RNA–Protein interactions for RNA: YFR037C

RSC8, Transcript of Component of the RSC chromatin remodeling complex, yeastyeast

Gene RSC8, Length 1,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RSC8YFR037C INO80P53115 1489 aa16.37■□□□□ 0.21
RSC8YFR037C MON2P48563 1636 aaPredicted RBP16.35■□□□□ 0.21
RSC8YFR037C SGS1P35187 1447 aa16.34■□□□□ 0.21
RSC8YFR037C TCB3Q03640 1545 aaKnown RBP15.92■□□□□ 0.14
RSC8YFR037C TY1B-DR4Q07793 1604 aa15.79■□□□□ 0.12
RSC8YFR037C SPA2P23201 1466 aaKnown RBP15.76■□□□□ 0.11
RSC8YFR037C SWR1Q05471 1514 aa15.75■□□□□ 0.11
RSC8YFR037C SSN2P38931 1420 aa15.65■□□□□ 0.1
RSC8YFR037C DNA2P38859 1522 aa15.6■□□□□ 0.09
RSC8YFR037C KOG1P38873 1557 aa15.41■□□□□ 0.06
RSC8YFR037C HSL1P34244 1518 aa15.39■□□□□ 0.05
RSC8YFR037C SPT6P23615 1451 aaKnown RBP15.33■□□□□ 0.04
RSC8YFR037C HIR3P47171 1648 aa15.11■□□□□ 0.01
RSC8YFR037C DRS1P32892 752 aaKnown RBP15.09■□□□□ 0.01
RSC8YFR037C XRN1P22147 1528 aaKnown RBP14.97□□□□□ -0.01
RSC8YFR037C ECM5Q03214 1411 aa14.86□□□□□ -0.03
RSC8YFR037C RSE1Q04693 1361 aaKnown RBP14.82□□□□□ -0.04
RSC8YFR037C REV3P14284 1504 aa14.81□□□□□ -0.04
RSC8YFR037C BUD4P47136 1447 aa14.77□□□□□ -0.04
RSC8YFR037C SIN3P22579 1536 aa14.75□□□□□ -0.05
RSC8YFR037C THO2P53552 1597 aaKnown RBP14.75□□□□□ -0.05
RSC8YFR037C SSK2P53599 1579 aa14.65□□□□□ -0.06
RSC8YFR037C MDS3P53094 1487 aa14.56□□□□□ -0.08
RSC8YFR037C ESP1Q03018 1630 aa14.52□□□□□ -0.09
RSC8YFR037C TAF2P23255 1407 aa14.51□□□□□ -0.09
RSC8YFR037C MYO2P19524 1574 aaKnown RBP14.47□□□□□ -0.09
RSC8YFR037C PEP1P32319 1579 aa14.47□□□□□ -0.09
RSC8YFR037C ATG2P53855 1592 aa14.46□□□□□ -0.09
RSC8YFR037C SKI3P17883 1432 aaKnown RBP14.34□□□□□ -0.11
RSC8YFR037C MTC1P47018 478 aaKnown RBP14.31□□□□□ -0.12
RSC8YFR037C YPK9Q12697 1472 aa14.28□□□□□ -0.12
RSC8YFR037C POL1P13382 1468 aa14.23□□□□□ -0.13
RSC8YFR037C BPT1P14772 1559 aa14.17□□□□□ -0.14
RSC8YFR037C CHD1P32657 1468 aa14.17□□□□□ -0.14
RSC8YFR037C SCC2Q04002 1493 aa14.15□□□□□ -0.14
RSC8YFR037C STU1P38198 1513 aa14.13□□□□□ -0.15
RSC8YFR037C MMS22Q06164 1454 aa14.08□□□□□ -0.16
RSC8YFR037C RKR1Q04781 1562 aa14.07□□□□□ -0.16
RSC8YFR037C RPO31P04051 1460 aa14.07□□□□□ -0.16
RSC8YFR037C UFD4P33202 1483 aa14.03□□□□□ -0.16
RSC8YFR037C YOR1P53049 1477 aa14.01□□□□□ -0.17
RSC8YFR037C YTA7P40340 1379 aa14□□□□□ -0.17
RSC8YFR037C YCF1P39109 1515 aaKnown RBP13.96□□□□□ -0.17
RSC8YFR037C TOP2P06786 1428 aaKnown RBP13.96□□□□□ -0.17
RSC8YFR037C TY2B-LR1P0C2J3 1770 aa13.96□□□□□ -0.17
RSC8YFR037C TY2B-FP0CX63 1770 aa13.96□□□□□ -0.17
RSC8YFR037C TY2B-GR2P0CX64 1770 aa13.96□□□□□ -0.17
RSC8YFR037C TY2B-CP25384 1770 aa13.96□□□□□ -0.17
RSC8YFR037C TY2B-DR2Q03494 1770 aa13.96□□□□□ -0.17
RSC8YFR037C TY1B-DR1Q03855 1755 aa13.96□□□□□ -0.17
RSC8YFR037C TY2B-DR3Q07791 1770 aaKnown RBP13.96□□□□□ -0.17
RSC8YFR037C TY2B-OR1Q12113 1770 aa13.96□□□□□ -0.17
RSC8YFR037C TY2B-DR1Q12472 1770 aa13.96□□□□□ -0.17
RSC8YFR037C TY2B-OR2Q12501 1770 aa13.96□□□□□ -0.17
RSC8YFR037C MYO4P32492 1471 aa13.92□□□□□ -0.18
RSC8YFR037C SMC4Q12267 1418 aa13.91□□□□□ -0.18
RSC8YFR037C TY1B-DR3Q99231 1755 aa13.89□□□□□ -0.19
RSC8YFR037C TY2B-BQ12491 1770 aa13.84□□□□□ -0.19
RSC8YFR037C RQC2Q12532 1038 aaKnown RBP13.76□□□□□ -0.21
RSC8YFR037C TY1B-HO13535 1793 aa13.74□□□□□ -0.21
RSC8YFR037C TY1B-DR5P0C2I2 1755 aa13.74□□□□□ -0.21
RSC8YFR037C TY1B-DR6P0C2I3 1755 aa13.74□□□□□ -0.21
RSC8YFR037C TY1B-LR2P0C2I5 1755 aa13.74□□□□□ -0.21
RSC8YFR037C TY1B-LR3P0C2I6 1755 aaKnown RBP13.74□□□□□ -0.21
RSC8YFR037C TY1B-PR1P0C2I9 1755 aaKnown RBP13.74□□□□□ -0.21
RSC8YFR037C TY1B-PR2P0C2J0 1756 aa13.74□□□□□ -0.21
RSC8YFR037C TY1B-PR3P0C2J1 1755 aaKnown RBP13.74□□□□□ -0.21
RSC8YFR037C TY1B-JR1P47098 1755 aa13.74□□□□□ -0.21
RSC8YFR037C TY1B-ML2Q03434 1755 aaKnown RBP13.74□□□□□ -0.21
RSC8YFR037C TY1B-ER1Q03612 1755 aa13.74□□□□□ -0.21
RSC8YFR037C TY1B-ML1Q04711 1755 aaKnown RBP13.74□□□□□ -0.21
RSC8YFR037C TY1B-BRQ12193 1756 aa13.74□□□□□ -0.21
RSC8YFR037C TY1B-GR2Q12269 1755 aa13.74□□□□□ -0.21
RSC8YFR037C TY1B-OLQ12273 1755 aa13.74□□□□□ -0.21
RSC8YFR037C TY1B-GR3Q12316 1755 aa13.74□□□□□ -0.21
RSC8YFR037C TY1B-PLQ12414 1755 aaKnown RBP13.74□□□□□ -0.21
RSC8YFR037C TY1B-ORQ92393 1755 aa13.74□□□□□ -0.21
RSC8YFR037C CDC25P04821 1589 aa13.73□□□□□ -0.21
RSC8YFR037C SAS10Q12136 610 aaPredicted RBP13.7□□□□□ -0.22
RSC8YFR037C SNQ2P32568 1501 aaKnown RBP13.7□□□□□ -0.22
RSC8YFR037C MLP2P40457 1679 aa13.65□□□□□ -0.22
RSC8YFR037C SPP41P38904 1435 aa13.64□□□□□ -0.23
RSC8YFR037C PAN1P32521 1480 aa13.64□□□□□ -0.23
RSC8YFR037C DNF1P32660 1571 aa13.62□□□□□ -0.23
RSC8YFR037C STH1P32597 1359 aa13.6□□□□□ -0.23
RSC8YFR037C ESC1Q03661 1658 aaKnown RBP13.6□□□□□ -0.23
RSC8YFR037C TAF7Q05021 590 aa13.57□□□□□ -0.24
RSC8YFR037C VTH1P40438 1549 aa13.57□□□□□ -0.24
RSC8YFR037C VTH2P40890 1549 aa13.57□□□□□ -0.24
RSC8YFR037C PDR15Q04182 1529 aaKnown RBP13.56□□□□□ -0.24
RSC8YFR037C TRM732Q03496 1420 aa13.55□□□□□ -0.24
RSC8YFR037C TSC11P40061 1430 aa13.54□□□□□ -0.24
RSC8YFR037C ULS1Q08562 1619 aa13.54□□□□□ -0.24
RSC8YFR037C MET5P47169 1442 aa13.52□□□□□ -0.25
RSC8YFR037C TY1B-JR2P47100 1755 aaKnown RBP13.52□□□□□ -0.25
RSC8YFR037C TY1B-ER2Q03619 1755 aa13.52□□□□□ -0.25
RSC8YFR037C TY1B-MR1Q04214 1755 aa13.52□□□□□ -0.25
RSC8YFR037C TY1B-MR2Q04670 1755 aaKnown RBP13.52□□□□□ -0.25
RSC8YFR037C TY1B-LR1Q12088 1755 aaKnown RBP13.52□□□□□ -0.25
RSC8YFR037C TY1B-NL1Q12112 1755 aa13.52□□□□□ -0.25
Retrieved 100 of 5,963 RNA–protein pairs in 11.1 ms