RNA–Protein interactions for RNA: YGL062W

PYC1, Transcript of Pyruvate carboxylase isoform, yeastyeast

Gene PYC1, Length 3,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PYC1YGL062W SGS1P35187 1447 aa9.76□□□□□ -0.85
PYC1YGL062W INO80P53115 1489 aa9.53□□□□□ -0.88
PYC1YGL062W DRS1P32892 752 aaKnown RBP9.49□□□□□ -0.89
PYC1YGL062W RQC2Q12532 1038 aaKnown RBP9.48□□□□□ -0.89
PYC1YGL062W TY1B-DR4Q07793 1604 aa9.42□□□□□ -0.9
PYC1YGL062W SSN2P38931 1420 aa9.4□□□□□ -0.9
PYC1YGL062W TAF7Q05021 590 aa9.38□□□□□ -0.91
PYC1YGL062W SPA2P23201 1466 aaKnown RBP9.34□□□□□ -0.91
PYC1YGL062W TCB3Q03640 1545 aaKnown RBP9.29□□□□□ -0.92
PYC1YGL062W MON2P48563 1636 aaPredicted RBP9.21□□□□□ -0.94
PYC1YGL062W TFA1P36100 482 aa9.16□□□□□ -0.94
PYC1YGL062W HSL1P34244 1518 aa9□□□□□ -0.97
PYC1YGL062W SPT6P23615 1451 aaKnown RBP8.98□□□□□ -0.97
PYC1YGL062W XRN1P22147 1528 aaKnown RBP8.91□□□□□ -0.98
PYC1YGL062W SWR1Q05471 1514 aa8.88□□□□□ -0.99
PYC1YGL062W BFR2Q06631 534 aaKnown RBP8.87□□□□□ -0.99
PYC1YGL062W SIN3P22579 1536 aa8.86□□□□□ -0.99
PYC1YGL062W HIR3P47171 1648 aa8.86□□□□□ -0.99
PYC1YGL062W TAF2P23255 1407 aa8.86□□□□□ -0.99
PYC1YGL062W REV3P14284 1504 aa8.72□□□□□ -1.01
PYC1YGL062W THO2P53552 1597 aaKnown RBP8.7□□□□□ -1.02
PYC1YGL062W SSK2P53599 1579 aa8.66□□□□□ -1.02
PYC1YGL062W RSE1Q04693 1361 aaKnown RBP8.64□□□□□ -1.03
PYC1YGL062W SAS10Q12136 610 aaPredicted RBP8.62□□□□□ -1.03
PYC1YGL062W URN1Q06525 465 aaKnown RBP8.59□□□□□ -1.03
PYC1YGL062W ESP1Q03018 1630 aa8.57□□□□□ -1.04
PYC1YGL062W SKI3P17883 1432 aaKnown RBP8.57□□□□□ -1.04
PYC1YGL062W DNA2P38859 1522 aa8.54□□□□□ -1.04
PYC1YGL062W ATG2P53855 1592 aa8.54□□□□□ -1.04
PYC1YGL062W KOG1P38873 1557 aa8.53□□□□□ -1.04
PYC1YGL062W MMS22Q06164 1454 aa8.53□□□□□ -1.04
PYC1YGL062W CHD1P32657 1468 aa8.52□□□□□ -1.05
PYC1YGL062W ECM5Q03214 1411 aa8.5□□□□□ -1.05
PYC1YGL062W STU1P38198 1513 aa8.5□□□□□ -1.05
PYC1YGL062W PEP1P32319 1579 aa8.5□□□□□ -1.05
PYC1YGL062W MYO2P19524 1574 aaKnown RBP8.48□□□□□ -1.05
PYC1YGL062W BPT1P14772 1559 aa8.46□□□□□ -1.06
PYC1YGL062W BUD4P47136 1447 aa8.45□□□□□ -1.06
PYC1YGL062W POL1P13382 1468 aa8.39□□□□□ -1.07
PYC1YGL062W DMA1P38823 416 aa8.37□□□□□ -1.07
PYC1YGL062W YPK9Q12697 1472 aa8.36□□□□□ -1.07
PYC1YGL062W YTA7P40340 1379 aa8.34□□□□□ -1.07
PYC1YGL062W SCC2Q04002 1493 aa8.34□□□□□ -1.08
PYC1YGL062W TY2B-LR1P0C2J3 1770 aa8.33□□□□□ -1.08
PYC1YGL062W TY2B-FP0CX63 1770 aa8.33□□□□□ -1.08
PYC1YGL062W TY2B-GR2P0CX64 1770 aa8.33□□□□□ -1.08
PYC1YGL062W TY2B-CP25384 1770 aa8.33□□□□□ -1.08
PYC1YGL062W TY2B-DR2Q03494 1770 aa8.33□□□□□ -1.08
PYC1YGL062W TY1B-DR1Q03855 1755 aa8.33□□□□□ -1.08
PYC1YGL062W TY2B-DR3Q07791 1770 aaKnown RBP8.33□□□□□ -1.08
PYC1YGL062W TY2B-OR1Q12113 1770 aa8.33□□□□□ -1.08
PYC1YGL062W TY2B-DR1Q12472 1770 aa8.33□□□□□ -1.08
PYC1YGL062W TY2B-OR2Q12501 1770 aa8.33□□□□□ -1.08
PYC1YGL062W RKR1Q04781 1562 aa8.33□□□□□ -1.08
PYC1YGL062W TY1B-DR3Q99231 1755 aa8.32□□□□□ -1.08
PYC1YGL062W IFH1P39520 1085 aa8.32□□□□□ -1.08
PYC1YGL062W TRM732Q03496 1420 aa8.3□□□□□ -1.08
PYC1YGL062W MDS3P53094 1487 aa8.29□□□□□ -1.08
PYC1YGL062W UFD4P33202 1483 aa8.27□□□□□ -1.09
PYC1YGL062W TY2B-BQ12491 1770 aa8.27□□□□□ -1.09
PYC1YGL062W YOR1P53049 1477 aa8.26□□□□□ -1.09
PYC1YGL062W STH1P32597 1359 aa8.25□□□□□ -1.09
PYC1YGL062W TY1B-BRQ12193 1756 aa8.25□□□□□ -1.09
PYC1YGL062W TY1B-GR3Q12316 1755 aa8.25□□□□□ -1.09
PYC1YGL062W TY1B-ORQ92393 1755 aa8.25□□□□□ -1.09
PYC1YGL062W TY1B-HO13535 1793 aa8.25□□□□□ -1.09
PYC1YGL062W TY1B-DR5P0C2I2 1755 aa8.25□□□□□ -1.09
PYC1YGL062W TY1B-DR6P0C2I3 1755 aa8.25□□□□□ -1.09
PYC1YGL062W TY1B-LR2P0C2I5 1755 aa8.25□□□□□ -1.09
PYC1YGL062W TY1B-LR3P0C2I6 1755 aaKnown RBP8.25□□□□□ -1.09
PYC1YGL062W TY1B-PR1P0C2I9 1755 aaKnown RBP8.25□□□□□ -1.09
PYC1YGL062W TY1B-PR2P0C2J0 1756 aa8.25□□□□□ -1.09
PYC1YGL062W TY1B-PR3P0C2J1 1755 aaKnown RBP8.25□□□□□ -1.09
PYC1YGL062W TY1B-JR1P47098 1755 aa8.25□□□□□ -1.09
PYC1YGL062W TY1B-ML2Q03434 1755 aaKnown RBP8.25□□□□□ -1.09
PYC1YGL062W TY1B-ER1Q03612 1755 aa8.25□□□□□ -1.09
PYC1YGL062W TY1B-ML1Q04711 1755 aaKnown RBP8.25□□□□□ -1.09
PYC1YGL062W TY1B-GR2Q12269 1755 aa8.25□□□□□ -1.09
PYC1YGL062W TY1B-OLQ12273 1755 aa8.25□□□□□ -1.09
PYC1YGL062W TY1B-PLQ12414 1755 aaKnown RBP8.25□□□□□ -1.09
PYC1YGL062W RPO31P04051 1460 aa8.23□□□□□ -1.09
PYC1YGL062W SSM4P40318 1319 aa8.2□□□□□ -1.1
PYC1YGL062W IKI3Q06706 1349 aaKnown RBP8.2□□□□□ -1.1
PYC1YGL062W TOP2P06786 1428 aaKnown RBP8.2□□□□□ -1.1
PYC1YGL062W SNQ2P32568 1501 aaKnown RBP8.18□□□□□ -1.1
PYC1YGL062W YCF1P39109 1515 aaKnown RBP8.17□□□□□ -1.1
PYC1YGL062W MYO4P32492 1471 aa8.16□□□□□ -1.1
PYC1YGL062W NSR1P27476 414 aaKnown RBP RIP-Chip data8.15□□□□□ -1.1not detected
PYC1YGL062W SMC4Q12267 1418 aa8.15□□□□□ -1.11
PYC1YGL062W NUP170P38181 1502 aa8.13□□□□□ -1.11
PYC1YGL062W PDR15Q04182 1529 aaKnown RBP8.13□□□□□ -1.11
PYC1YGL062W LEO1P38439 464 aa8.13□□□□□ -1.11
PYC1YGL062W MLP2P40457 1679 aa8.12□□□□□ -1.11
PYC1YGL062W GEA1P47102 1408 aaPredicted RBP8.1□□□□□ -1.11
PYC1YGL062W IOC4Q04213 475 aa8.09□□□□□ -1.11
PYC1YGL062W RTT106P40161 455 aa8.08□□□□□ -1.12
PYC1YGL062W TY1B-JR2P47100 1755 aaKnown RBP8.08□□□□□ -1.12
PYC1YGL062W TY1B-ER2Q03619 1755 aa8.08□□□□□ -1.12
PYC1YGL062W TY1B-MR1Q04214 1755 aa8.08□□□□□ -1.12
PYC1YGL062W TY1B-MR2Q04670 1755 aaKnown RBP8.08□□□□□ -1.12
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms