RNA–Protein interactions for RNA: YEL052W

AFG1, Transcript of Protein that may act as a chaperone for cytochrome c oxidase subunits, yeastyeast

Gene AFG1, Length 1,530 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AFG1YEL052W FAP1P53971 965 aa12.9□□□□□ -0.34
AFG1YEL052W MTC1P47018 478 aaKnown RBP12.37□□□□□ -0.43
AFG1YEL052W PRY3P47033 881 aa12.21□□□□□ -0.46
AFG1YEL052W YCK3P39962 524 aa11.51□□□□□ -0.57
AFG1YEL052W AAD16Q02895 342 aa11.45□□□□□ -0.58
AFG1YEL052W HAA1Q12753 694 aaKnown RBP11.35□□□□□ -0.59
AFG1YEL052W PRI1P10363 409 aa11.32□□□□□ -0.6
AFG1YEL052W MON2P48563 1636 aaPredicted RBP11.22□□□□□ -0.61
AFG1YEL052W INO80P53115 1489 aa11.08□□□□□ -0.64
AFG1YEL052W SGS1P35187 1447 aa11.08□□□□□ -0.64
AFG1YEL052W TCB3Q03640 1545 aaKnown RBP11.01□□□□□ -0.65
AFG1YEL052W TY1B-DR4Q07793 1604 aa10.98□□□□□ -0.65
AFG1YEL052W SWR1Q05471 1514 aa10.83□□□□□ -0.68
AFG1YEL052W HSL1P34244 1518 aa10.67□□□□□ -0.7
AFG1YEL052W TSR3Q12094 313 aaKnown RBP10.62□□□□□ -0.71
AFG1YEL052W DNA2P38859 1522 aa10.61□□□□□ -0.71
AFG1YEL052W DRS1P32892 752 aaKnown RBP10.61□□□□□ -0.71
AFG1YEL052W SPT6P23615 1451 aaKnown RBP10.61□□□□□ -0.71
AFG1YEL052W ISW2Q08773 1120 aa10.58□□□□□ -0.72
AFG1YEL052W KOG1P38873 1557 aa10.57□□□□□ -0.72
AFG1YEL052W RPG1P38249 964 aaKnown RBP10.54□□□□□ -0.72
AFG1YEL052W SPA2P23201 1466 aaKnown RBP10.51□□□□□ -0.73
AFG1YEL052W HIR3P47171 1648 aa10.45□□□□□ -0.74
AFG1YEL052W SSN2P38931 1420 aa10.44□□□□□ -0.74
AFG1YEL052W XRN1P22147 1528 aaKnown RBP10.28□□□□□ -0.76
AFG1YEL052W THO2P53552 1597 aaKnown RBP10.24□□□□□ -0.77
AFG1YEL052W YGL015CP33199 130 aa10.21□□□□□ -0.78
AFG1YEL052W MRPL32P25348 183 aa10.19□□□□□ -0.78
AFG1YEL052W BUD4P47136 1447 aa10.17□□□□□ -0.78
AFG1YEL052W REV3P14284 1504 aa10.16□□□□□ -0.78
AFG1YEL052W ECM5Q03214 1411 aa10.14□□□□□ -0.79
AFG1YEL052W SIN3P22579 1536 aa10.11□□□□□ -0.79
AFG1YEL052W BUD31P25337 157 aaPredicted RBP10.07□□□□□ -0.8
AFG1YEL052W ATG2P53855 1592 aa10.06□□□□□ -0.8
AFG1YEL052W MDS3P53094 1487 aa10.06□□□□□ -0.8
AFG1YEL052W PEP1P32319 1579 aa10.03□□□□□ -0.8
AFG1YEL052W SSK2P53599 1579 aa10.03□□□□□ -0.8
AFG1YEL052W ESP1Q03018 1630 aa9.97□□□□□ -0.81
AFG1YEL052W RQC2Q12532 1038 aaKnown RBP9.97□□□□□ -0.81
AFG1YEL052W TAF2P23255 1407 aa9.93□□□□□ -0.82
AFG1YEL052W RSE1Q04693 1361 aaKnown RBP9.9□□□□□ -0.82
AFG1YEL052W MYO2P19524 1574 aaKnown RBP9.89□□□□□ -0.83
AFG1YEL052W SKI3P17883 1432 aaKnown RBP9.85□□□□□ -0.83
AFG1YEL052W YPK9Q12697 1472 aa9.79□□□□□ -0.84
AFG1YEL052W BPT1P14772 1559 aa9.75□□□□□ -0.85
AFG1YEL052W SCC2Q04002 1493 aa9.73□□□□□ -0.85
AFG1YEL052W RPO31P04051 1460 aa9.67□□□□□ -0.86
AFG1YEL052W UFD4P33202 1483 aa9.67□□□□□ -0.86
AFG1YEL052W TY2B-LR1P0C2J3 1770 aa9.67□□□□□ -0.86
AFG1YEL052W TY2B-FP0CX63 1770 aa9.67□□□□□ -0.86
AFG1YEL052W TY2B-GR2P0CX64 1770 aa9.67□□□□□ -0.86
AFG1YEL052W TY2B-CP25384 1770 aa9.67□□□□□ -0.86
AFG1YEL052W TY2B-DR2Q03494 1770 aa9.67□□□□□ -0.86
AFG1YEL052W TY1B-DR1Q03855 1755 aa9.67□□□□□ -0.86
AFG1YEL052W TY2B-DR3Q07791 1770 aaKnown RBP9.67□□□□□ -0.86
AFG1YEL052W TY2B-OR1Q12113 1770 aa9.67□□□□□ -0.86
AFG1YEL052W TY2B-DR1Q12472 1770 aa9.67□□□□□ -0.86
AFG1YEL052W TY2B-OR2Q12501 1770 aa9.67□□□□□ -0.86
AFG1YEL052W POL1P13382 1468 aa9.62□□□□□ -0.87
AFG1YEL052W YCF1P39109 1515 aaKnown RBP9.61□□□□□ -0.87
AFG1YEL052W RKR1Q04781 1562 aa9.6□□□□□ -0.87
AFG1YEL052W TY1B-DR3Q99231 1755 aa9.58□□□□□ -0.88
AFG1YEL052W TY1B-BRQ12193 1756 aa9.57□□□□□ -0.88
AFG1YEL052W TY1B-GR3Q12316 1755 aa9.57□□□□□ -0.88
AFG1YEL052W TY2B-BQ12491 1770 aa9.57□□□□□ -0.88
AFG1YEL052W TY1B-ORQ92393 1755 aa9.57□□□□□ -0.88
AFG1YEL052W TAF7Q05021 590 aa9.56□□□□□ -0.88
AFG1YEL052W TOP2P06786 1428 aaKnown RBP9.55□□□□□ -0.88
AFG1YEL052W STU1P38198 1513 aa9.53□□□□□ -0.88
AFG1YEL052W TY1B-HO13535 1793 aa9.53□□□□□ -0.88
AFG1YEL052W TY1B-DR5P0C2I2 1755 aa9.53□□□□□ -0.88
AFG1YEL052W TY1B-DR6P0C2I3 1755 aa9.53□□□□□ -0.88
AFG1YEL052W TY1B-LR2P0C2I5 1755 aa9.53□□□□□ -0.88
AFG1YEL052W TY1B-LR3P0C2I6 1755 aaKnown RBP9.53□□□□□ -0.88
AFG1YEL052W TY1B-PR1P0C2I9 1755 aaKnown RBP9.53□□□□□ -0.88
AFG1YEL052W TY1B-PR2P0C2J0 1756 aa9.53□□□□□ -0.88
AFG1YEL052W TY1B-PR3P0C2J1 1755 aaKnown RBP9.53□□□□□ -0.88
AFG1YEL052W TY1B-JR1P47098 1755 aa9.53□□□□□ -0.88
AFG1YEL052W TY1B-ML2Q03434 1755 aaKnown RBP9.53□□□□□ -0.88
AFG1YEL052W TY1B-ER1Q03612 1755 aa9.53□□□□□ -0.88
AFG1YEL052W TY1B-ML1Q04711 1755 aaKnown RBP9.53□□□□□ -0.88
AFG1YEL052W TY1B-GR2Q12269 1755 aa9.53□□□□□ -0.88
AFG1YEL052W TY1B-OLQ12273 1755 aa9.53□□□□□ -0.88
AFG1YEL052W TY1B-PLQ12414 1755 aaKnown RBP9.53□□□□□ -0.88
AFG1YEL052W CDC25P04821 1589 aa9.52□□□□□ -0.88
AFG1YEL052W YOR1P53049 1477 aa9.5□□□□□ -0.89
AFG1YEL052W TFA1P36100 482 aa9.5□□□□□ -0.89
AFG1YEL052W ESC1Q03661 1658 aaKnown RBP9.49□□□□□ -0.89
AFG1YEL052W BFR2Q06631 534 aaKnown RBP9.48□□□□□ -0.89
AFG1YEL052W CHD1P32657 1468 aa9.47□□□□□ -0.89
AFG1YEL052W SMC4Q12267 1418 aa9.46□□□□□ -0.89
AFG1YEL052W CDC27P38042 758 aa9.43□□□□□ -0.9
AFG1YEL052W SIS1P25294 352 aaKnown RBP9.42□□□□□ -0.9
AFG1YEL052W PAN1P32521 1480 aa9.41□□□□□ -0.9
AFG1YEL052W RPA190P10964 1664 aaKnown RBP9.4□□□□□ -0.9
AFG1YEL052W MMS22Q06164 1454 aa9.4□□□□□ -0.91
AFG1YEL052W DNF1P32660 1571 aa9.39□□□□□ -0.91
AFG1YEL052W MYO4P32492 1471 aa9.37□□□□□ -0.91
AFG1YEL052W YTA7P40340 1379 aa9.36□□□□□ -0.91
AFG1YEL052W TY1B-JR2P47100 1755 aaKnown RBP9.36□□□□□ -0.91
Retrieved 100 of 5,963 RNA–protein pairs in 15 ms