RNA–Protein interactions for RNA: YER146W

LSM5, Transcript of Lsm (Like Sm) protein, yeastyeast

Gene LSM5, Length 282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSM5YER146W SGS1P35187 1447 aa16.48■□□□□ 0.23
LSM5YER146W INO80P53115 1489 aa16.3■□□□□ 0.2
LSM5YER146W TCB3Q03640 1545 aaKnown RBP16.14■□□□□ 0.18
LSM5YER146W MON2P48563 1636 aaPredicted RBP16.12■□□□□ 0.17
LSM5YER146W TY1B-DR4Q07793 1604 aa15.97■□□□□ 0.15
LSM5YER146W SWR1Q05471 1514 aa15.68■□□□□ 0.1
LSM5YER146W SPA2P23201 1466 aaKnown RBP15.64■□□□□ 0.09
LSM5YER146W SSN2P38931 1420 aa15.62■□□□□ 0.09
LSM5YER146W HSL1P34244 1518 aa15.58■□□□□ 0.08
LSM5YER146W SPT6P23615 1451 aaKnown RBP15.52■□□□□ 0.08
LSM5YER146W DNA2P38859 1522 aa15.3■□□□□ 0.04
LSM5YER146W HIR3P47171 1648 aa15.28■□□□□ 0.04
LSM5YER146W KOG1P38873 1557 aa15.21■□□□□ 0.03
LSM5YER146W XRN1P22147 1528 aaKnown RBP15.11■□□□□ 0.01
LSM5YER146W DRS1P32892 752 aaKnown RBP15.06■□□□□ 0
LSM5YER146W REV3P14284 1504 aa14.9□□□□□ -0.02
LSM5YER146W THO2P53552 1597 aaKnown RBP14.88□□□□□ -0.03
LSM5YER146W SIN3P22579 1536 aa14.87□□□□□ -0.03
LSM5YER146W BUD4P47136 1447 aa14.84□□□□□ -0.03
LSM5YER146W ECM5Q03214 1411 aa14.82□□□□□ -0.04
LSM5YER146W SSK2P53599 1579 aa14.72□□□□□ -0.05
LSM5YER146W ATG2P53855 1592 aa14.65□□□□□ -0.06
LSM5YER146W PEP1P32319 1579 aa14.63□□□□□ -0.07
LSM5YER146W TAF2P23255 1407 aa14.59□□□□□ -0.07
LSM5YER146W MDS3P53094 1487 aa14.58□□□□□ -0.08
LSM5YER146W ESP1Q03018 1630 aa14.56□□□□□ -0.08
LSM5YER146W MYO2P19524 1574 aaKnown RBP14.47□□□□□ -0.09
LSM5YER146W SKI3P17883 1432 aaKnown RBP14.45□□□□□ -0.1
LSM5YER146W YPK9Q12697 1472 aa14.44□□□□□ -0.1
LSM5YER146W SCC2Q04002 1493 aa14.31□□□□□ -0.12
LSM5YER146W POL1P13382 1468 aa14.28□□□□□ -0.12
LSM5YER146W RPO31P04051 1460 aa14.27□□□□□ -0.12
LSM5YER146W UFD4P33202 1483 aa14.19□□□□□ -0.14
LSM5YER146W RSE1Q04693 1361 aaKnown RBP14.15□□□□□ -0.14
LSM5YER146W TOP2P06786 1428 aaKnown RBP14.13□□□□□ -0.15
LSM5YER146W STU1P38198 1513 aa14.12□□□□□ -0.15
LSM5YER146W YCF1P39109 1515 aaKnown RBP14.12□□□□□ -0.15
LSM5YER146W BPT1P14772 1559 aa14.11□□□□□ -0.15
LSM5YER146W RKR1Q04781 1562 aa14.08□□□□□ -0.16
LSM5YER146W YOR1P53049 1477 aa14.07□□□□□ -0.16
LSM5YER146W YTA7P40340 1379 aa14.03□□□□□ -0.16
LSM5YER146W SMC4Q12267 1418 aa14.03□□□□□ -0.16
LSM5YER146W CHD1P32657 1468 aa14.03□□□□□ -0.16
LSM5YER146W TY2B-LR1P0C2J3 1770 aa14.02□□□□□ -0.16
LSM5YER146W TY2B-FP0CX63 1770 aa14.02□□□□□ -0.16
LSM5YER146W TY2B-GR2P0CX64 1770 aa14.02□□□□□ -0.16
LSM5YER146W TY2B-CP25384 1770 aa14.02□□□□□ -0.16
LSM5YER146W TY2B-DR2Q03494 1770 aa14.02□□□□□ -0.16
LSM5YER146W TY1B-DR1Q03855 1755 aa14.02□□□□□ -0.16
LSM5YER146W TY2B-DR3Q07791 1770 aaKnown RBP14.02□□□□□ -0.16
LSM5YER146W TY2B-OR1Q12113 1770 aa14.02□□□□□ -0.16
LSM5YER146W TY2B-DR1Q12472 1770 aa14.02□□□□□ -0.16
LSM5YER146W TY2B-OR2Q12501 1770 aa14.02□□□□□ -0.16
LSM5YER146W MYO4P32492 1471 aa13.93□□□□□ -0.18
LSM5YER146W TY1B-DR3Q99231 1755 aa13.92□□□□□ -0.18
LSM5YER146W TY2B-BQ12491 1770 aa13.88□□□□□ -0.19
LSM5YER146W MMS22Q06164 1454 aa13.87□□□□□ -0.19
LSM5YER146W TY1B-BRQ12193 1756 aa13.86□□□□□ -0.19
LSM5YER146W TY1B-GR3Q12316 1755 aa13.86□□□□□ -0.19
LSM5YER146W TY1B-ORQ92393 1755 aa13.86□□□□□ -0.19
LSM5YER146W CDC25P04821 1589 aa13.84□□□□□ -0.19
LSM5YER146W TY1B-HO13535 1793 aa13.82□□□□□ -0.2
LSM5YER146W TY1B-DR5P0C2I2 1755 aa13.82□□□□□ -0.2
LSM5YER146W TY1B-DR6P0C2I3 1755 aa13.82□□□□□ -0.2
LSM5YER146W TY1B-LR2P0C2I5 1755 aa13.82□□□□□ -0.2
LSM5YER146W TY1B-LR3P0C2I6 1755 aaKnown RBP13.82□□□□□ -0.2
LSM5YER146W TY1B-PR1P0C2I9 1755 aaKnown RBP13.82□□□□□ -0.2
LSM5YER146W TY1B-PR2P0C2J0 1756 aa13.82□□□□□ -0.2
LSM5YER146W TY1B-PR3P0C2J1 1755 aaKnown RBP13.82□□□□□ -0.2
LSM5YER146W TY1B-JR1P47098 1755 aa13.82□□□□□ -0.2
LSM5YER146W TY1B-ML2Q03434 1755 aaKnown RBP13.82□□□□□ -0.2
LSM5YER146W TY1B-ER1Q03612 1755 aa13.82□□□□□ -0.2
LSM5YER146W TY1B-ML1Q04711 1755 aaKnown RBP13.82□□□□□ -0.2
LSM5YER146W TY1B-GR2Q12269 1755 aa13.82□□□□□ -0.2
LSM5YER146W TY1B-OLQ12273 1755 aa13.82□□□□□ -0.2
LSM5YER146W TY1B-PLQ12414 1755 aaKnown RBP13.82□□□□□ -0.2
LSM5YER146W PAN1P32521 1480 aa13.8□□□□□ -0.2
LSM5YER146W SPP41P38904 1435 aa13.77□□□□□ -0.21
LSM5YER146W MTC1P47018 478 aaKnown RBP13.7□□□□□ -0.22
LSM5YER146W TSC11P40061 1430 aa13.7□□□□□ -0.22
LSM5YER146W DNF1P32660 1571 aa13.67□□□□□ -0.22
LSM5YER146W SNQ2P32568 1501 aaKnown RBP13.67□□□□□ -0.22
LSM5YER146W VTH1P40438 1549 aa13.64□□□□□ -0.23
LSM5YER146W VTH2P40890 1549 aa13.64□□□□□ -0.23
LSM5YER146W RQC2Q12532 1038 aaKnown RBP13.63□□□□□ -0.23
LSM5YER146W RPA190P10964 1664 aaKnown RBP13.6□□□□□ -0.23
LSM5YER146W STH1P32597 1359 aa13.59□□□□□ -0.23
LSM5YER146W SNT2P53127 1403 aa13.59□□□□□ -0.23
LSM5YER146W ESC1Q03661 1658 aaKnown RBP13.59□□□□□ -0.23
LSM5YER146W TY1B-JR2P47100 1755 aaKnown RBP13.58□□□□□ -0.23
LSM5YER146W TY1B-ER2Q03619 1755 aa13.58□□□□□ -0.23
LSM5YER146W TY1B-MR1Q04214 1755 aa13.58□□□□□ -0.23
LSM5YER146W TY1B-MR2Q04670 1755 aaKnown RBP13.58□□□□□ -0.23
LSM5YER146W TY1B-LR1Q12088 1755 aaKnown RBP13.58□□□□□ -0.23
LSM5YER146W TY1B-NL1Q12112 1755 aa13.58□□□□□ -0.23
LSM5YER146W TY1B-GR1Q12141 1755 aa13.58□□□□□ -0.23
LSM5YER146W TY1B-BLQ12490 1755 aa13.58□□□□□ -0.23
LSM5YER146W TAF7Q05021 590 aa13.58□□□□□ -0.24
LSM5YER146W TRM732Q03496 1420 aa13.57□□□□□ -0.24
LSM5YER146W SAS10Q12136 610 aaPredicted RBP13.57□□□□□ -0.24
Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms