RNA–Protein interactions for RNA: YDR487C

RIB3, Transcript of 3,4-dihydroxy-2-butanone-4-phosphate synthase (DHBP synthase), yeastyeast

Gene RIB3, Length 627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RIB3YDR487C INO80P53115 1489 aa19.1■□□□□ 0.65
RIB3YDR487C MON2P48563 1636 aaPredicted RBP18.96■□□□□ 0.63
RIB3YDR487C TCB3Q03640 1545 aaKnown RBP18.29■□□□□ 0.52
RIB3YDR487C SGS1P35187 1447 aa18.29■□□□□ 0.52
RIB3YDR487C SWR1Q05471 1514 aa18.21■□□□□ 0.51
RIB3YDR487C DNA2P38859 1522 aa18.16■□□□□ 0.5
RIB3YDR487C TY1B-DR4Q07793 1604 aa18.08■□□□□ 0.48
RIB3YDR487C KOG1P38873 1557 aa17.89■□□□□ 0.45
RIB3YDR487C SPT6P23615 1451 aaKnown RBP17.62■□□□□ 0.41
RIB3YDR487C HSL1P34244 1518 aa17.59■□□□□ 0.41
RIB3YDR487C SPA2P23201 1466 aaKnown RBP17.52■□□□□ 0.4
RIB3YDR487C RSE1Q04693 1361 aaKnown RBP17.46■□□□□ 0.39
RIB3YDR487C HIR3P47171 1648 aa17.23■□□□□ 0.35
RIB3YDR487C ECM5Q03214 1411 aa17.21■□□□□ 0.34
RIB3YDR487C BUD4P47136 1447 aa17.06■□□□□ 0.32
RIB3YDR487C XRN1P22147 1528 aaKnown RBP17.02■□□□□ 0.32
RIB3YDR487C THO2P53552 1597 aaKnown RBP16.98■□□□□ 0.31
RIB3YDR487C SSN2P38931 1420 aa16.93■□□□□ 0.3
RIB3YDR487C MTC1P47018 478 aaKnown RBP16.82■□□□□ 0.28
RIB3YDR487C MDS3P53094 1487 aa16.81■□□□□ 0.28
RIB3YDR487C REV3P14284 1504 aa16.66■□□□□ 0.26
RIB3YDR487C PEP1P32319 1579 aa16.63■□□□□ 0.25
RIB3YDR487C TAF2P23255 1407 aa16.61■□□□□ 0.25
RIB3YDR487C ATG2P53855 1592 aa16.56■□□□□ 0.24
RIB3YDR487C DRS1P32892 752 aaKnown RBP16.53■□□□□ 0.24
RIB3YDR487C SKI3P17883 1432 aaKnown RBP16.53■□□□□ 0.24
RIB3YDR487C SIN3P22579 1536 aa16.42■□□□□ 0.22
RIB3YDR487C BPT1P14772 1559 aa16.37■□□□□ 0.21
RIB3YDR487C SSK2P53599 1579 aa16.3■□□□□ 0.2
RIB3YDR487C ESP1Q03018 1630 aa16.2■□□□□ 0.18
RIB3YDR487C UFD4P33202 1483 aa16.16■□□□□ 0.18
RIB3YDR487C YCF1P39109 1515 aaKnown RBP16.09■□□□□ 0.17
RIB3YDR487C YPK9Q12697 1472 aa16.08■□□□□ 0.16
RIB3YDR487C MYO2P19524 1574 aaKnown RBP16.03■□□□□ 0.16
RIB3YDR487C SCC2Q04002 1493 aa16.03■□□□□ 0.16
RIB3YDR487C RQC2Q12532 1038 aaKnown RBP15.96■□□□□ 0.15
RIB3YDR487C RPO31P04051 1460 aa15.96■□□□□ 0.14
RIB3YDR487C CHD1P32657 1468 aa15.84■□□□□ 0.13
RIB3YDR487C CDC25P04821 1589 aa15.77■□□□□ 0.11
RIB3YDR487C TOP2P06786 1428 aaKnown RBP15.76■□□□□ 0.11
RIB3YDR487C PAN1P32521 1480 aa15.7■□□□□ 0.1
RIB3YDR487C TY2B-LR1P0C2J3 1770 aa15.68■□□□□ 0.1
RIB3YDR487C TY2B-FP0CX63 1770 aa15.68■□□□□ 0.1
RIB3YDR487C TY2B-GR2P0CX64 1770 aa15.68■□□□□ 0.1
RIB3YDR487C TY2B-CP25384 1770 aa15.68■□□□□ 0.1
RIB3YDR487C TY2B-DR2Q03494 1770 aa15.68■□□□□ 0.1
RIB3YDR487C TY1B-DR1Q03855 1755 aa15.68■□□□□ 0.1
RIB3YDR487C TY2B-DR3Q07791 1770 aaKnown RBP15.68■□□□□ 0.1
RIB3YDR487C TY2B-OR1Q12113 1770 aa15.68■□□□□ 0.1
RIB3YDR487C TY2B-DR1Q12472 1770 aa15.68■□□□□ 0.1
RIB3YDR487C TY2B-OR2Q12501 1770 aa15.68■□□□□ 0.1
RIB3YDR487C DNF1P32660 1571 aa15.67■□□□□ 0.1
RIB3YDR487C MET5P47169 1442 aa15.66■□□□□ 0.1
RIB3YDR487C POL1P13382 1468 aa15.65■□□□□ 0.1
RIB3YDR487C RKR1Q04781 1562 aa15.65■□□□□ 0.1
RIB3YDR487C MMS22Q06164 1454 aa15.6■□□□□ 0.09
RIB3YDR487C ESC1Q03661 1658 aaKnown RBP15.59■□□□□ 0.09
RIB3YDR487C TY1B-BRQ12193 1756 aa15.59■□□□□ 0.09
RIB3YDR487C TY1B-GR3Q12316 1755 aa15.59■□□□□ 0.09
RIB3YDR487C TY1B-ORQ92393 1755 aa15.59■□□□□ 0.09
RIB3YDR487C STU1P38198 1513 aa15.57■□□□□ 0.08
RIB3YDR487C SMC4Q12267 1418 aa15.53■□□□□ 0.08
RIB3YDR487C YOR1P53049 1477 aa15.52■□□□□ 0.07
RIB3YDR487C TRM732Q03496 1420 aa15.51■□□□□ 0.07
RIB3YDR487C TY2B-BQ12491 1770 aa15.49■□□□□ 0.07
RIB3YDR487C TY1B-DR3Q99231 1755 aa15.47■□□□□ 0.07
RIB3YDR487C LTE1P07866 1435 aa15.47■□□□□ 0.07
RIB3YDR487C SPP41P38904 1435 aa15.46■□□□□ 0.07
RIB3YDR487C TY1B-HO13535 1793 aa15.46■□□□□ 0.07
RIB3YDR487C TY1B-DR5P0C2I2 1755 aa15.46■□□□□ 0.07
RIB3YDR487C TY1B-DR6P0C2I3 1755 aa15.46■□□□□ 0.07
RIB3YDR487C TY1B-LR2P0C2I5 1755 aa15.46■□□□□ 0.07
RIB3YDR487C TY1B-LR3P0C2I6 1755 aaKnown RBP15.46■□□□□ 0.07
RIB3YDR487C TY1B-PR1P0C2I9 1755 aaKnown RBP15.46■□□□□ 0.07
RIB3YDR487C TY1B-PR2P0C2J0 1756 aa15.46■□□□□ 0.07
RIB3YDR487C TY1B-PR3P0C2J1 1755 aaKnown RBP15.46■□□□□ 0.07
RIB3YDR487C TY1B-JR1P47098 1755 aa15.46■□□□□ 0.07
RIB3YDR487C TY1B-ML2Q03434 1755 aaKnown RBP15.46■□□□□ 0.07
RIB3YDR487C TY1B-ER1Q03612 1755 aa15.46■□□□□ 0.07
RIB3YDR487C TY1B-ML1Q04711 1755 aaKnown RBP15.46■□□□□ 0.07
RIB3YDR487C TY1B-GR2Q12269 1755 aa15.46■□□□□ 0.07
RIB3YDR487C TY1B-OLQ12273 1755 aa15.46■□□□□ 0.07
RIB3YDR487C TY1B-PLQ12414 1755 aaKnown RBP15.46■□□□□ 0.07
RIB3YDR487C RPA190P10964 1664 aaKnown RBP15.44■□□□□ 0.06
RIB3YDR487C TSC11P40061 1430 aa15.34■□□□□ 0.05
RIB3YDR487C NUP159P40477 1460 aa15.32■□□□□ 0.04
RIB3YDR487C YTA7P40340 1379 aa15.31■□□□□ 0.04
RIB3YDR487C GEA2P39993 1459 aaKnown RBP15.31■□□□□ 0.04
RIB3YDR487C ITT1Q04638 464 aa15.3■□□□□ 0.04
RIB3YDR487C VTH1P40438 1549 aa15.27■□□□□ 0.03
RIB3YDR487C VTH2P40890 1549 aa15.27■□□□□ 0.03
RIB3YDR487C MYO4P32492 1471 aa15.2■□□□□ 0.02
RIB3YDR487C VPS15P22219 1454 aa15.2■□□□□ 0.02
RIB3YDR487C MIF2P35201 549 aa15.17■□□□□ 0.02
RIB3YDR487C BNI1P41832 1953 aa15.16■□□□□ 0.02
RIB3YDR487C TY1B-JR2P47100 1755 aaKnown RBP15.16■□□□□ 0.02
RIB3YDR487C TY1B-ER2Q03619 1755 aa15.16■□□□□ 0.02
RIB3YDR487C TY1B-MR1Q04214 1755 aa15.16■□□□□ 0.02
RIB3YDR487C TY1B-MR2Q04670 1755 aaKnown RBP15.16■□□□□ 0.02
RIB3YDR487C TY1B-LR1Q12088 1755 aaKnown RBP15.16■□□□□ 0.02
Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms