RNA–Protein interactions for RNA: YHR070W

TRM5, Transcript of tRNA(m(1)G37)methyltransferase, yeastyeast

Gene TRM5, Length 1,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM5YHR070W SGS1P35187 1447 aa20.29■□□□□ 0.84
TRM5YHR070W INO80P53115 1489 aa20■□□□□ 0.79
TRM5YHR070W MON2P48563 1636 aaPredicted RBP19.94■□□□□ 0.78
TRM5YHR070W TCB3Q03640 1545 aaKnown RBP19.87■□□□□ 0.77
TRM5YHR070W TY1B-DR4Q07793 1604 aa19.71■□□□□ 0.75
TRM5YHR070W SWR1Q05471 1514 aa19.4■□□□□ 0.7
TRM5YHR070W HSL1P34244 1518 aa19.24■□□□□ 0.67
TRM5YHR070W SSN2P38931 1420 aa19.21■□□□□ 0.67
TRM5YHR070W SPT6P23615 1451 aaKnown RBP19.18■□□□□ 0.66
TRM5YHR070W SPA2P23201 1466 aaKnown RBP19.17■□□□□ 0.66
TRM5YHR070W DNA2P38859 1522 aa18.96■□□□□ 0.63
TRM5YHR070W HIR3P47171 1648 aa18.88■□□□□ 0.61
TRM5YHR070W KOG1P38873 1557 aa18.83■□□□□ 0.6
TRM5YHR070W XRN1P22147 1528 aaKnown RBP18.68■□□□□ 0.58
TRM5YHR070W DRS1P32892 752 aaKnown RBP18.57■□□□□ 0.56
TRM5YHR070W REV3P14284 1504 aa18.41■□□□□ 0.54
TRM5YHR070W THO2P53552 1597 aaKnown RBP18.36■□□□□ 0.53
TRM5YHR070W BUD4P47136 1447 aa18.33■□□□□ 0.52
TRM5YHR070W ECM5Q03214 1411 aa18.32■□□□□ 0.52
TRM5YHR070W SIN3P22579 1536 aa18.28■□□□□ 0.52
TRM5YHR070W SSK2P53599 1579 aa18.15■□□□□ 0.5
TRM5YHR070W TAF2P23255 1407 aa18.14■□□□□ 0.49
TRM5YHR070W ATG2P53855 1592 aa18.11■□□□□ 0.49
TRM5YHR070W MDS3P53094 1487 aa18.05■□□□□ 0.48
TRM5YHR070W PEP1P32319 1579 aa18.03■□□□□ 0.48
TRM5YHR070W ESP1Q03018 1630 aa18.01■□□□□ 0.47
TRM5YHR070W SKI3P17883 1432 aaKnown RBP17.92■□□□□ 0.46
TRM5YHR070W MYO2P19524 1574 aaKnown RBP17.87■□□□□ 0.45
TRM5YHR070W YPK9Q12697 1472 aa17.76■□□□□ 0.43
TRM5YHR070W SCC2Q04002 1493 aa17.64■□□□□ 0.41
TRM5YHR070W RSE1Q04693 1361 aaKnown RBP17.63■□□□□ 0.41
TRM5YHR070W POL1P13382 1468 aa17.55■□□□□ 0.4
TRM5YHR070W RPO31P04051 1460 aa17.55■□□□□ 0.4
TRM5YHR070W UFD4P33202 1483 aa17.53■□□□□ 0.4
TRM5YHR070W BPT1P14772 1559 aa17.49■□□□□ 0.39
TRM5YHR070W STU1P38198 1513 aa17.44■□□□□ 0.38
TRM5YHR070W RKR1Q04781 1562 aa17.41■□□□□ 0.38
TRM5YHR070W YCF1P39109 1515 aaKnown RBP17.41■□□□□ 0.38
TRM5YHR070W TY2B-LR1P0C2J3 1770 aa17.38■□□□□ 0.37
TRM5YHR070W TY2B-FP0CX63 1770 aa17.38■□□□□ 0.37
TRM5YHR070W TY2B-GR2P0CX64 1770 aa17.38■□□□□ 0.37
TRM5YHR070W TY2B-CP25384 1770 aa17.38■□□□□ 0.37
TRM5YHR070W TY2B-DR2Q03494 1770 aa17.38■□□□□ 0.37
TRM5YHR070W TY1B-DR1Q03855 1755 aa17.38■□□□□ 0.37
TRM5YHR070W TY2B-DR3Q07791 1770 aaKnown RBP17.38■□□□□ 0.37
TRM5YHR070W TY2B-OR1Q12113 1770 aa17.38■□□□□ 0.37
TRM5YHR070W TY2B-DR1Q12472 1770 aa17.38■□□□□ 0.37
TRM5YHR070W TY2B-OR2Q12501 1770 aa17.38■□□□□ 0.37
TRM5YHR070W TOP2P06786 1428 aaKnown RBP17.38■□□□□ 0.37
TRM5YHR070W YOR1P53049 1477 aa17.32■□□□□ 0.36
TRM5YHR070W TY1B-DR3Q99231 1755 aa17.25■□□□□ 0.35
TRM5YHR070W SMC4Q12267 1418 aa17.24■□□□□ 0.35
TRM5YHR070W YTA7P40340 1379 aa17.22■□□□□ 0.35
TRM5YHR070W TY2B-BQ12491 1770 aa17.21■□□□□ 0.34
TRM5YHR070W TY1B-BRQ12193 1756 aa17.17■□□□□ 0.34
TRM5YHR070W TY1B-GR3Q12316 1755 aa17.17■□□□□ 0.34
TRM5YHR070W TY1B-ORQ92393 1755 aa17.17■□□□□ 0.34
TRM5YHR070W MTC1P47018 478 aaKnown RBP17.16■□□□□ 0.34
TRM5YHR070W CHD1P32657 1468 aa17.14■□□□□ 0.33
TRM5YHR070W CDC25P04821 1589 aa17.12■□□□□ 0.33
TRM5YHR070W TY1B-HO13535 1793 aa17.12■□□□□ 0.33
TRM5YHR070W TY1B-DR5P0C2I2 1755 aa17.12■□□□□ 0.33
TRM5YHR070W TY1B-DR6P0C2I3 1755 aa17.12■□□□□ 0.33
TRM5YHR070W TY1B-LR2P0C2I5 1755 aa17.12■□□□□ 0.33
TRM5YHR070W TY1B-LR3P0C2I6 1755 aaKnown RBP17.12■□□□□ 0.33
TRM5YHR070W TY1B-PR1P0C2I9 1755 aaKnown RBP17.12■□□□□ 0.33
TRM5YHR070W TY1B-PR2P0C2J0 1756 aa17.12■□□□□ 0.33
TRM5YHR070W TY1B-PR3P0C2J1 1755 aaKnown RBP17.12■□□□□ 0.33
TRM5YHR070W TY1B-JR1P47098 1755 aa17.12■□□□□ 0.33
TRM5YHR070W TY1B-ML2Q03434 1755 aaKnown RBP17.12■□□□□ 0.33
TRM5YHR070W TY1B-ER1Q03612 1755 aa17.12■□□□□ 0.33
TRM5YHR070W TY1B-ML1Q04711 1755 aaKnown RBP17.12■□□□□ 0.33
TRM5YHR070W TY1B-GR2Q12269 1755 aa17.12■□□□□ 0.33
TRM5YHR070W TY1B-OLQ12273 1755 aa17.12■□□□□ 0.33
TRM5YHR070W TY1B-PLQ12414 1755 aaKnown RBP17.12■□□□□ 0.33
TRM5YHR070W MYO4P32492 1471 aa17.1■□□□□ 0.33
TRM5YHR070W MMS22Q06164 1454 aa17.05■□□□□ 0.32
TRM5YHR070W RQC2Q12532 1038 aaKnown RBP17.03■□□□□ 0.32
TRM5YHR070W PAN1P32521 1480 aa17.01■□□□□ 0.31
TRM5YHR070W SPP41P38904 1435 aa16.99■□□□□ 0.31
TRM5YHR070W ESC1Q03661 1658 aaKnown RBP16.93■□□□□ 0.3
TRM5YHR070W DNF1P32660 1571 aa16.91■□□□□ 0.3
TRM5YHR070W TSC11P40061 1430 aa16.87■□□□□ 0.29
TRM5YHR070W SNQ2P32568 1501 aaKnown RBP16.85■□□□□ 0.29
TRM5YHR070W VTH1P40438 1549 aa16.85■□□□□ 0.29
TRM5YHR070W VTH2P40890 1549 aa16.85■□□□□ 0.29
TRM5YHR070W SAS10Q12136 610 aaPredicted RBP16.85■□□□□ 0.29
TRM5YHR070W RPA190P10964 1664 aaKnown RBP16.85■□□□□ 0.29
TRM5YHR070W TY1B-JR2P47100 1755 aaKnown RBP16.82■□□□□ 0.28
TRM5YHR070W TY1B-ER2Q03619 1755 aa16.82■□□□□ 0.28
TRM5YHR070W TY1B-MR1Q04214 1755 aa16.82■□□□□ 0.28
TRM5YHR070W TY1B-MR2Q04670 1755 aaKnown RBP16.82■□□□□ 0.28
TRM5YHR070W TY1B-LR1Q12088 1755 aaKnown RBP16.82■□□□□ 0.28
TRM5YHR070W TY1B-NL1Q12112 1755 aa16.82■□□□□ 0.28
TRM5YHR070W TY1B-GR1Q12141 1755 aa16.82■□□□□ 0.28
TRM5YHR070W TY1B-BLQ12490 1755 aa16.82■□□□□ 0.28
TRM5YHR070W STH1P32597 1359 aa16.78■□□□□ 0.28
TRM5YHR070W TRM732Q03496 1420 aa16.77■□□□□ 0.28
TRM5YHR070W MLP2P40457 1679 aa16.72■□□□□ 0.27
TRM5YHR070W SNT2P53127 1403 aa16.68■□□□□ 0.26
Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms