RNA–Protein interactions for RNA: YFL029C

CAK1, Transcript of Cyclin-dependent kinase-activating kinase, yeastyeast

Gene CAK1, Length 1,107 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAK1YFL029C INO80P53115 1489 aa15.13■□□□□ 0.01
CAK1YFL029C MON2P48563 1636 aaPredicted RBP15.09■□□□□ 0.01
CAK1YFL029C SGS1P35187 1447 aa15.01□□□□□ -0.01
CAK1YFL029C TCB3Q03640 1545 aaKnown RBP14.83□□□□□ -0.04
CAK1YFL029C TY1B-DR4Q07793 1604 aa14.66□□□□□ -0.06
CAK1YFL029C SWR1Q05471 1514 aa14.61□□□□□ -0.07
CAK1YFL029C DNA2P38859 1522 aa14.41□□□□□ -0.1
CAK1YFL029C MTC1P47018 478 aaKnown RBP14.36□□□□□ -0.11
CAK1YFL029C HSL1P34244 1518 aa14.31□□□□□ -0.12
CAK1YFL029C SPT6P23615 1451 aaKnown RBP14.29□□□□□ -0.12
CAK1YFL029C KOG1P38873 1557 aa14.25□□□□□ -0.13
CAK1YFL029C SPA2P23201 1466 aaKnown RBP14.19□□□□□ -0.14
CAK1YFL029C SSN2P38931 1420 aa14.07□□□□□ -0.16
CAK1YFL029C HIR3P47171 1648 aa14.02□□□□□ -0.16
CAK1YFL029C XRN1P22147 1528 aaKnown RBP13.87□□□□□ -0.19
CAK1YFL029C ECM5Q03214 1411 aa13.81□□□□□ -0.2
CAK1YFL029C BUD4P47136 1447 aa13.75□□□□□ -0.21
CAK1YFL029C THO2P53552 1597 aaKnown RBP13.71□□□□□ -0.21
CAK1YFL029C DRS1P32892 752 aaKnown RBP13.67□□□□□ -0.22
CAK1YFL029C RSE1Q04693 1361 aaKnown RBP13.63□□□□□ -0.23
CAK1YFL029C REV3P14284 1504 aa13.63□□□□□ -0.23
CAK1YFL029C MDS3P53094 1487 aa13.55□□□□□ -0.24
CAK1YFL029C TAF2P23255 1407 aa13.52□□□□□ -0.25
CAK1YFL029C SIN3P22579 1536 aa13.47□□□□□ -0.25
CAK1YFL029C PEP1P32319 1579 aa13.45□□□□□ -0.26
CAK1YFL029C ATG2P53855 1592 aa13.45□□□□□ -0.26
CAK1YFL029C SKI3P17883 1432 aaKnown RBP13.39□□□□□ -0.27
CAK1YFL029C SSK2P53599 1579 aa13.37□□□□□ -0.27
CAK1YFL029C ESP1Q03018 1630 aa13.26□□□□□ -0.29
CAK1YFL029C MYO2P19524 1574 aaKnown RBP13.15□□□□□ -0.3
CAK1YFL029C YPK9Q12697 1472 aa13.15□□□□□ -0.3
CAK1YFL029C BPT1P14772 1559 aa13.14□□□□□ -0.31
CAK1YFL029C UFD4P33202 1483 aa13.1□□□□□ -0.31
CAK1YFL029C SCC2Q04002 1493 aa13.09□□□□□ -0.31
CAK1YFL029C RPO31P04051 1460 aa13.03□□□□□ -0.32
CAK1YFL029C FAP1P53971 965 aa13□□□□□ -0.33
CAK1YFL029C YCF1P39109 1515 aaKnown RBP12.93□□□□□ -0.34
CAK1YFL029C POL1P13382 1468 aa12.91□□□□□ -0.34
CAK1YFL029C TOP2P06786 1428 aaKnown RBP12.88□□□□□ -0.35
CAK1YFL029C RQC2Q12532 1038 aaKnown RBP12.84□□□□□ -0.35
CAK1YFL029C STU1P38198 1513 aa12.83□□□□□ -0.35
CAK1YFL029C RKR1Q04781 1562 aa12.83□□□□□ -0.36
CAK1YFL029C CHD1P32657 1468 aa12.81□□□□□ -0.36
CAK1YFL029C TY2B-LR1P0C2J3 1770 aa12.79□□□□□ -0.36
CAK1YFL029C TY2B-FP0CX63 1770 aa12.79□□□□□ -0.36
CAK1YFL029C TY2B-GR2P0CX64 1770 aa12.79□□□□□ -0.36
CAK1YFL029C TY2B-CP25384 1770 aa12.79□□□□□ -0.36
CAK1YFL029C TY2B-DR2Q03494 1770 aa12.79□□□□□ -0.36
CAK1YFL029C TY1B-DR1Q03855 1755 aa12.79□□□□□ -0.36
CAK1YFL029C TY2B-DR3Q07791 1770 aaKnown RBP12.79□□□□□ -0.36
CAK1YFL029C TY2B-OR1Q12113 1770 aa12.79□□□□□ -0.36
CAK1YFL029C TY2B-DR1Q12472 1770 aa12.79□□□□□ -0.36
CAK1YFL029C TY2B-OR2Q12501 1770 aa12.79□□□□□ -0.36
CAK1YFL029C YOR1P53049 1477 aa12.78□□□□□ -0.36
CAK1YFL029C CDC25P04821 1589 aa12.77□□□□□ -0.37
CAK1YFL029C SMC4Q12267 1418 aa12.75□□□□□ -0.37
CAK1YFL029C PAN1P32521 1480 aa12.72□□□□□ -0.37
CAK1YFL029C MMS22Q06164 1454 aa12.69□□□□□ -0.38
CAK1YFL029C TY1B-BRQ12193 1756 aa12.69□□□□□ -0.38
CAK1YFL029C TY1B-GR3Q12316 1755 aa12.69□□□□□ -0.38
CAK1YFL029C TY1B-ORQ92393 1755 aa12.69□□□□□ -0.38
CAK1YFL029C YTA7P40340 1379 aa12.67□□□□□ -0.38
CAK1YFL029C TY1B-DR3Q99231 1755 aa12.66□□□□□ -0.38
CAK1YFL029C TY2B-BQ12491 1770 aa12.66□□□□□ -0.38
CAK1YFL029C DNF1P32660 1571 aa12.65□□□□□ -0.38
CAK1YFL029C SPP41P38904 1435 aa12.62□□□□□ -0.39
CAK1YFL029C TY1B-HO13535 1793 aa12.61□□□□□ -0.39
CAK1YFL029C TY1B-DR5P0C2I2 1755 aa12.61□□□□□ -0.39
CAK1YFL029C TY1B-DR6P0C2I3 1755 aa12.61□□□□□ -0.39
CAK1YFL029C TY1B-LR2P0C2I5 1755 aa12.61□□□□□ -0.39
CAK1YFL029C TY1B-LR3P0C2I6 1755 aaKnown RBP12.61□□□□□ -0.39
CAK1YFL029C TY1B-PR1P0C2I9 1755 aaKnown RBP12.61□□□□□ -0.39
CAK1YFL029C TY1B-PR2P0C2J0 1756 aa12.61□□□□□ -0.39
CAK1YFL029C TY1B-PR3P0C2J1 1755 aaKnown RBP12.61□□□□□ -0.39
CAK1YFL029C TY1B-JR1P47098 1755 aa12.61□□□□□ -0.39
CAK1YFL029C TY1B-ML2Q03434 1755 aaKnown RBP12.61□□□□□ -0.39
CAK1YFL029C TY1B-ER1Q03612 1755 aa12.61□□□□□ -0.39
CAK1YFL029C TY1B-ML1Q04711 1755 aaKnown RBP12.61□□□□□ -0.39
CAK1YFL029C TY1B-GR2Q12269 1755 aa12.61□□□□□ -0.39
CAK1YFL029C TY1B-OLQ12273 1755 aa12.61□□□□□ -0.39
CAK1YFL029C TY1B-PLQ12414 1755 aaKnown RBP12.61□□□□□ -0.39
CAK1YFL029C ESC1Q03661 1658 aaKnown RBP12.58□□□□□ -0.4
CAK1YFL029C MET5P47169 1442 aa12.55□□□□□ -0.4
CAK1YFL029C TRM732Q03496 1420 aa12.55□□□□□ -0.4
CAK1YFL029C MYO4P32492 1471 aa12.55□□□□□ -0.4
CAK1YFL029C TSC11P40061 1430 aa12.53□□□□□ -0.4
CAK1YFL029C RPA190P10964 1664 aaKnown RBP12.51□□□□□ -0.41
CAK1YFL029C VTH1P40438 1549 aa12.47□□□□□ -0.41
CAK1YFL029C VTH2P40890 1549 aa12.47□□□□□ -0.41
CAK1YFL029C SAS10Q12136 610 aaPredicted RBP12.41□□□□□ -0.42
CAK1YFL029C NUP159P40477 1460 aa12.4□□□□□ -0.42
CAK1YFL029C STH1P32597 1359 aa12.4□□□□□ -0.42
CAK1YFL029C TY1B-JR2P47100 1755 aaKnown RBP12.38□□□□□ -0.43
CAK1YFL029C TY1B-ER2Q03619 1755 aa12.38□□□□□ -0.43
CAK1YFL029C TY1B-MR1Q04214 1755 aa12.38□□□□□ -0.43
CAK1YFL029C TY1B-MR2Q04670 1755 aaKnown RBP12.38□□□□□ -0.43
CAK1YFL029C TY1B-LR1Q12088 1755 aaKnown RBP12.38□□□□□ -0.43
CAK1YFL029C TY1B-NL1Q12112 1755 aa12.38□□□□□ -0.43
CAK1YFL029C TY1B-GR1Q12141 1755 aa12.38□□□□□ -0.43
CAK1YFL029C TY1B-BLQ12490 1755 aa12.38□□□□□ -0.43
Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms