RNA–Protein interactions for RNA: YGL225W

VRG4, Transcript of Golgi GDP-mannose transporter, yeastyeast

Gene VRG4, Length 1,014 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VRG4YGL225W MON2P48563 1636 aaPredicted RBP17.82■□□□□ 0.44
VRG4YGL225W INO80P53115 1489 aa17.77■□□□□ 0.44
VRG4YGL225W SGS1P35187 1447 aa17.48■□□□□ 0.39
VRG4YGL225W TCB3Q03640 1545 aaKnown RBP17.41■□□□□ 0.38
VRG4YGL225W TY1B-DR4Q07793 1604 aa17.25■□□□□ 0.35
VRG4YGL225W SWR1Q05471 1514 aa17.16■□□□□ 0.34
VRG4YGL225W DNA2P38859 1522 aa16.95■□□□□ 0.3
VRG4YGL225W KOG1P38873 1557 aa16.79■□□□□ 0.28
VRG4YGL225W HSL1P34244 1518 aa16.75■□□□□ 0.27
VRG4YGL225W SPT6P23615 1451 aaKnown RBP16.73■□□□□ 0.27
VRG4YGL225W SPA2P23201 1466 aaKnown RBP16.58■□□□□ 0.24
VRG4YGL225W HIR3P47171 1648 aa16.42■□□□□ 0.22
VRG4YGL225W SSN2P38931 1420 aa16.35■□□□□ 0.21
VRG4YGL225W XRN1P22147 1528 aaKnown RBP16.19■□□□□ 0.18
VRG4YGL225W ECM5Q03214 1411 aa16.17■□□□□ 0.18
VRG4YGL225W THO2P53552 1597 aaKnown RBP16.13■□□□□ 0.17
VRG4YGL225W BUD4P47136 1447 aa16.12■□□□□ 0.17
VRG4YGL225W RSE1Q04693 1361 aaKnown RBP16.02■□□□□ 0.16
VRG4YGL225W REV3P14284 1504 aa15.92■□□□□ 0.14
VRG4YGL225W MDS3P53094 1487 aa15.88■□□□□ 0.13
VRG4YGL225W DRS1P32892 752 aaKnown RBP15.83■□□□□ 0.12
VRG4YGL225W PEP1P32319 1579 aa15.82■□□□□ 0.12
VRG4YGL225W SIN3P22579 1536 aa15.8■□□□□ 0.12
VRG4YGL225W ATG2P53855 1592 aa15.79■□□□□ 0.12
VRG4YGL225W TAF2P23255 1407 aa15.69■□□□□ 0.1
VRG4YGL225W SSK2P53599 1579 aa15.66■□□□□ 0.1
VRG4YGL225W SKI3P17883 1432 aaKnown RBP15.6■□□□□ 0.09
VRG4YGL225W ESP1Q03018 1630 aa15.54■□□□□ 0.08
VRG4YGL225W BPT1P14772 1559 aa15.43■□□□□ 0.06
VRG4YGL225W MTC1P47018 478 aaKnown RBP15.41■□□□□ 0.06
VRG4YGL225W MYO2P19524 1574 aaKnown RBP15.41■□□□□ 0.06
VRG4YGL225W YPK9Q12697 1472 aa15.4■□□□□ 0.06
VRG4YGL225W UFD4P33202 1483 aa15.3■□□□□ 0.04
VRG4YGL225W SCC2Q04002 1493 aa15.3■□□□□ 0.04
VRG4YGL225W RPO31P04051 1460 aa15.25■□□□□ 0.03
VRG4YGL225W YCF1P39109 1515 aaKnown RBP15.18■□□□□ 0.02
VRG4YGL225W POL1P13382 1468 aa15.08■□□□□ 0
VRG4YGL225W TOP2P06786 1428 aaKnown RBP15.06■□□□□ 0
VRG4YGL225W TY2B-LR1P0C2J3 1770 aa15.05■□□□□ -0
VRG4YGL225W TY2B-FP0CX63 1770 aa15.05■□□□□ -0
VRG4YGL225W TY2B-GR2P0CX64 1770 aa15.05■□□□□ -0
VRG4YGL225W TY2B-CP25384 1770 aa15.05■□□□□ -0
VRG4YGL225W TY2B-DR2Q03494 1770 aa15.05■□□□□ -0
VRG4YGL225W TY1B-DR1Q03855 1755 aa15.05■□□□□ -0
VRG4YGL225W TY2B-DR3Q07791 1770 aaKnown RBP15.05■□□□□ -0
VRG4YGL225W TY2B-OR1Q12113 1770 aa15.05■□□□□ -0
VRG4YGL225W TY2B-DR1Q12472 1770 aa15.05■□□□□ -0
VRG4YGL225W TY2B-OR2Q12501 1770 aa15.05■□□□□ -0
VRG4YGL225W CHD1P32657 1468 aa15.01□□□□□ -0.01
VRG4YGL225W RKR1Q04781 1562 aa14.99□□□□□ -0.01
VRG4YGL225W CDC25P04821 1589 aa14.98□□□□□ -0.01
VRG4YGL225W TY1B-BRQ12193 1756 aa14.93□□□□□ -0.02
VRG4YGL225W TY1B-GR3Q12316 1755 aa14.93□□□□□ -0.02
VRG4YGL225W TY1B-ORQ92393 1755 aa14.93□□□□□ -0.02
VRG4YGL225W STU1P38198 1513 aa14.92□□□□□ -0.02
VRG4YGL225W YOR1P53049 1477 aa14.9□□□□□ -0.02
VRG4YGL225W SMC4Q12267 1418 aa14.89□□□□□ -0.03
VRG4YGL225W PAN1P32521 1480 aa14.89□□□□□ -0.03
VRG4YGL225W TY2B-BQ12491 1770 aa14.88□□□□□ -0.03
VRG4YGL225W TY1B-DR3Q99231 1755 aa14.88□□□□□ -0.03
VRG4YGL225W RQC2Q12532 1038 aaKnown RBP14.87□□□□□ -0.03
VRG4YGL225W TY1B-HO13535 1793 aa14.84□□□□□ -0.03
VRG4YGL225W TY1B-DR5P0C2I2 1755 aa14.84□□□□□ -0.03
VRG4YGL225W TY1B-DR6P0C2I3 1755 aa14.84□□□□□ -0.03
VRG4YGL225W TY1B-LR2P0C2I5 1755 aa14.84□□□□□ -0.03
VRG4YGL225W TY1B-LR3P0C2I6 1755 aaKnown RBP14.84□□□□□ -0.03
VRG4YGL225W TY1B-PR1P0C2I9 1755 aaKnown RBP14.84□□□□□ -0.03
VRG4YGL225W TY1B-PR2P0C2J0 1756 aa14.84□□□□□ -0.03
VRG4YGL225W TY1B-PR3P0C2J1 1755 aaKnown RBP14.84□□□□□ -0.03
VRG4YGL225W TY1B-JR1P47098 1755 aa14.84□□□□□ -0.03
VRG4YGL225W TY1B-ML2Q03434 1755 aaKnown RBP14.84□□□□□ -0.03
VRG4YGL225W TY1B-ER1Q03612 1755 aa14.84□□□□□ -0.03
VRG4YGL225W TY1B-ML1Q04711 1755 aaKnown RBP14.84□□□□□ -0.03
VRG4YGL225W TY1B-GR2Q12269 1755 aa14.84□□□□□ -0.03
VRG4YGL225W TY1B-OLQ12273 1755 aa14.84□□□□□ -0.03
VRG4YGL225W TY1B-PLQ12414 1755 aaKnown RBP14.84□□□□□ -0.03
VRG4YGL225W DNF1P32660 1571 aa14.83□□□□□ -0.04
VRG4YGL225W MMS22Q06164 1454 aa14.82□□□□□ -0.04
VRG4YGL225W ESC1Q03661 1658 aaKnown RBP14.8□□□□□ -0.04
VRG4YGL225W MET5P47169 1442 aa14.77□□□□□ -0.04
VRG4YGL225W YTA7P40340 1379 aa14.73□□□□□ -0.05
VRG4YGL225W SPP41P38904 1435 aa14.73□□□□□ -0.05
VRG4YGL225W RPA190P10964 1664 aaKnown RBP14.72□□□□□ -0.05
VRG4YGL225W TRM732Q03496 1420 aa14.67□□□□□ -0.06
VRG4YGL225W MYO4P32492 1471 aa14.65□□□□□ -0.06
VRG4YGL225W TSC11P40061 1430 aa14.63□□□□□ -0.07
VRG4YGL225W VTH1P40438 1549 aa14.59□□□□□ -0.07
VRG4YGL225W VTH2P40890 1549 aa14.59□□□□□ -0.07
VRG4YGL225W TY1B-JR2P47100 1755 aaKnown RBP14.56□□□□□ -0.08
VRG4YGL225W TY1B-ER2Q03619 1755 aa14.56□□□□□ -0.08
VRG4YGL225W TY1B-MR1Q04214 1755 aa14.56□□□□□ -0.08
VRG4YGL225W TY1B-MR2Q04670 1755 aaKnown RBP14.56□□□□□ -0.08
VRG4YGL225W TY1B-LR1Q12088 1755 aaKnown RBP14.56□□□□□ -0.08
VRG4YGL225W TY1B-NL1Q12112 1755 aa14.56□□□□□ -0.08
VRG4YGL225W TY1B-GR1Q12141 1755 aa14.56□□□□□ -0.08
VRG4YGL225W TY1B-BLQ12490 1755 aa14.56□□□□□ -0.08
VRG4YGL225W LTE1P07866 1435 aa14.51□□□□□ -0.09
VRG4YGL225W NUP159P40477 1460 aa14.5□□□□□ -0.09
VRG4YGL225W NTE1Q04958 1679 aa14.47□□□□□ -0.09
VRG4YGL225W STH1P32597 1359 aa14.45□□□□□ -0.1
Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms