RNA–Protein interactions for RNA: YDR047W

HEM12, Transcript of Uroporphyrinogen decarboxylase, yeastyeast

Gene HEM12, Length 1,089 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HEM12YDR047W SGS1P35187 1447 aa19.6■□□□□ 0.73
HEM12YDR047W INO80P53115 1489 aa19.28■□□□□ 0.68
HEM12YDR047W TCB3Q03640 1545 aaKnown RBP19.04■□□□□ 0.64
HEM12YDR047W MON2P48563 1636 aaPredicted RBP18.78■□□□□ 0.6
HEM12YDR047W TY1B-DR4Q07793 1604 aa18.74■□□□□ 0.59
HEM12YDR047W SPA2P23201 1466 aaKnown RBP18.71■□□□□ 0.59
HEM12YDR047W SSN2P38931 1420 aa18.66■□□□□ 0.58
HEM12YDR047W HSL1P34244 1518 aa18.41■□□□□ 0.54
HEM12YDR047W SWR1Q05471 1514 aa18.39■□□□□ 0.54
HEM12YDR047W SPT6P23615 1451 aaKnown RBP18.36■□□□□ 0.53
HEM12YDR047W DRS1P32892 752 aaKnown RBP18.11■□□□□ 0.49
HEM12YDR047W HIR3P47171 1648 aa18.06■□□□□ 0.48
HEM12YDR047W XRN1P22147 1528 aaKnown RBP17.94■□□□□ 0.46
HEM12YDR047W DNA2P38859 1522 aa17.88■□□□□ 0.45
HEM12YDR047W KOG1P38873 1557 aa17.82■□□□□ 0.44
HEM12YDR047W REV3P14284 1504 aa17.69■□□□□ 0.42
HEM12YDR047W SIN3P22579 1536 aa17.57■□□□□ 0.4
HEM12YDR047W BUD4P47136 1447 aa17.51■□□□□ 0.39
HEM12YDR047W THO2P53552 1597 aaKnown RBP17.51■□□□□ 0.39
HEM12YDR047W TAF2P23255 1407 aa17.45■□□□□ 0.38
HEM12YDR047W ECM5Q03214 1411 aa17.45■□□□□ 0.38
HEM12YDR047W SSK2P53599 1579 aa17.45■□□□□ 0.38
HEM12YDR047W ATG2P53855 1592 aa17.27■□□□□ 0.35
HEM12YDR047W ESP1Q03018 1630 aa17.26■□□□□ 0.35
HEM12YDR047W MYO2P19524 1574 aaKnown RBP17.23■□□□□ 0.35
HEM12YDR047W SKI3P17883 1432 aaKnown RBP17.21■□□□□ 0.34
HEM12YDR047W MDS3P53094 1487 aa17.19■□□□□ 0.34
HEM12YDR047W PEP1P32319 1579 aa17.15■□□□□ 0.34
HEM12YDR047W YPK9Q12697 1472 aa17.1■□□□□ 0.33
HEM12YDR047W POL1P13382 1468 aa16.98■□□□□ 0.31
HEM12YDR047W SCC2Q04002 1493 aa16.93■□□□□ 0.3
HEM12YDR047W STU1P38198 1513 aa16.87■□□□□ 0.29
HEM12YDR047W RPO31P04051 1460 aa16.86■□□□□ 0.29
HEM12YDR047W UFD4P33202 1483 aa16.81■□□□□ 0.28
HEM12YDR047W CHD1P32657 1468 aa16.79■□□□□ 0.28
HEM12YDR047W YTA7P40340 1379 aa16.77■□□□□ 0.28
HEM12YDR047W RKR1Q04781 1562 aa16.77■□□□□ 0.27
HEM12YDR047W TOP2P06786 1428 aaKnown RBP16.75■□□□□ 0.27
HEM12YDR047W YOR1P53049 1477 aa16.74■□□□□ 0.27
HEM12YDR047W YCF1P39109 1515 aaKnown RBP16.7■□□□□ 0.26
HEM12YDR047W MMS22Q06164 1454 aa16.7■□□□□ 0.26
HEM12YDR047W SMC4Q12267 1418 aa16.66■□□□□ 0.26
HEM12YDR047W BPT1P14772 1559 aa16.63■□□□□ 0.25
HEM12YDR047W MYO4P32492 1471 aa16.59■□□□□ 0.25
HEM12YDR047W RSE1Q04693 1361 aaKnown RBP16.56■□□□□ 0.24
HEM12YDR047W TY2B-LR1P0C2J3 1770 aa16.54■□□□□ 0.24
HEM12YDR047W TY2B-FP0CX63 1770 aa16.54■□□□□ 0.24
HEM12YDR047W TY2B-GR2P0CX64 1770 aa16.54■□□□□ 0.24
HEM12YDR047W TY2B-CP25384 1770 aa16.54■□□□□ 0.24
HEM12YDR047W TY2B-DR2Q03494 1770 aa16.54■□□□□ 0.24
HEM12YDR047W TY1B-DR1Q03855 1755 aa16.54■□□□□ 0.24
HEM12YDR047W TY2B-DR3Q07791 1770 aaKnown RBP16.54■□□□□ 0.24
HEM12YDR047W TY2B-OR1Q12113 1770 aa16.54■□□□□ 0.24
HEM12YDR047W TY2B-DR1Q12472 1770 aa16.54■□□□□ 0.24
HEM12YDR047W TY2B-OR2Q12501 1770 aa16.54■□□□□ 0.24
HEM12YDR047W TY1B-DR3Q99231 1755 aa16.44■□□□□ 0.22
HEM12YDR047W SAS10Q12136 610 aaPredicted RBP16.44■□□□□ 0.22
HEM12YDR047W TY2B-BQ12491 1770 aa16.38■□□□□ 0.21
HEM12YDR047W SPP41P38904 1435 aa16.37■□□□□ 0.21
HEM12YDR047W RQC2Q12532 1038 aaKnown RBP16.37■□□□□ 0.21
HEM12YDR047W CDC25P04821 1589 aa16.34■□□□□ 0.21
HEM12YDR047W TAF7Q05021 590 aa16.33■□□□□ 0.2
HEM12YDR047W SNQ2P32568 1501 aaKnown RBP16.33■□□□□ 0.2
HEM12YDR047W TY1B-BRQ12193 1756 aa16.31■□□□□ 0.2
HEM12YDR047W TY1B-GR3Q12316 1755 aa16.31■□□□□ 0.2
HEM12YDR047W TY1B-ORQ92393 1755 aa16.31■□□□□ 0.2
HEM12YDR047W STH1P32597 1359 aa16.3■□□□□ 0.2
HEM12YDR047W PAN1P32521 1480 aa16.29■□□□□ 0.2
HEM12YDR047W TY1B-HO13535 1793 aa16.29■□□□□ 0.2
HEM12YDR047W TY1B-DR5P0C2I2 1755 aa16.29■□□□□ 0.2
HEM12YDR047W TY1B-DR6P0C2I3 1755 aa16.29■□□□□ 0.2
HEM12YDR047W TY1B-LR2P0C2I5 1755 aa16.29■□□□□ 0.2
HEM12YDR047W TY1B-LR3P0C2I6 1755 aaKnown RBP16.29■□□□□ 0.2
HEM12YDR047W TY1B-PR1P0C2I9 1755 aaKnown RBP16.29■□□□□ 0.2
HEM12YDR047W TY1B-PR2P0C2J0 1756 aa16.29■□□□□ 0.2
HEM12YDR047W TY1B-PR3P0C2J1 1755 aaKnown RBP16.29■□□□□ 0.2
HEM12YDR047W TY1B-JR1P47098 1755 aa16.29■□□□□ 0.2
HEM12YDR047W TY1B-ML2Q03434 1755 aaKnown RBP16.29■□□□□ 0.2
HEM12YDR047W TY1B-ER1Q03612 1755 aa16.29■□□□□ 0.2
HEM12YDR047W TY1B-ML1Q04711 1755 aaKnown RBP16.29■□□□□ 0.2
HEM12YDR047W TY1B-GR2Q12269 1755 aa16.29■□□□□ 0.2
HEM12YDR047W TY1B-OLQ12273 1755 aa16.29■□□□□ 0.2
HEM12YDR047W TY1B-PLQ12414 1755 aaKnown RBP16.29■□□□□ 0.2
HEM12YDR047W MTC1P47018 478 aaKnown RBP16.25■□□□□ 0.19
HEM12YDR047W TSC11P40061 1430 aa16.25■□□□□ 0.19
HEM12YDR047W VTH1P40438 1549 aa16.21■□□□□ 0.19
HEM12YDR047W VTH2P40890 1549 aa16.21■□□□□ 0.19
HEM12YDR047W TRM732Q03496 1420 aa16.12■□□□□ 0.17
HEM12YDR047W PDR15Q04182 1529 aaKnown RBP16.12■□□□□ 0.17
HEM12YDR047W MLP2P40457 1679 aa16.11■□□□□ 0.17
HEM12YDR047W DNF1P32660 1571 aa16.09■□□□□ 0.17
HEM12YDR047W SNT2P53127 1403 aa16.08■□□□□ 0.16
HEM12YDR047W ESC1Q03661 1658 aaKnown RBP16.07■□□□□ 0.16
HEM12YDR047W ULS1Q08562 1619 aa16.05■□□□□ 0.16
HEM12YDR047W IFH1P39520 1085 aa16.03■□□□□ 0.16
HEM12YDR047W GEA1P47102 1408 aaPredicted RBP16.02■□□□□ 0.16
HEM12YDR047W TY1B-JR2P47100 1755 aaKnown RBP16.02■□□□□ 0.15
HEM12YDR047W TY1B-ER2Q03619 1755 aa16.02■□□□□ 0.15
HEM12YDR047W TY1B-MR1Q04214 1755 aa16.02■□□□□ 0.15
HEM12YDR047W TY1B-MR2Q04670 1755 aaKnown RBP16.02■□□□□ 0.15
Retrieved 100 of 5,963 RNA–protein pairs in 15.1 ms