RNA–Protein interactions for RNA: YHR083W

SAM35, Transcript of Component of the sorting and assembly machinery (SAM) complex, yeastyeast

Gene SAM35, Length 990 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SAM35YHR083W SGS1P35187 1447 aa17.13■□□□□ 0.33
SAM35YHR083W INO80P53115 1489 aa16.99■□□□□ 0.31
SAM35YHR083W TCB3Q03640 1545 aaKnown RBP16.7■□□□□ 0.26
SAM35YHR083W SPA2P23201 1466 aaKnown RBP16.54■□□□□ 0.24
SAM35YHR083W TY1B-DR4Q07793 1604 aa16.37■□□□□ 0.21
SAM35YHR083W SSN2P38931 1420 aa16.35■□□□□ 0.21
SAM35YHR083W MON2P48563 1636 aaPredicted RBP16.31■□□□□ 0.2
SAM35YHR083W HSL1P34244 1518 aa16.08■□□□□ 0.16
SAM35YHR083W SPT6P23615 1451 aaKnown RBP16.06■□□□□ 0.16
SAM35YHR083W SWR1Q05471 1514 aa15.99■□□□□ 0.15
SAM35YHR083W DRS1P32892 752 aaKnown RBP15.92■□□□□ 0.14
SAM35YHR083W HIR3P47171 1648 aa15.79■□□□□ 0.12
SAM35YHR083W XRN1P22147 1528 aaKnown RBP15.67■□□□□ 0.1
SAM35YHR083W KOG1P38873 1557 aa15.58■□□□□ 0.08
SAM35YHR083W REV3P14284 1504 aa15.49■□□□□ 0.07
SAM35YHR083W THO2P53552 1597 aaKnown RBP15.46■□□□□ 0.07
SAM35YHR083W SIN3P22579 1536 aa15.46■□□□□ 0.07
SAM35YHR083W DNA2P38859 1522 aa15.45■□□□□ 0.06
SAM35YHR083W SSK2P53599 1579 aa15.32■□□□□ 0.04
SAM35YHR083W BUD4P47136 1447 aa15.31■□□□□ 0.04
SAM35YHR083W MYO2P19524 1574 aaKnown RBP15.24■□□□□ 0.03
SAM35YHR083W TAF2P23255 1407 aa15.2■□□□□ 0.02
SAM35YHR083W ESP1Q03018 1630 aa15.17■□□□□ 0.02
SAM35YHR083W ECM5Q03214 1411 aa15.14■□□□□ 0.01
SAM35YHR083W ATG2P53855 1592 aa15.09■□□□□ 0.01
SAM35YHR083W SKI3P17883 1432 aaKnown RBP15.02■□□□□ -0
SAM35YHR083W YPK9Q12697 1472 aa15□□□□□ -0.01
SAM35YHR083W MDS3P53094 1487 aa14.99□□□□□ -0.01
SAM35YHR083W PEP1P32319 1579 aa14.94□□□□□ -0.02
SAM35YHR083W POL1P13382 1468 aa14.92□□□□□ -0.02
SAM35YHR083W CHD1P32657 1468 aa14.89□□□□□ -0.03
SAM35YHR083W YTA7P40340 1379 aa14.82□□□□□ -0.04
SAM35YHR083W SCC2Q04002 1493 aa14.8□□□□□ -0.04
SAM35YHR083W STU1P38198 1513 aa14.79□□□□□ -0.04
SAM35YHR083W RPO31P04051 1460 aa14.75□□□□□ -0.05
SAM35YHR083W MMS22Q06164 1454 aa14.73□□□□□ -0.05
SAM35YHR083W RKR1Q04781 1562 aa14.73□□□□□ -0.05
SAM35YHR083W YOR1P53049 1477 aa14.69□□□□□ -0.06
SAM35YHR083W TOP2P06786 1428 aaKnown RBP14.68□□□□□ -0.06
SAM35YHR083W UFD4P33202 1483 aa14.67□□□□□ -0.06
SAM35YHR083W MYO4P32492 1471 aa14.66□□□□□ -0.06
SAM35YHR083W SMC4Q12267 1418 aa14.65□□□□□ -0.06
SAM35YHR083W YCF1P39109 1515 aaKnown RBP14.61□□□□□ -0.07
SAM35YHR083W BPT1P14772 1559 aa14.53□□□□□ -0.08
SAM35YHR083W TAF7Q05021 590 aa14.5□□□□□ -0.09
SAM35YHR083W TY2B-LR1P0C2J3 1770 aa14.48□□□□□ -0.09
SAM35YHR083W TY2B-FP0CX63 1770 aa14.48□□□□□ -0.09
SAM35YHR083W TY2B-GR2P0CX64 1770 aa14.48□□□□□ -0.09
SAM35YHR083W TY2B-CP25384 1770 aa14.48□□□□□ -0.09
SAM35YHR083W TY2B-DR2Q03494 1770 aa14.48□□□□□ -0.09
SAM35YHR083W TY1B-DR1Q03855 1755 aa14.48□□□□□ -0.09
SAM35YHR083W TY2B-DR3Q07791 1770 aaKnown RBP14.48□□□□□ -0.09
SAM35YHR083W TY2B-OR1Q12113 1770 aa14.48□□□□□ -0.09
SAM35YHR083W TY2B-DR1Q12472 1770 aa14.48□□□□□ -0.09
SAM35YHR083W TY2B-OR2Q12501 1770 aa14.48□□□□□ -0.09
SAM35YHR083W SAS10Q12136 610 aaPredicted RBP14.41□□□□□ -0.1
SAM35YHR083W TY1B-DR3Q99231 1755 aa14.4□□□□□ -0.1
SAM35YHR083W TY2B-BQ12491 1770 aa14.36□□□□□ -0.11
SAM35YHR083W SPP41P38904 1435 aa14.34□□□□□ -0.11
SAM35YHR083W SNQ2P32568 1501 aaKnown RBP14.34□□□□□ -0.11
SAM35YHR083W RSE1Q04693 1361 aaKnown RBP14.33□□□□□ -0.12
SAM35YHR083W STH1P32597 1359 aa14.32□□□□□ -0.12
SAM35YHR083W CDC25P04821 1589 aa14.31□□□□□ -0.12
SAM35YHR083W RQC2Q12532 1038 aaKnown RBP14.29□□□□□ -0.12
SAM35YHR083W TY1B-HO13535 1793 aa14.27□□□□□ -0.12
SAM35YHR083W TY1B-DR5P0C2I2 1755 aa14.27□□□□□ -0.12
SAM35YHR083W TY1B-DR6P0C2I3 1755 aa14.27□□□□□ -0.12
SAM35YHR083W TY1B-LR2P0C2I5 1755 aa14.27□□□□□ -0.12
SAM35YHR083W TY1B-LR3P0C2I6 1755 aaKnown RBP14.27□□□□□ -0.12
SAM35YHR083W TY1B-PR1P0C2I9 1755 aaKnown RBP14.27□□□□□ -0.12
SAM35YHR083W TY1B-PR2P0C2J0 1756 aa14.27□□□□□ -0.12
SAM35YHR083W TY1B-PR3P0C2J1 1755 aaKnown RBP14.27□□□□□ -0.12
SAM35YHR083W TY1B-JR1P47098 1755 aa14.27□□□□□ -0.12
SAM35YHR083W TY1B-ML2Q03434 1755 aaKnown RBP14.27□□□□□ -0.12
SAM35YHR083W TY1B-ER1Q03612 1755 aa14.27□□□□□ -0.12
SAM35YHR083W TY1B-ML1Q04711 1755 aaKnown RBP14.27□□□□□ -0.12
SAM35YHR083W TY1B-GR2Q12269 1755 aa14.27□□□□□ -0.12
SAM35YHR083W TY1B-OLQ12273 1755 aa14.27□□□□□ -0.12
SAM35YHR083W TY1B-PLQ12414 1755 aaKnown RBP14.27□□□□□ -0.12
SAM35YHR083W TY1B-BRQ12193 1756 aa14.26□□□□□ -0.13
SAM35YHR083W TY1B-GR3Q12316 1755 aa14.26□□□□□ -0.13
SAM35YHR083W TY1B-ORQ92393 1755 aa14.26□□□□□ -0.13
SAM35YHR083W MLP2P40457 1679 aa14.26□□□□□ -0.13
SAM35YHR083W PAN1P32521 1480 aa14.25□□□□□ -0.13
SAM35YHR083W TSC11P40061 1430 aa14.24□□□□□ -0.13
SAM35YHR083W VTH1P40438 1549 aa14.23□□□□□ -0.13
SAM35YHR083W VTH2P40890 1549 aa14.23□□□□□ -0.13
SAM35YHR083W PDR15Q04182 1529 aaKnown RBP14.18□□□□□ -0.14
SAM35YHR083W TRM732Q03496 1420 aa14.15□□□□□ -0.14
SAM35YHR083W ESC1Q03661 1658 aaKnown RBP14.13□□□□□ -0.15
SAM35YHR083W IKI3Q06706 1349 aaKnown RBP14.13□□□□□ -0.15
SAM35YHR083W MTC1P47018 478 aaKnown RBP14.09□□□□□ -0.15
SAM35YHR083W ULS1Q08562 1619 aa14.08□□□□□ -0.15
SAM35YHR083W GEA1P47102 1408 aaPredicted RBP14.08□□□□□ -0.15
SAM35YHR083W SNT2P53127 1403 aa14.06□□□□□ -0.16
SAM35YHR083W TY1B-JR2P47100 1755 aaKnown RBP14.04□□□□□ -0.16
SAM35YHR083W TY1B-ER2Q03619 1755 aa14.04□□□□□ -0.16
SAM35YHR083W TY1B-MR1Q04214 1755 aa14.04□□□□□ -0.16
SAM35YHR083W TY1B-MR2Q04670 1755 aaKnown RBP14.04□□□□□ -0.16
SAM35YHR083W TY1B-LR1Q12088 1755 aaKnown RBP14.04□□□□□ -0.16
Retrieved 100 of 5,963 RNA–protein pairs in 17.2 ms