□□ -0.24
LSB6YJL100W BPT1P14772 1559 aa13.53□□□□□ -0.24
LSB6YJL100W UFD4P33202 1483 aa13.52□□□□□ -0.24
LSB6YJL100W SCC2Q04002 1493 aa13.52□□□□□ -0.24
LSB6YJL100W MMS22Q06164 1454 aa13.49□□□□□ -0.25
LSB6YJL100W RPO31P04051 1460 aa13.47□□□□□ -0.25
LSB6YJL100W CHD1P32657 1468 aa13.45□□□□□ -0.26
LSB6YJL100W POL1P13382 1468 aa13.42□□□□□ -0.26
LSB6YJL100W STU1P38198 1513 aa13.35□□□□□ -0.27
LSB6YJL100W TOP2P06786 1428 aaKnown RBP13.35□□□□□ -0.27
LSB6YJL100W RKR1Q04781 1562 aa13.35□□□□□ -0.27
LSB6YJL100W YCF1P39109 1515 aaKnown RBP13.34□□□□□ -0.27
LSB6YJL100W RQC2Q12532 1038 aaKnown RBP13.31□□□□□ -0.28
LSB6YJL100W TY2B-LR1P0C2J3 1770 aa13.27□□□□□ -0.29
LSB6YJL100W TY2B-FP0CX63 1770 aa13.27□□□□□ -0.29
LSB6YJL100W TY2B-GR2P0CX64 1770 aa13.27□□□□□ -0.29
LSB6YJL100W TY2B-CP25384 1770 aa13.27□□□□□ -0.29
LSB6YJL100W TY2B-DR2Q03494 1770 aa13.27□□□□□ -0.29
LSB6YJL100W TY1B-DR1Q03855 1755 aa13.27□□□□□ -0.29
LSB6YJL100W TY2B-DR3Q07791 1770 aaKnown RBP13.27□□□□□ -0.29
LSB6YJL100W TY2B-OR1Q12113 1770 aa13.27□□□□□ -0.29
LSB6YJL100W TY2B-DR1Q12472 1770 aa13.27□□□□□ -0.29
LSB6YJL100W TY2B-OR2Q12501 1770 aa13.27□□□□□ -0.29
LSB6YJL100W YOR1P53049 1477 aa13.26□□□□□ -0.29
LSB6YJL100W YTA7P40340 1379 aa13.24□□□□□ -0.29
LSB6YJL100W SMC4Q12267 1418 aa13.23□□□□□ -0.29
LSB6YJL100W CDC25P04821 1589 aa13.18□□□□□ -0.3
LSB6YJL100W SAS10Q12136 610 aaPredicted RBP13.17□□□□□ -0.3
LSB6YJL100W TY1B-DR3Q99231 1755 aa13.15□□□□□ -0.3
LSB6YJL100W TY2B-BQ12491 1770 aa13.13□□□□□ -0.31
LSB6YJL100W TY1B-BRQ12193 1756 aa13.12□□□□□ -0.31
LSB6YJL100W TY1B-GR3Q12316 1755 aa13.12□□□□□ -0.31
LSB6YJL100W TY1B-ORQ92393 1755 aa13.12□□□□□ -0.31
LSB6YJL100W PAN1P32521 1480 aa13.12□□□□□ -0.31
LSB6YJL100W MYO4P32492 1471 aa13.08□□□□□ -0.32
LSB6YJL100W SPP41P38904 1435 aa13.07□□□□□ -0.32
LSB6YJL100W TY1B-HO13535 1793 aa13.07□□□□□ -0.32
LSB6YJL100W TY1B-DR5P0C2I2 1755 aa13.07□□□□□ -0.32
LSB6YJL100W TY1B-DR6P0C2I3 1755 aa13.07□□□□□ -0.32
LSB6YJL100W TY1B-LR2P0C2I5 1755 aa13.07□□□□□ -0.32
LSB6YJL100W TY1B-LR3P0C2I6 1755 aaKnown RBP13.07□□□□□ -0.32
LSB6YJL100W TY1B-PR1P0C2I9 1755 aaKnown RBP13.07□□□□□ -0.32
LSB6YJL100W TY1B-PR2P0C2J0 1756 aa13.07□□□□□ -0.32
LSB6YJL100W TY1B-PR3P0C2J1 1755 aaKnown RBP13.07□□□□□ -0.32
LSB6YJL100W TY1B-JR1P47098 1755 aa13.07□□□□□ -0.32
LSB6YJL100W TY1B-ML2Q03434 1755 aaKnown RBP13.07□□□□□ -0.32
LSB6YJL100W TY1B-ER1Q03612 1755 aa13.07□□□□□ -0.32
LSB6YJL100W TY1B-ML1Q04711 1755 aaKnown RBP13.07□□□□□ -0.32
LSB6YJL100W TY1B-GR2Q12269 1755 aa13.07□□□□□ -0.32
LSB6YJL100W TY1B-OLQ12273 1755 aa13.07□□□□□ -0.32
LSB6YJL100W TY1B-PLQ12414 1755 aaKnown RBP13.07□□□□□ -0.32
LSB6YJL100W TRM732Q03496 1420 aa13.05□□□□□ -0.32
LSB6YJL100W ESC1Q03661 1658 aaKnown RBP13.03□□□□□ -0.32
LSB6YJL100W DNF1P32660 1571 aa13□□□□□ -0.33
LSB6YJL100W TSC11P40061 1430 aa12.97□□□□□ -0.33
LSB6YJL100W VTH1P40438 1549 aa12.93□□□□□ -0.34
LSB6YJL100W VTH2P40890 1549 aa12.93□□□□□ -0.34
LSB6YJL100W RPA190P10964 1664 aaKnown RBP12.93□□□□□ -0.34
LSB6YJL100W TAF7Q05021 590 aa12.92□□□□□ -0.34
LSB6YJL100W STH1P32597 1359 aa12.92□□□□□ -0.34
LSB6YJL100W MET5P47169 1442 aa12.91□□□□□ -0.34
LSB6YJL100W IKI3Q06706 1349 aaKnown RBP12.9□□□□□ -0.34
LSB6YJL100W SNQ2P32568 1501 aaKnown RBP12.9□□□□□ -0.34
LSB6YJL100W TY1B-JR2P47100 1755 aaKnown RBP12.85□□□□□ -0.35
LSB6YJL100W TY1B-ER2Q03619 1755 aa12.85□□□□□ -0.35
LSB6YJL100W TY1B-MR1Q04214 1755 aa12.85□□□□□ -0.35
LSB6YJL100W TY1B-MR2Q04670 1755 aaKnown RBP12.85□□□□□ -0.35
LSB6YJL100W TY1B-LR1Q12088 1755 aaKnown RBP12.85□□□□□ -0.35
LSB6YJL100W TY1B-NL1Q12112 1755 aa12.85□□□□□ -0.35
LSB6YJL100W TY1B-GR1Q12141 1755 aa12.85□□□□□ -0.35
Retrieved 100 of 5,963 RNA–protein pairs in 11.3 ms