RNA–Protein interactions for RNA: YDR353W

TRR1, Transcript of Cytoplasmic thioredoxin reductase, yeastyeast

Gene TRR1, Length 960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRR1YDR353W MTC1P47018 478 aaKnown RBP14.35□□□□□ -0.11
TRR1YDR353W DRS1P32892 752 aaKnown RBP14.06□□□□□ -0.16
TRR1YDR353W DIP2Q12220 943 aaPredicted RBP12.08□□□□□ -0.48
TRR1YDR353W FAP1P53971 965 aa12.07□□□□□ -0.48
TRR1YDR353W BFR2Q06631 534 aaKnown RBP12.03□□□□□ -0.48
TRR1YDR353W AVT3P36062 692 aa11.85□□□□□ -0.51
TRR1YDR353W ISW2Q08773 1120 aa11.75□□□□□ -0.53
TRR1YDR353W PRI1P10363 409 aa11.7□□□□□ -0.54
TRR1YDR353W RPG1P38249 964 aaKnown RBP11.56□□□□□ -0.56
TRR1YDR353W AAD16Q02895 342 aa11.54□□□□□ -0.56
TRR1YDR353W RSE1Q04693 1361 aaKnown RBP11.52□□□□□ -0.57
TRR1YDR353W PRY3P47033 881 aa11.37□□□□□ -0.59
TRR1YDR353W TFA1P36100 482 aa11.13□□□□□ -0.63
TRR1YDR353W RPL17AP05740 184 aaKnown RBP11.08□□□□□ -0.64
TRR1YDR353W RPL17BP46990 184 aaKnown RBP11.08□□□□□ -0.64
TRR1YDR353W TSR3Q12094 313 aaKnown RBP11.05□□□□□ -0.64
TRR1YDR353W REB1P21538 810 aa10.97□□□□□ -0.65
TRR1YDR353W SGS1P35187 1447 aa10.88□□□□□ -0.67
TRR1YDR353W YCK3P39962 524 aa10.86□□□□□ -0.67
TRR1YDR353W HAA1Q12753 694 aaKnown RBP10.72□□□□□ -0.69
TRR1YDR353W INO80P53115 1489 aa10.71□□□□□ -0.69
TRR1YDR353W SPA2P23201 1466 aaKnown RBP10.68□□□□□ -0.7
TRR1YDR353W MRPL32P25348 183 aa10.67□□□□□ -0.7
TRR1YDR353W SPT21P35209 758 aa10.67□□□□□ -0.7
TRR1YDR353W SSN2P38931 1420 aa10.53□□□□□ -0.72
TRR1YDR353W MON2P48563 1636 aaPredicted RBP10.51□□□□□ -0.73
TRR1YDR353W RIM101P33400 625 aa10.46□□□□□ -0.73
TRR1YDR353W TCB3Q03640 1545 aaKnown RBP10.46□□□□□ -0.74
TRR1YDR353W YKR023WP36119 530 aaKnown RBP10.38□□□□□ -0.75
TRR1YDR353W TY1B-DR4Q07793 1604 aa10.36□□□□□ -0.75
TRR1YDR353W RQC2Q12532 1038 aaKnown RBP10.31□□□□□ -0.76
TRR1YDR353W CDC27P38042 758 aa10.22□□□□□ -0.77
TRR1YDR353W TFC8Q12308 588 aa10.18□□□□□ -0.78
TRR1YDR353W HSL1P34244 1518 aa10.17□□□□□ -0.78
TRR1YDR353W NOP2P40991 618 aaKnown RBP10.15□□□□□ -0.78
TRR1YDR353W HOP09932 586 aa10.13□□□□□ -0.79
TRR1YDR353W OXP1P28273 1286 aa10.1□□□□□ -0.79
TRR1YDR353W SPT6P23615 1451 aaKnown RBP10.1□□□□□ -0.79
TRR1YDR353W YGL015CP33199 130 aa10.04□□□□□ -0.8
TRR1YDR353W DCD1P06773 312 aa10.03□□□□□ -0.8
TRR1YDR353W DNA2P38859 1522 aa10.02□□□□□ -0.81
TRR1YDR353W SKI3P17883 1432 aaKnown RBP10.01□□□□□ -0.81
TRR1YDR353W HIR3P47171 1648 aa10□□□□□ -0.81
TRR1YDR353W SWR1Q05471 1514 aa9.97□□□□□ -0.81
TRR1YDR353W YIL055CP40523 627 aaKnown RBP9.96□□□□□ -0.82
TRR1YDR353W UBP10P53874 792 aaPredicted RBP9.92□□□□□ -0.82
TRR1YDR353W PTP3P40048 928 aa9.91□□□□□ -0.82
TRR1YDR353W XRN1P22147 1528 aaKnown RBP9.91□□□□□ -0.82
TRR1YDR353W YAH1Q12184 172 aaKnown RBP9.87□□□□□ -0.83
TRR1YDR353W KOG1P38873 1557 aa9.85□□□□□ -0.83
TRR1YDR353W BCH2P36122 765 aa9.85□□□□□ -0.83
TRR1YDR353W SSP1P38871 571 aa9.85□□□□□ -0.83
TRR1YDR353W SIN3P22579 1536 aa9.85□□□□□ -0.83
TRR1YDR353W THO2P53552 1597 aaKnown RBP9.84□□□□□ -0.83
TRR1YDR353W REV3P14284 1504 aa9.84□□□□□ -0.83
TRR1YDR353W MAP2P38174 421 aaKnown RBP9.83□□□□□ -0.84
TRR1YDR353W RSM7P47150 247 aa9.83□□□□□ -0.84
TRR1YDR353W SSK2P53599 1579 aa9.77□□□□□ -0.85
TRR1YDR353W SCY1P53009 804 aa9.76□□□□□ -0.85
TRR1YDR353W YLR271WQ06152 274 aa9.76□□□□□ -0.85
TRR1YDR353W CAB3P36076 571 aa9.75□□□□□ -0.85
TRR1YDR353W ARP8Q12386 881 aaKnown RBP RIP-Chip data9.75□□□□□ -0.85not detected
TRR1YDR353W EBP2P36049 427 aaKnown RBP9.72□□□□□ -0.85
TRR1YDR353W NSR1P27476 414 aaKnown RBP RIP-Chip data9.69□□□□□ -0.86not detected
TRR1YDR353W ESP1Q03018 1630 aa9.69□□□□□ -0.86
TRR1YDR353W MYO2P19524 1574 aaKnown RBP9.68□□□□□ -0.86
TRR1YDR353W EPS1P40557 701 aa9.68□□□□□ -0.86
TRR1YDR353W AI2P03876 854 aa9.67□□□□□ -0.86
TRR1YDR353W CHD1P32657 1468 aa9.66□□□□□ -0.86
TRR1YDR353W BBC1P47068 1157 aa9.66□□□□□ -0.86
TRR1YDR353W SLX5P32828 619 aaKnown RBP9.62□□□□□ -0.87
TRR1YDR353W BDF1P35817 686 aa9.6□□□□□ -0.87
TRR1YDR353W TAF2P23255 1407 aa9.58□□□□□ -0.88
TRR1YDR353W PSD2P53037 1138 aaKnown RBP9.57□□□□□ -0.88
TRR1YDR353W MMS22Q06164 1454 aa9.57□□□□□ -0.88
TRR1YDR353W ATG2P53855 1592 aa9.56□□□□□ -0.88
TRR1YDR353W MGA2P40578 1113 aa9.54□□□□□ -0.88
TRR1YDR353W POL1P13382 1468 aa9.53□□□□□ -0.88
TRR1YDR353W BUD31P25337 157 aaPredicted RBP9.52□□□□□ -0.89
TRR1YDR353W BUD4P47136 1447 aa9.52□□□□□ -0.89
TRR1YDR353W TIF4632P39936 914 aaKnown RBP9.5□□□□□ -0.89
TRR1YDR353W YPK9Q12697 1472 aa9.5□□□□□ -0.89
TRR1YDR353W STU1P38198 1513 aa9.5□□□□□ -0.89
TRR1YDR353W TGL3P40308 642 aa9.44□□□□□ -0.9
TRR1YDR353W CST9Q06032 482 aa9.44□□□□□ -0.9
TRR1YDR353W PEP1P32319 1579 aa9.42□□□□□ -0.9
TRR1YDR353W ECM5Q03214 1411 aa9.4□□□□□ -0.9
TRR1YDR353W YTA7P40340 1379 aa9.39□□□□□ -0.91
TRR1YDR353W RKR1Q04781 1562 aa9.39□□□□□ -0.91
TRR1YDR353W SIS2P36024 562 aa9.38□□□□□ -0.91
TRR1YDR353W URN1Q06525 465 aaKnown RBP9.38□□□□□ -0.91
TRR1YDR353W SCC2Q04002 1493 aa9.38□□□□□ -0.91
TRR1YDR353W BPT1P14772 1559 aa9.37□□□□□ -0.91
TRR1YDR353W YOR1P53049 1477 aa9.36□□□□□ -0.91
TRR1YDR353W MDS3P53094 1487 aa9.36□□□□□ -0.91
TRR1YDR353W MYO4P32492 1471 aa9.34□□□□□ -0.91
TRR1YDR353W MRM1P25270 412 aa9.34□□□□□ -0.91
TRR1YDR353W RPO31P04051 1460 aa9.34□□□□□ -0.91
TRR1YDR353W ENP1P38333 483 aaKnown RBP9.32□□□□□ -0.92
TRR1YDR353W TY2B-LR1P0C2J3 1770 aa9.3□□□□□ -0.92
Retrieved 100 of 5,963 RNA–protein pairs in 9.9 ms