RNA–Protein interactions for RNA: YER058W

PET117, Transcript of Protein required for assembly of cytochrome c oxidase, yeastyeast

Gene PET117, Length 324 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PET117YER058W SGS1P35187 1447 aa12.96□□□□□ -0.33
PET117YER058W INO80P53115 1489 aa12.84□□□□□ -0.35
PET117YER058W TCB3Q03640 1545 aaKnown RBP12.72□□□□□ -0.37
PET117YER058W MON2P48563 1636 aaPredicted RBP12.65□□□□□ -0.38
PET117YER058W TY1B-DR4Q07793 1604 aa12.5□□□□□ -0.41
PET117YER058W SWR1Q05471 1514 aa12.32□□□□□ -0.44
PET117YER058W SPA2P23201 1466 aaKnown RBP12.31□□□□□ -0.44
PET117YER058W SSN2P38931 1420 aa12.28□□□□□ -0.44
PET117YER058W HSL1P34244 1518 aa12.25□□□□□ -0.45
PET117YER058W SPT6P23615 1451 aaKnown RBP12.23□□□□□ -0.45
PET117YER058W DNA2P38859 1522 aa12.02□□□□□ -0.48
PET117YER058W HIR3P47171 1648 aa12.01□□□□□ -0.49
PET117YER058W KOG1P38873 1557 aa12.01□□□□□ -0.49
PET117YER058W DRS1P32892 752 aaKnown RBP11.92□□□□□ -0.5
PET117YER058W XRN1P22147 1528 aaKnown RBP11.91□□□□□ -0.5
PET117YER058W REV3P14284 1504 aa11.74□□□□□ -0.53
PET117YER058W THO2P53552 1597 aaKnown RBP11.72□□□□□ -0.53
PET117YER058W BUD4P47136 1447 aa11.71□□□□□ -0.53
PET117YER058W SIN3P22579 1536 aa11.68□□□□□ -0.54
PET117YER058W ECM5Q03214 1411 aa11.66□□□□□ -0.54
PET117YER058W SSK2P53599 1579 aa11.58□□□□□ -0.56
PET117YER058W TAF2P23255 1407 aa11.54□□□□□ -0.56
PET117YER058W ATG2P53855 1592 aa11.5□□□□□ -0.57
PET117YER058W MDS3P53094 1487 aa11.5□□□□□ -0.57
PET117YER058W ESP1Q03018 1630 aa11.45□□□□□ -0.58
PET117YER058W PEP1P32319 1579 aa11.45□□□□□ -0.58
PET117YER058W MYO2P19524 1574 aaKnown RBP11.44□□□□□ -0.58
PET117YER058W SKI3P17883 1432 aaKnown RBP11.43□□□□□ -0.58
PET117YER058W YPK9Q12697 1472 aa11.36□□□□□ -0.59
PET117YER058W SCC2Q04002 1493 aa11.25□□□□□ -0.61
PET117YER058W RSE1Q04693 1361 aaKnown RBP11.23□□□□□ -0.61
PET117YER058W POL1P13382 1468 aa11.23□□□□□ -0.61
PET117YER058W RPO31P04051 1460 aa11.21□□□□□ -0.61
PET117YER058W UFD4P33202 1483 aa11.19□□□□□ -0.62
PET117YER058W BPT1P14772 1559 aa11.14□□□□□ -0.63
PET117YER058W STU1P38198 1513 aa11.14□□□□□ -0.63
PET117YER058W TOP2P06786 1428 aaKnown RBP11.12□□□□□ -0.63
PET117YER058W RKR1Q04781 1562 aa11.11□□□□□ -0.63
PET117YER058W YCF1P39109 1515 aaKnown RBP11.09□□□□□ -0.63
PET117YER058W YOR1P53049 1477 aa11.08□□□□□ -0.64
PET117YER058W YTA7P40340 1379 aa11.08□□□□□ -0.64
PET117YER058W SMC4Q12267 1418 aa11.05□□□□□ -0.64
PET117YER058W CHD1P32657 1468 aa11.02□□□□□ -0.65
PET117YER058W MYO4P32492 1471 aa10.98□□□□□ -0.65
PET117YER058W TY2B-LR1P0C2J3 1770 aa10.97□□□□□ -0.65
PET117YER058W TY2B-FP0CX63 1770 aa10.97□□□□□ -0.65
PET117YER058W TY2B-GR2P0CX64 1770 aa10.97□□□□□ -0.65
PET117YER058W TY2B-CP25384 1770 aa10.97□□□□□ -0.65
PET117YER058W TY2B-DR2Q03494 1770 aa10.97□□□□□ -0.65
PET117YER058W TY1B-DR1Q03855 1755 aa10.97□□□□□ -0.65
PET117YER058W TY2B-DR3Q07791 1770 aaKnown RBP10.97□□□□□ -0.65
PET117YER058W TY2B-OR1Q12113 1770 aa10.97□□□□□ -0.65
PET117YER058W TY2B-DR1Q12472 1770 aa10.97□□□□□ -0.65
PET117YER058W TY2B-OR2Q12501 1770 aa10.97□□□□□ -0.65
PET117YER058W MTC1P47018 478 aaKnown RBP10.94□□□□□ -0.66
PET117YER058W MMS22Q06164 1454 aa10.93□□□□□ -0.66
PET117YER058W CDC25P04821 1589 aa10.9□□□□□ -0.66
PET117YER058W RQC2Q12532 1038 aaKnown RBP10.89□□□□□ -0.67
PET117YER058W TY1B-DR3Q99231 1755 aa10.89□□□□□ -0.67
PET117YER058W SPP41P38904 1435 aa10.87□□□□□ -0.67
PET117YER058W TY2B-BQ12491 1770 aa10.87□□□□□ -0.67
PET117YER058W PAN1P32521 1480 aa10.87□□□□□ -0.67
PET117YER058W TY1B-BRQ12193 1756 aa10.84□□□□□ -0.67
PET117YER058W TY1B-GR3Q12316 1755 aa10.84□□□□□ -0.67
PET117YER058W TY1B-ORQ92393 1755 aa10.84□□□□□ -0.67
PET117YER058W TY1B-HO13535 1793 aa10.81□□□□□ -0.68
PET117YER058W TY1B-DR5P0C2I2 1755 aa10.81□□□□□ -0.68
PET117YER058W TY1B-DR6P0C2I3 1755 aa10.81□□□□□ -0.68
PET117YER058W TY1B-LR2P0C2I5 1755 aa10.81□□□□□ -0.68
PET117YER058W TY1B-LR3P0C2I6 1755 aaKnown RBP10.81□□□□□ -0.68
PET117YER058W TY1B-PR1P0C2I9 1755 aaKnown RBP10.81□□□□□ -0.68
PET117YER058W TY1B-PR2P0C2J0 1756 aa10.81□□□□□ -0.68
PET117YER058W TY1B-PR3P0C2J1 1755 aaKnown RBP10.81□□□□□ -0.68
PET117YER058W TY1B-JR1P47098 1755 aa10.81□□□□□ -0.68
PET117YER058W TY1B-ML2Q03434 1755 aaKnown RBP10.81□□□□□ -0.68
PET117YER058W TY1B-ER1Q03612 1755 aa10.81□□□□□ -0.68
PET117YER058W TY1B-ML1Q04711 1755 aaKnown RBP10.81□□□□□ -0.68
PET117YER058W TY1B-GR2Q12269 1755 aa10.81□□□□□ -0.68
PET117YER058W TY1B-OLQ12273 1755 aa10.81□□□□□ -0.68
PET117YER058W TY1B-PLQ12414 1755 aaKnown RBP10.81□□□□□ -0.68
PET117YER058W TAF7Q05021 590 aa10.8□□□□□ -0.68
PET117YER058W TSC11P40061 1430 aa10.79□□□□□ -0.68
PET117YER058W SAS10Q12136 610 aaPredicted RBP10.78□□□□□ -0.68
PET117YER058W SNQ2P32568 1501 aaKnown RBP10.77□□□□□ -0.69
PET117YER058W VTH1P40438 1549 aa10.76□□□□□ -0.69
PET117YER058W VTH2P40890 1549 aa10.76□□□□□ -0.69
PET117YER058W STH1P32597 1359 aa10.76□□□□□ -0.69
PET117YER058W TRM732Q03496 1420 aa10.75□□□□□ -0.69
PET117YER058W ESC1Q03661 1658 aaKnown RBP10.73□□□□□ -0.69
PET117YER058W DNF1P32660 1571 aa10.73□□□□□ -0.69
PET117YER058W RPA190P10964 1664 aaKnown RBP10.67□□□□□ -0.7
PET117YER058W SNT2P53127 1403 aa10.66□□□□□ -0.7
PET117YER058W MET5P47169 1442 aa10.65□□□□□ -0.7
PET117YER058W PDR15Q04182 1529 aaKnown RBP10.63□□□□□ -0.71
PET117YER058W TY1B-JR2P47100 1755 aaKnown RBP10.63□□□□□ -0.71
PET117YER058W TY1B-ER2Q03619 1755 aa10.63□□□□□ -0.71
PET117YER058W TY1B-MR1Q04214 1755 aa10.63□□□□□ -0.71
PET117YER058W TY1B-MR2Q04670 1755 aaKnown RBP10.63□□□□□ -0.71
PET117YER058W TY1B-LR1Q12088 1755 aaKnown RBP10.63□□□□□ -0.71
PET117YER058W TY1B-NL1Q12112 1755 aa10.63□□□□□ -0.71
Retrieved 100 of 5,963 RNA–protein pairs in 168.6 ms