RNA–Protein interactions for RNA: YDR310C

SUM1, Transcript of Transcriptional repressor that regulates middle-sporulation genes, yeastyeast

Gene SUM1, Length 3,189 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SUM1YDR310C DRS1P32892 752 aaKnown RBP9.42□□□□□ -0.9
SUM1YDR310C TFA1P36100 482 aa9.18□□□□□ -0.94
SUM1YDR310C RQC2Q12532 1038 aaKnown RBP8.96□□□□□ -0.97
SUM1YDR310C TAF7Q05021 590 aa8.62□□□□□ -1.03
SUM1YDR310C BFR2Q06631 534 aaKnown RBP8.58□□□□□ -1.04
SUM1YDR310C MTC1P47018 478 aaKnown RBP8.4□□□□□ -1.07
SUM1YDR310C AVT3P36062 692 aa8.22□□□□□ -1.09
SUM1YDR310C DMA1P38823 416 aa7.9□□□□□ -1.14
SUM1YDR310C LEO1P38439 464 aa7.88□□□□□ -1.15
SUM1YDR310C DIP2Q12220 943 aaPredicted RBP7.71□□□□□ -1.17
SUM1YDR310C ABP1P15891 592 aaKnown RBP7.67□□□□□ -1.18
SUM1YDR310C IFH1P39520 1085 aa7.57□□□□□ -1.2
SUM1YDR310C INO80P53115 1489 aa7.53□□□□□ -1.2
SUM1YDR310C IOC4Q04213 475 aa7.48□□□□□ -1.21
SUM1YDR310C ORC1P54784 914 aaPredicted RBP7.47□□□□□ -1.21
SUM1YDR310C LEU3P08638 886 aa7.42□□□□□ -1.22
SUM1YDR310C SAS10Q12136 610 aaPredicted RBP7.4□□□□□ -1.23
SUM1YDR310C SPA2P23201 1466 aaKnown RBP7.39□□□□□ -1.23
SUM1YDR310C NAP1P25293 417 aaKnown RBP7.38□□□□□ -1.23
SUM1YDR310C URN1Q06525 465 aaKnown RBP7.31□□□□□ -1.24
SUM1YDR310C TY1B-DR4Q07793 1604 aa7.29□□□□□ -1.24
SUM1YDR310C DMA2P53924 522 aa7.25□□□□□ -1.25
SUM1YDR310C TCB3Q03640 1545 aaKnown RBP7.23□□□□□ -1.25
SUM1YDR310C SGS1P35187 1447 aa7.1□□□□□ -1.27
SUM1YDR310C MON2P48563 1636 aaPredicted RBP7.04□□□□□ -1.28
SUM1YDR310C RLF2Q12495 606 aa7.04□□□□□ -1.28
SUM1YDR310C NOP8Q08287 484 aaPredicted RBP7.02□□□□□ -1.29
SUM1YDR310C PTP3P40048 928 aa7.01□□□□□ -1.29
SUM1YDR310C SIN3P22579 1536 aa6.99□□□□□ -1.29
SUM1YDR310C ATG36P46983 293 aa6.98□□□□□ -1.29
SUM1YDR310C SSN2P38931 1420 aa6.96□□□□□ -1.3
SUM1YDR310C RPN1P38764 993 aaKnown RBP6.93□□□□□ -1.3
SUM1YDR310C HSL1P34244 1518 aa6.88□□□□□ -1.31
SUM1YDR310C SPT6P23615 1451 aaKnown RBP6.87□□□□□ -1.31
SUM1YDR310C YML020WQ03722 664 aa6.85□□□□□ -1.31
SUM1YDR310C CKB1P43639 278 aa6.85□□□□□ -1.31
SUM1YDR310C SNU71P53207 620 aaKnown RBP6.85□□□□□ -1.31
SUM1YDR310C RIM101P33400 625 aa6.85□□□□□ -1.31
SUM1YDR310C AIM44Q99299 758 aa6.85□□□□□ -1.31
SUM1YDR310C SSP1P38871 571 aa6.84□□□□□ -1.31
SUM1YDR310C TOP1P04786 769 aa6.83□□□□□ -1.32
SUM1YDR310C THO2P53552 1597 aaKnown RBP6.83□□□□□ -1.32
SUM1YDR310C CHD1P32657 1468 aa6.83□□□□□ -1.32
SUM1YDR310C SWE1P32944 819 aa6.82□□□□□ -1.32
SUM1YDR310C RSE1Q04693 1361 aaKnown RBP6.81□□□□□ -1.32
SUM1YDR310C XRN1P22147 1528 aaKnown RBP6.81□□□□□ -1.32
SUM1YDR310C SPT21P35209 758 aa6.79□□□□□ -1.32
SUM1YDR310C LAM6Q08001 693 aa6.78□□□□□ -1.32
SUM1YDR310C SSK2P53599 1579 aa6.77□□□□□ -1.33
SUM1YDR310C SWR1Q05471 1514 aa6.77□□□□□ -1.33
SUM1YDR310C YRB30P53107 440 aaPredicted RBP6.75□□□□□ -1.33
SUM1YDR310C HIR3P47171 1648 aa6.74□□□□□ -1.33
SUM1YDR310C OXP1P28273 1286 aa6.74□□□□□ -1.33
SUM1YDR310C MRX12P47084 519 aa6.74□□□□□ -1.33
SUM1YDR310C MAM3Q12296 706 aa6.73□□□□□ -1.33
SUM1YDR310C PAM1P37304 830 aaKnown RBP6.71□□□□□ -1.34
SUM1YDR310C KRI1P42846 591 aaKnown RBP6.7□□□□□ -1.34
SUM1YDR310C YFR016CP43597 1233 aaKnown RBP6.7□□□□□ -1.34
SUM1YDR310C TPO2P53283 614 aa6.7□□□□□ -1.34
SUM1YDR310C FAR11P53917 953 aa6.7□□□□□ -1.34
SUM1YDR310C YLR271WQ06152 274 aa6.69□□□□□ -1.34
SUM1YDR310C YPR148CQ06523 435 aa6.69□□□□□ -1.34
SUM1YDR310C MYO2P19524 1574 aaKnown RBP6.67□□□□□ -1.34
SUM1YDR310C SKI3P17883 1432 aaKnown RBP6.67□□□□□ -1.34
SUM1YDR310C SLX8P40072 274 aa6.64□□□□□ -1.35
SUM1YDR310C ESP1Q03018 1630 aa6.64□□□□□ -1.35
SUM1YDR310C DOS2P54858 310 aa6.63□□□□□ -1.35
SUM1YDR310C SPC42P36094 363 aa6.62□□□□□ -1.35
SUM1YDR310C JSN1P47135 1091 aaKnown RBP RIP-Chip data6.62□□□□□ -1.35not detected
SUM1YDR310C REV3P14284 1504 aa6.62□□□□□ -1.35
SUM1YDR310C OCA5P38738 679 aa6.6□□□□□ -1.35
SUM1YDR310C SUB2Q07478 446 aaKnown RBP6.6□□□□□ -1.35
SUM1YDR310C CWC22P53333 577 aaKnown RBP6.59□□□□□ -1.35
SUM1YDR310C DSF2P38213 736 aa6.58□□□□□ -1.36
SUM1YDR310C MDG1P53885 366 aa6.58□□□□□ -1.36
SUM1YDR310C SEN54Q02825 467 aaPredicted RBP6.58□□□□□ -1.36
SUM1YDR310C ATG2P53855 1592 aa6.57□□□□□ -1.36
SUM1YDR310C KIN1P13185 1064 aa6.56□□□□□ -1.36
SUM1YDR310C NUG1P40010 520 aaKnown RBP6.56□□□□□ -1.36
SUM1YDR310C CST9Q06032 482 aa6.56□□□□□ -1.36
SUM1YDR310C GEF1P37020 779 aa6.55□□□□□ -1.36
SUM1YDR310C GUA1P38625 525 aaKnown RBP6.55□□□□□ -1.36
SUM1YDR310C YTA7P40340 1379 aa6.54□□□□□ -1.36
SUM1YDR310C GIN4Q12263 1142 aa6.54□□□□□ -1.36
SUM1YDR310C KOG1P38873 1557 aa6.54□□□□□ -1.36
SUM1YDR310C PEP1P32319 1579 aa6.53□□□□□ -1.36
SUM1YDR310C BRL1P38770 471 aa6.51□□□□□ -1.37
SUM1YDR310C SSF1P38789 453 aaPredicted RBP6.51□□□□□ -1.37
SUM1YDR310C YPK9Q12697 1472 aa6.51□□□□□ -1.37
SUM1YDR310C ISW1P38144 1129 aa6.51□□□□□ -1.37
SUM1YDR310C RPL17AP05740 184 aaKnown RBP6.5□□□□□ -1.37
SUM1YDR310C SSA1P10591 642 aaKnown RBP6.5□□□□□ -1.37
SUM1YDR310C MGA2P40578 1113 aa6.5□□□□□ -1.37
SUM1YDR310C RPL17BP46990 184 aaKnown RBP6.5□□□□□ -1.37
SUM1YDR310C RLP24Q07915 199 aaKnown RBP6.49□□□□□ -1.37
SUM1YDR310C ECM5Q03214 1411 aa6.49□□□□□ -1.37
SUM1YDR310C POL1P13382 1468 aa6.48□□□□□ -1.37
SUM1YDR310C RAM2P29703 316 aa6.47□□□□□ -1.37
SUM1YDR310C GLN1P32288 370 aaKnown RBP6.47□□□□□ -1.37
SUM1YDR310C YNR021WP53723 404 aaKnown RBP6.47□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms