RNA–Protein interactions for RNA: YHR139C

SPS100, Transcript of Protein required for spore wall maturation, yeastyeast

Gene SPS100, Length 981 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPS100YHR139C MON2P48563 1636 aaPredicted RBP16.37■□□□□ 0.21
SPS100YHR139C INO80P53115 1489 aa16.35■□□□□ 0.21
SPS100YHR139C SGS1P35187 1447 aa16.32■□□□□ 0.2
SPS100YHR139C TCB3Q03640 1545 aaKnown RBP16.13■□□□□ 0.17
SPS100YHR139C TY1B-DR4Q07793 1604 aa16■□□□□ 0.15
SPS100YHR139C SWR1Q05471 1514 aa15.86■□□□□ 0.13
SPS100YHR139C DNA2P38859 1522 aa15.59■□□□□ 0.09
SPS100YHR139C HSL1P34244 1518 aa15.58■□□□□ 0.08
SPS100YHR139C SPT6P23615 1451 aaKnown RBP15.54■□□□□ 0.08
SPS100YHR139C KOG1P38873 1557 aa15.47■□□□□ 0.07
SPS100YHR139C SPA2P23201 1466 aaKnown RBP15.44■□□□□ 0.06
SPS100YHR139C SSN2P38931 1420 aa15.34■□□□□ 0.05
SPS100YHR139C HIR3P47171 1648 aa15.28■□□□□ 0.04
SPS100YHR139C XRN1P22147 1528 aaKnown RBP15.1■□□□□ 0.01
SPS100YHR139C ECM5Q03214 1411 aa14.95□□□□□ -0.02
SPS100YHR139C THO2P53552 1597 aaKnown RBP14.94□□□□□ -0.02
SPS100YHR139C BUD4P47136 1447 aa14.92□□□□□ -0.02
SPS100YHR139C DRS1P32892 752 aaKnown RBP14.87□□□□□ -0.03
SPS100YHR139C REV3P14284 1504 aa14.86□□□□□ -0.03
SPS100YHR139C SIN3P22579 1536 aa14.71□□□□□ -0.05
SPS100YHR139C MDS3P53094 1487 aa14.7□□□□□ -0.06
SPS100YHR139C RSE1Q04693 1361 aaKnown RBP14.69□□□□□ -0.06
SPS100YHR139C TAF2P23255 1407 aa14.68□□□□□ -0.06
SPS100YHR139C ATG2P53855 1592 aa14.68□□□□□ -0.06
SPS100YHR139C PEP1P32319 1579 aa14.64□□□□□ -0.07
SPS100YHR139C SSK2P53599 1579 aa14.62□□□□□ -0.07
SPS100YHR139C SKI3P17883 1432 aaKnown RBP14.54□□□□□ -0.08
SPS100YHR139C ESP1Q03018 1630 aa14.53□□□□□ -0.08
SPS100YHR139C MYO2P19524 1574 aaKnown RBP14.4□□□□□ -0.1
SPS100YHR139C YPK9Q12697 1472 aa14.32□□□□□ -0.12
SPS100YHR139C BPT1P14772 1559 aa14.3□□□□□ -0.12
SPS100YHR139C MTC1P47018 478 aaKnown RBP14.25□□□□□ -0.13
SPS100YHR139C SCC2Q04002 1493 aa14.25□□□□□ -0.13
SPS100YHR139C UFD4P33202 1483 aa14.23□□□□□ -0.13
SPS100YHR139C RPO31P04051 1460 aa14.17□□□□□ -0.14
SPS100YHR139C POL1P13382 1468 aa14.08□□□□□ -0.16
SPS100YHR139C TY2B-LR1P0C2J3 1770 aa14.06□□□□□ -0.16
SPS100YHR139C TY2B-FP0CX63 1770 aa14.06□□□□□ -0.16
SPS100YHR139C TY2B-GR2P0CX64 1770 aa14.06□□□□□ -0.16
SPS100YHR139C TY2B-CP25384 1770 aa14.06□□□□□ -0.16
SPS100YHR139C TY2B-DR2Q03494 1770 aa14.06□□□□□ -0.16
SPS100YHR139C TY1B-DR1Q03855 1755 aa14.06□□□□□ -0.16
SPS100YHR139C TY2B-DR3Q07791 1770 aaKnown RBP14.06□□□□□ -0.16
SPS100YHR139C TY2B-OR1Q12113 1770 aa14.06□□□□□ -0.16
SPS100YHR139C TY2B-DR1Q12472 1770 aa14.06□□□□□ -0.16
SPS100YHR139C TY2B-OR2Q12501 1770 aa14.06□□□□□ -0.16
SPS100YHR139C YCF1P39109 1515 aaKnown RBP14.05□□□□□ -0.16
SPS100YHR139C RKR1Q04781 1562 aa14.03□□□□□ -0.16
SPS100YHR139C TOP2P06786 1428 aaKnown RBP14.01□□□□□ -0.17
SPS100YHR139C STU1P38198 1513 aa14□□□□□ -0.17
SPS100YHR139C TY1B-DR3Q99231 1755 aa13.93□□□□□ -0.18
SPS100YHR139C YOR1P53049 1477 aa13.93□□□□□ -0.18
SPS100YHR139C TY1B-BRQ12193 1756 aa13.92□□□□□ -0.18
SPS100YHR139C TY1B-GR3Q12316 1755 aa13.92□□□□□ -0.18
SPS100YHR139C TY1B-ORQ92393 1755 aa13.92□□□□□ -0.18
SPS100YHR139C CDC25P04821 1589 aa13.92□□□□□ -0.18
SPS100YHR139C TY2B-BQ12491 1770 aa13.91□□□□□ -0.18
SPS100YHR139C RQC2Q12532 1038 aaKnown RBP13.91□□□□□ -0.18
SPS100YHR139C CHD1P32657 1468 aa13.91□□□□□ -0.18
SPS100YHR139C SMC4Q12267 1418 aa13.87□□□□□ -0.19
SPS100YHR139C TY1B-HO13535 1793 aa13.85□□□□□ -0.19
SPS100YHR139C TY1B-DR5P0C2I2 1755 aa13.85□□□□□ -0.19
SPS100YHR139C TY1B-DR6P0C2I3 1755 aa13.85□□□□□ -0.19
SPS100YHR139C TY1B-LR2P0C2I5 1755 aa13.85□□□□□ -0.19
SPS100YHR139C TY1B-LR3P0C2I6 1755 aaKnown RBP13.85□□□□□ -0.19
SPS100YHR139C TY1B-PR1P0C2I9 1755 aaKnown RBP13.85□□□□□ -0.19
SPS100YHR139C TY1B-PR2P0C2J0 1756 aa13.85□□□□□ -0.19
SPS100YHR139C TY1B-PR3P0C2J1 1755 aaKnown RBP13.85□□□□□ -0.19
SPS100YHR139C TY1B-JR1P47098 1755 aa13.85□□□□□ -0.19
SPS100YHR139C TY1B-ML2Q03434 1755 aaKnown RBP13.85□□□□□ -0.19
SPS100YHR139C TY1B-ER1Q03612 1755 aa13.85□□□□□ -0.19
SPS100YHR139C TY1B-ML1Q04711 1755 aaKnown RBP13.85□□□□□ -0.19
SPS100YHR139C TY1B-GR2Q12269 1755 aa13.85□□□□□ -0.19
SPS100YHR139C TY1B-OLQ12273 1755 aa13.85□□□□□ -0.19
SPS100YHR139C TY1B-PLQ12414 1755 aaKnown RBP13.85□□□□□ -0.19
SPS100YHR139C PAN1P32521 1480 aa13.81□□□□□ -0.2
SPS100YHR139C ESC1Q03661 1658 aaKnown RBP13.81□□□□□ -0.2
SPS100YHR139C MMS22Q06164 1454 aa13.8□□□□□ -0.2
SPS100YHR139C YTA7P40340 1379 aa13.79□□□□□ -0.2
SPS100YHR139C DNF1P32660 1571 aa13.75□□□□□ -0.21
SPS100YHR139C SPP41P38904 1435 aa13.72□□□□□ -0.21
SPS100YHR139C MYO4P32492 1471 aa13.7□□□□□ -0.22
SPS100YHR139C RPA190P10964 1664 aaKnown RBP13.69□□□□□ -0.22
SPS100YHR139C TRM732Q03496 1420 aa13.64□□□□□ -0.23
SPS100YHR139C TSC11P40061 1430 aa13.62□□□□□ -0.23
SPS100YHR139C VTH1P40438 1549 aa13.6□□□□□ -0.23
SPS100YHR139C VTH2P40890 1549 aa13.6□□□□□ -0.23
SPS100YHR139C MET5P47169 1442 aa13.6□□□□□ -0.23
SPS100YHR139C TY1B-JR2P47100 1755 aaKnown RBP13.6□□□□□ -0.23
SPS100YHR139C TY1B-ER2Q03619 1755 aa13.6□□□□□ -0.23
SPS100YHR139C TY1B-MR1Q04214 1755 aa13.6□□□□□ -0.23
SPS100YHR139C TY1B-MR2Q04670 1755 aaKnown RBP13.6□□□□□ -0.23
SPS100YHR139C TY1B-LR1Q12088 1755 aaKnown RBP13.6□□□□□ -0.23
SPS100YHR139C TY1B-NL1Q12112 1755 aa13.6□□□□□ -0.23
SPS100YHR139C TY1B-GR1Q12141 1755 aa13.6□□□□□ -0.23
SPS100YHR139C TY1B-BLQ12490 1755 aa13.6□□□□□ -0.23
SPS100YHR139C NTE1Q04958 1679 aa13.5□□□□□ -0.25
SPS100YHR139C SNQ2P32568 1501 aaKnown RBP13.5□□□□□ -0.25
SPS100YHR139C SAS10Q12136 610 aaPredicted RBP13.5□□□□□ -0.25
SPS100YHR139C STH1P32597 1359 aa13.48□□□□□ -0.25
Retrieved 100 of 5,963 RNA–protein pairs in 49.5 ms