RNA–Protein interactions for RNA: YHR057C

CPR2, Transcript of Peptidyl-prolyl cis-trans isomerase (cyclophilin), yeastyeast

Gene CPR2, Length 618 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CPR2YHR057C SGS1P35187 1447 aa13.61□□□□□ -0.23
CPR2YHR057C INO80P53115 1489 aa13.33□□□□□ -0.28
CPR2YHR057C TCB3Q03640 1545 aaKnown RBP13.23□□□□□ -0.29
CPR2YHR057C MON2P48563 1636 aaPredicted RBP13.21□□□□□ -0.3
CPR2YHR057C TY1B-DR4Q07793 1604 aa13.05□□□□□ -0.32
CPR2YHR057C SWR1Q05471 1514 aa12.92□□□□□ -0.34
CPR2YHR057C SSN2P38931 1420 aa12.84□□□□□ -0.35
CPR2YHR057C SPT6P23615 1451 aaKnown RBP12.81□□□□□ -0.36
CPR2YHR057C SPA2P23201 1466 aaKnown RBP12.8□□□□□ -0.36
CPR2YHR057C HSL1P34244 1518 aa12.8□□□□□ -0.36
CPR2YHR057C DNA2P38859 1522 aa12.68□□□□□ -0.38
CPR2YHR057C DRS1P32892 752 aaKnown RBP12.61□□□□□ -0.39
CPR2YHR057C HIR3P47171 1648 aa12.59□□□□□ -0.39
CPR2YHR057C KOG1P38873 1557 aa12.56□□□□□ -0.4
CPR2YHR057C XRN1P22147 1528 aaKnown RBP12.52□□□□□ -0.41
CPR2YHR057C TAF2P23255 1407 aa12.29□□□□□ -0.44
CPR2YHR057C ECM5Q03214 1411 aa12.29□□□□□ -0.44
CPR2YHR057C REV3P14284 1504 aa12.28□□□□□ -0.44
CPR2YHR057C BUD4P47136 1447 aa12.24□□□□□ -0.45
CPR2YHR057C THO2P53552 1597 aaKnown RBP12.2□□□□□ -0.46
CPR2YHR057C SIN3P22579 1536 aa12.11□□□□□ -0.47
CPR2YHR057C SKI3P17883 1432 aaKnown RBP12.11□□□□□ -0.47
CPR2YHR057C SSK2P53599 1579 aa12.06□□□□□ -0.48
CPR2YHR057C MDS3P53094 1487 aa12.03□□□□□ -0.48
CPR2YHR057C ATG2P53855 1592 aa12.02□□□□□ -0.49
CPR2YHR057C ESP1Q03018 1630 aa12.01□□□□□ -0.49
CPR2YHR057C RSE1Q04693 1361 aaKnown RBP11.94□□□□□ -0.5
CPR2YHR057C PEP1P32319 1579 aa11.94□□□□□ -0.5
CPR2YHR057C MYO2P19524 1574 aaKnown RBP11.92□□□□□ -0.5
CPR2YHR057C MTC1P47018 478 aaKnown RBP11.82□□□□□ -0.52
CPR2YHR057C YPK9Q12697 1472 aa11.82□□□□□ -0.52
CPR2YHR057C UFD4P33202 1483 aa11.76□□□□□ -0.53
CPR2YHR057C SCC2Q04002 1493 aa11.75□□□□□ -0.53
CPR2YHR057C RQC2Q12532 1038 aaKnown RBP11.72□□□□□ -0.53
CPR2YHR057C BPT1P14772 1559 aa11.71□□□□□ -0.54
CPR2YHR057C STU1P38198 1513 aa11.7□□□□□ -0.54
CPR2YHR057C POL1P13382 1468 aa11.7□□□□□ -0.54
CPR2YHR057C RPO31P04051 1460 aa11.68□□□□□ -0.54
CPR2YHR057C RKR1Q04781 1562 aa11.66□□□□□ -0.54
CPR2YHR057C TOP2P06786 1428 aaKnown RBP11.6□□□□□ -0.55
CPR2YHR057C YCF1P39109 1515 aaKnown RBP11.59□□□□□ -0.55
CPR2YHR057C YTA7P40340 1379 aa11.56□□□□□ -0.56
CPR2YHR057C SAS10Q12136 610 aaPredicted RBP11.56□□□□□ -0.56
CPR2YHR057C YOR1P53049 1477 aa11.56□□□□□ -0.56
CPR2YHR057C TY2B-LR1P0C2J3 1770 aa11.55□□□□□ -0.56
CPR2YHR057C TY2B-FP0CX63 1770 aa11.55□□□□□ -0.56
CPR2YHR057C TY2B-GR2P0CX64 1770 aa11.55□□□□□ -0.56
CPR2YHR057C TY2B-CP25384 1770 aa11.55□□□□□ -0.56
CPR2YHR057C TY2B-DR2Q03494 1770 aa11.55□□□□□ -0.56
CPR2YHR057C TY1B-DR1Q03855 1755 aa11.55□□□□□ -0.56
CPR2YHR057C TY2B-DR3Q07791 1770 aaKnown RBP11.55□□□□□ -0.56
CPR2YHR057C TY2B-OR1Q12113 1770 aa11.55□□□□□ -0.56
CPR2YHR057C TY2B-DR1Q12472 1770 aa11.55□□□□□ -0.56
CPR2YHR057C TY2B-OR2Q12501 1770 aa11.55□□□□□ -0.56
CPR2YHR057C SMC4Q12267 1418 aa11.51□□□□□ -0.57
CPR2YHR057C TY1B-DR3Q99231 1755 aa11.46□□□□□ -0.58
CPR2YHR057C CHD1P32657 1468 aa11.44□□□□□ -0.58
CPR2YHR057C TY2B-BQ12491 1770 aa11.44□□□□□ -0.58
CPR2YHR057C MMS22Q06164 1454 aa11.43□□□□□ -0.58
CPR2YHR057C CDC25P04821 1589 aa11.42□□□□□ -0.58
CPR2YHR057C TY1B-BRQ12193 1756 aa11.41□□□□□ -0.58
CPR2YHR057C TY1B-GR3Q12316 1755 aa11.41□□□□□ -0.58
CPR2YHR057C TY1B-ORQ92393 1755 aa11.41□□□□□ -0.58
CPR2YHR057C MYO4P32492 1471 aa11.38□□□□□ -0.59
CPR2YHR057C SPP41P38904 1435 aa11.38□□□□□ -0.59
CPR2YHR057C PAN1P32521 1480 aa11.38□□□□□ -0.59
CPR2YHR057C TY1B-HO13535 1793 aa11.36□□□□□ -0.59
CPR2YHR057C TY1B-DR5P0C2I2 1755 aa11.36□□□□□ -0.59
CPR2YHR057C TY1B-DR6P0C2I3 1755 aa11.36□□□□□ -0.59
CPR2YHR057C TY1B-LR2P0C2I5 1755 aa11.36□□□□□ -0.59
CPR2YHR057C TY1B-LR3P0C2I6 1755 aaKnown RBP11.36□□□□□ -0.59
CPR2YHR057C TY1B-PR1P0C2I9 1755 aaKnown RBP11.36□□□□□ -0.59
CPR2YHR057C TY1B-PR2P0C2J0 1756 aa11.36□□□□□ -0.59
CPR2YHR057C TY1B-PR3P0C2J1 1755 aaKnown RBP11.36□□□□□ -0.59
CPR2YHR057C TY1B-JR1P47098 1755 aa11.36□□□□□ -0.59
CPR2YHR057C TY1B-ML2Q03434 1755 aaKnown RBP11.36□□□□□ -0.59
CPR2YHR057C TY1B-ER1Q03612 1755 aa11.36□□□□□ -0.59
CPR2YHR057C TY1B-ML1Q04711 1755 aaKnown RBP11.36□□□□□ -0.59
CPR2YHR057C TY1B-GR2Q12269 1755 aa11.36□□□□□ -0.59
CPR2YHR057C TY1B-OLQ12273 1755 aa11.36□□□□□ -0.59
CPR2YHR057C TY1B-PLQ12414 1755 aaKnown RBP11.36□□□□□ -0.59
CPR2YHR057C ESC1Q03661 1658 aaKnown RBP11.34□□□□□ -0.59
CPR2YHR057C STH1P32597 1359 aa11.34□□□□□ -0.59
CPR2YHR057C TAF7Q05021 590 aa11.32□□□□□ -0.6
CPR2YHR057C IFH1P39520 1085 aa11.31□□□□□ -0.6
CPR2YHR057C TRM732Q03496 1420 aa11.29□□□□□ -0.6
CPR2YHR057C SNQ2P32568 1501 aaKnown RBP11.29□□□□□ -0.6
CPR2YHR057C TSC11P40061 1430 aa11.27□□□□□ -0.6
CPR2YHR057C DNF1P32660 1571 aa11.26□□□□□ -0.61
CPR2YHR057C VTH1P40438 1549 aa11.25□□□□□ -0.61
CPR2YHR057C VTH2P40890 1549 aa11.25□□□□□ -0.61
CPR2YHR057C RTT106P40161 455 aa11.24□□□□□ -0.61
CPR2YHR057C RPA190P10964 1664 aaKnown RBP11.2□□□□□ -0.62
CPR2YHR057C MLP2P40457 1679 aa11.19□□□□□ -0.62
CPR2YHR057C TY1B-JR2P47100 1755 aaKnown RBP11.17□□□□□ -0.62
CPR2YHR057C TY1B-ER2Q03619 1755 aa11.17□□□□□ -0.62
CPR2YHR057C TY1B-MR1Q04214 1755 aa11.17□□□□□ -0.62
CPR2YHR057C TY1B-MR2Q04670 1755 aaKnown RBP11.17□□□□□ -0.62
CPR2YHR057C TY1B-LR1Q12088 1755 aaKnown RBP11.17□□□□□ -0.62
CPR2YHR057C TY1B-NL1Q12112 1755 aa11.17□□□□□ -0.62
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms