RNA–Protein interactions for RNA: YGR119C

NUP57, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP57, Length 1,626 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP57YGR119C DRS1P32892 752 aaKnown RBP17.54■□□□□ 0.4
NUP57YGR119C MTC1P47018 478 aaKnown RBP17.18■□□□□ 0.34
NUP57YGR119C BFR2Q06631 534 aaKnown RBP15.3■□□□□ 0.04
NUP57YGR119C DIP2Q12220 943 aaPredicted RBP14.83□□□□□ -0.04
NUP57YGR119C AVT3P36062 692 aa14.7□□□□□ -0.06
NUP57YGR119C TFA1P36100 482 aa14.54□□□□□ -0.08
NUP57YGR119C RSE1Q04693 1361 aaKnown RBP13.9□□□□□ -0.18
NUP57YGR119C ISW2Q08773 1120 aa13.9□□□□□ -0.19
NUP57YGR119C FAP1P53971 965 aa13.81□□□□□ -0.2
NUP57YGR119C RPG1P38249 964 aaKnown RBP13.72□□□□□ -0.21
NUP57YGR119C PRI1P10363 409 aa13.63□□□□□ -0.23
NUP57YGR119C RPL17AP05740 184 aaKnown RBP13.39□□□□□ -0.27
NUP57YGR119C RPL17BP46990 184 aaKnown RBP13.39□□□□□ -0.27
NUP57YGR119C AAD16Q02895 342 aa13.34□□□□□ -0.27
NUP57YGR119C REB1P21538 810 aa13.2□□□□□ -0.3
NUP57YGR119C TSR3Q12094 313 aaKnown RBP12.99□□□□□ -0.33
NUP57YGR119C SPT21P35209 758 aa12.91□□□□□ -0.34
NUP57YGR119C PRY3P47033 881 aa12.91□□□□□ -0.34
NUP57YGR119C RIM101P33400 625 aa12.77□□□□□ -0.37
NUP57YGR119C PTP3P40048 928 aa12.56□□□□□ -0.4
NUP57YGR119C RQC2Q12532 1038 aaKnown RBP12.56□□□□□ -0.4
NUP57YGR119C MON2P48563 1636 aaPredicted RBP12.55□□□□□ -0.4
NUP57YGR119C INO80P53115 1489 aa12.51□□□□□ -0.41
NUP57YGR119C MRPL32P25348 183 aa12.44□□□□□ -0.42
NUP57YGR119C YKR023WP36119 530 aaKnown RBP12.43□□□□□ -0.42
NUP57YGR119C OXP1P28273 1286 aa12.41□□□□□ -0.42
NUP57YGR119C SSP1P38871 571 aa12.34□□□□□ -0.43
NUP57YGR119C YAH1Q12184 172 aaKnown RBP12.29□□□□□ -0.44
NUP57YGR119C YCK3P39962 524 aa12.22□□□□□ -0.45
NUP57YGR119C YIL055CP40523 627 aaKnown RBP12.22□□□□□ -0.45
NUP57YGR119C HOP09932 586 aa12.2□□□□□ -0.46
NUP57YGR119C TFC8Q12308 588 aa12.18□□□□□ -0.46
NUP57YGR119C DCD1P06773 312 aa12.14□□□□□ -0.47
NUP57YGR119C SGS1P35187 1447 aa12.14□□□□□ -0.47
NUP57YGR119C HAA1Q12753 694 aaKnown RBP12.14□□□□□ -0.47
NUP57YGR119C CDC27P38042 758 aa12.12□□□□□ -0.47
NUP57YGR119C YLR271WQ06152 274 aa12.11□□□□□ -0.47
NUP57YGR119C DMA1P38823 416 aa12.11□□□□□ -0.47
NUP57YGR119C ARP8Q12386 881 aaKnown RBP RIP-Chip data12.1□□□□□ -0.47not detected
NUP57YGR119C RSM7P47150 247 aa12.02□□□□□ -0.49
NUP57YGR119C SWR1Q05471 1514 aa11.95□□□□□ -0.5
NUP57YGR119C TCB3Q03640 1545 aaKnown RBP11.93□□□□□ -0.5
NUP57YGR119C DNA2P38859 1522 aa11.92□□□□□ -0.5
NUP57YGR119C SPA2P23201 1466 aaKnown RBP11.91□□□□□ -0.5
NUP57YGR119C TY1B-DR4Q07793 1604 aa11.89□□□□□ -0.51
NUP57YGR119C MGA2P40578 1113 aa11.87□□□□□ -0.51
NUP57YGR119C BCH2P36122 765 aa11.84□□□□□ -0.51
NUP57YGR119C AI2P03876 854 aa11.81□□□□□ -0.52
NUP57YGR119C KOG1P38873 1557 aa11.81□□□□□ -0.52
NUP57YGR119C CST9Q06032 482 aa11.79□□□□□ -0.52
NUP57YGR119C SSN2P38931 1420 aa11.77□□□□□ -0.52
NUP57YGR119C PSD2P53037 1138 aaKnown RBP11.76□□□□□ -0.53
NUP57YGR119C BBC1P47068 1157 aa11.71□□□□□ -0.54
NUP57YGR119C EPS1P40557 701 aa11.67□□□□□ -0.54
NUP57YGR119C SCY1P53009 804 aa11.6□□□□□ -0.55
NUP57YGR119C BDF1P35817 686 aa11.57□□□□□ -0.56
NUP57YGR119C MAP2P38174 421 aaKnown RBP11.57□□□□□ -0.56
NUP57YGR119C UBP10P53874 792 aaPredicted RBP11.55□□□□□ -0.56
NUP57YGR119C YGL015CP33199 130 aa11.49□□□□□ -0.57
NUP57YGR119C MRM1P25270 412 aa11.48□□□□□ -0.57
NUP57YGR119C HSL1P34244 1518 aa11.47□□□□□ -0.57
NUP57YGR119C SPT6P23615 1451 aaKnown RBP11.46□□□□□ -0.58
NUP57YGR119C RCR1P38212 213 aa11.38□□□□□ -0.59
NUP57YGR119C RAM2P29703 316 aa11.37□□□□□ -0.59
NUP57YGR119C SLX5P32828 619 aaKnown RBP11.35□□□□□ -0.59
NUP57YGR119C SAS10Q12136 610 aaPredicted RBP11.34□□□□□ -0.59
NUP57YGR119C RTG3P38165 486 aa11.31□□□□□ -0.6
NUP57YGR119C HIR3P47171 1648 aa11.22□□□□□ -0.61
NUP57YGR119C SET1P38827 1080 aaKnown RBP11.17□□□□□ -0.62
NUP57YGR119C ECM5Q03214 1411 aa11.17□□□□□ -0.62
NUP57YGR119C VPS29P38759 282 aa11.17□□□□□ -0.62
NUP57YGR119C MAK11P20484 414 aaKnown RBP11.16□□□□□ -0.62
NUP57YGR119C THO2P53552 1597 aaKnown RBP11.15□□□□□ -0.62
NUP57YGR119C BUD4P47136 1447 aa11.11□□□□□ -0.63
NUP57YGR119C TIF4632P39936 914 aaKnown RBP11.06□□□□□ -0.64
NUP57YGR119C LEU3P08638 886 aa11.06□□□□□ -0.64
NUP57YGR119C YMR1P47147 688 aaKnown RBP RIP-Chip data11.06□□□□□ -0.64not detected
NUP57YGR119C XRN1P22147 1528 aaKnown RBP11.03□□□□□ -0.64
NUP57YGR119C LEO1P38439 464 aa11.03□□□□□ -0.64
NUP57YGR119C STS1P38637 319 aa11.03□□□□□ -0.64
NUP57YGR119C YPR148CQ06523 435 aa11.02□□□□□ -0.64
NUP57YGR119C MDS3P53094 1487 aa11□□□□□ -0.65
NUP57YGR119C COQ8P27697 501 aa11□□□□□ -0.65
NUP57YGR119C VPS70P47161 811 aa11□□□□□ -0.65
NUP57YGR119C DBP1P24784 617 aaKnown RBP10.99□□□□□ -0.65
NUP57YGR119C YFR006WP43590 535 aa10.99□□□□□ -0.65
NUP57YGR119C IFH1P39520 1085 aa10.98□□□□□ -0.65
NUP57YGR119C YOR238WQ08634 303 aa10.98□□□□□ -0.65
NUP57YGR119C TGL3P40308 642 aa10.95□□□□□ -0.66
NUP57YGR119C MIF2P35201 549 aa10.95□□□□□ -0.66
NUP57YGR119C REV3P14284 1504 aa10.94□□□□□ -0.66
NUP57YGR119C NSR1P27476 414 aaKnown RBP RIP-Chip data10.93□□□□□ -0.66not detected
NUP57YGR119C CKB1P43639 278 aa10.91□□□□□ -0.66
NUP57YGR119C SIN3P22579 1536 aa10.9□□□□□ -0.66
NUP57YGR119C EDS1P38073 919 aa10.9□□□□□ -0.66
NUP57YGR119C YAP5P40574 245 aa10.9□□□□□ -0.66
NUP57YGR119C PIB1Q06651 286 aa10.9□□□□□ -0.66
NUP57YGR119C PEP1P32319 1579 aa10.89□□□□□ -0.67
NUP57YGR119C SKI3P17883 1432 aaKnown RBP10.87□□□□□ -0.67
NUP57YGR119C SPB4P25808 606 aaPredicted RBP10.86□□□□□ -0.67
Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms