RNA–Protein interactions for RNA: YDL204W

RTN2, Transcript of Reticulon protein, yeastyeast

Gene RTN2, Length 1,182 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTN2YDL204W SGS1P35187 1447 aa17.64■□□□□ 0.42
RTN2YDL204W INO80P53115 1489 aa17.39■□□□□ 0.37
RTN2YDL204W SPA2P23201 1466 aaKnown RBP17.11■□□□□ 0.33
RTN2YDL204W TCB3Q03640 1545 aaKnown RBP17.1■□□□□ 0.33
RTN2YDL204W SSN2P38931 1420 aa16.94■□□□□ 0.3
RTN2YDL204W TY1B-DR4Q07793 1604 aa16.86■□□□□ 0.29
RTN2YDL204W MON2P48563 1636 aaPredicted RBP16.67■□□□□ 0.26
RTN2YDL204W HSL1P34244 1518 aa16.59■□□□□ 0.25
RTN2YDL204W SPT6P23615 1451 aaKnown RBP16.53■□□□□ 0.24
RTN2YDL204W DRS1P32892 752 aaKnown RBP16.41■□□□□ 0.22
RTN2YDL204W SWR1Q05471 1514 aa16.4■□□□□ 0.22
RTN2YDL204W HIR3P47171 1648 aa16.28■□□□□ 0.2
RTN2YDL204W XRN1P22147 1528 aaKnown RBP16.17■□□□□ 0.18
RTN2YDL204W REV3P14284 1504 aa16.01■□□□□ 0.15
RTN2YDL204W THO2P53552 1597 aaKnown RBP15.96■□□□□ 0.15
RTN2YDL204W SIN3P22579 1536 aa15.94■□□□□ 0.14
RTN2YDL204W KOG1P38873 1557 aa15.89■□□□□ 0.13
RTN2YDL204W SSK2P53599 1579 aa15.84■□□□□ 0.13
RTN2YDL204W DNA2P38859 1522 aa15.82■□□□□ 0.12
RTN2YDL204W MYO2P19524 1574 aaKnown RBP15.72■□□□□ 0.11
RTN2YDL204W TAF2P23255 1407 aa15.7■□□□□ 0.1
RTN2YDL204W ESP1Q03018 1630 aa15.69■□□□□ 0.1
RTN2YDL204W BUD4P47136 1447 aa15.68■□□□□ 0.1
RTN2YDL204W ATG2P53855 1592 aa15.57■□□□□ 0.08
RTN2YDL204W ECM5Q03214 1411 aa15.51■□□□□ 0.07
RTN2YDL204W SKI3P17883 1432 aaKnown RBP15.47■□□□□ 0.07
RTN2YDL204W YPK9Q12697 1472 aa15.42■□□□□ 0.06
RTN2YDL204W MDS3P53094 1487 aa15.41■□□□□ 0.06
RTN2YDL204W POL1P13382 1468 aa15.4■□□□□ 0.06
RTN2YDL204W CHD1P32657 1468 aa15.38■□□□□ 0.05
RTN2YDL204W PEP1P32319 1579 aa15.36■□□□□ 0.05
RTN2YDL204W MMS22Q06164 1454 aa15.33■□□□□ 0.04
RTN2YDL204W STU1P38198 1513 aa15.33■□□□□ 0.04
RTN2YDL204W SCC2Q04002 1493 aa15.26■□□□□ 0.03
RTN2YDL204W RKR1Q04781 1562 aa15.25■□□□□ 0.03
RTN2YDL204W YTA7P40340 1379 aa15.21■□□□□ 0.02
RTN2YDL204W RPO31P04051 1460 aa15.16■□□□□ 0.02
RTN2YDL204W YOR1P53049 1477 aa15.16■□□□□ 0.02
RTN2YDL204W BPT1P14772 1559 aa15.13■□□□□ 0.01
RTN2YDL204W MYO4P32492 1471 aa15.1■□□□□ 0.01
RTN2YDL204W UFD4P33202 1483 aa15.09■□□□□ 0.01
RTN2YDL204W TOP2P06786 1428 aaKnown RBP15.09■□□□□ 0.01
RTN2YDL204W SMC4Q12267 1418 aa15.06■□□□□ 0
RTN2YDL204W YCF1P39109 1515 aaKnown RBP15.06■□□□□ 0
RTN2YDL204W TY2B-LR1P0C2J3 1770 aa15.02□□□□□ -0.01
RTN2YDL204W TY2B-FP0CX63 1770 aa15.02□□□□□ -0.01
RTN2YDL204W TY2B-GR2P0CX64 1770 aa15.02□□□□□ -0.01
RTN2YDL204W TY2B-CP25384 1770 aa15.02□□□□□ -0.01
RTN2YDL204W TY2B-DR2Q03494 1770 aa15.02□□□□□ -0.01
RTN2YDL204W TY1B-DR1Q03855 1755 aa15.02□□□□□ -0.01
RTN2YDL204W TY2B-DR3Q07791 1770 aaKnown RBP15.02□□□□□ -0.01
RTN2YDL204W TY2B-OR1Q12113 1770 aa15.02□□□□□ -0.01
RTN2YDL204W TY2B-DR1Q12472 1770 aa15.02□□□□□ -0.01
RTN2YDL204W TY2B-OR2Q12501 1770 aa15.02□□□□□ -0.01
RTN2YDL204W TY1B-DR3Q99231 1755 aa14.96□□□□□ -0.02
RTN2YDL204W SAS10Q12136 610 aaPredicted RBP14.95□□□□□ -0.02
RTN2YDL204W TY2B-BQ12491 1770 aa14.89□□□□□ -0.03
RTN2YDL204W SNQ2P32568 1501 aaKnown RBP14.86□□□□□ -0.03
RTN2YDL204W MLP2P40457 1679 aa14.83□□□□□ -0.04
RTN2YDL204W TAF7Q05021 590 aa14.81□□□□□ -0.04
RTN2YDL204W TY1B-HO13535 1793 aa14.78□□□□□ -0.04
RTN2YDL204W TY1B-DR5P0C2I2 1755 aa14.78□□□□□ -0.04
RTN2YDL204W TY1B-DR6P0C2I3 1755 aa14.78□□□□□ -0.04
RTN2YDL204W TY1B-LR2P0C2I5 1755 aa14.78□□□□□ -0.04
RTN2YDL204W TY1B-LR3P0C2I6 1755 aaKnown RBP14.78□□□□□ -0.04
RTN2YDL204W TY1B-PR1P0C2I9 1755 aaKnown RBP14.78□□□□□ -0.04
RTN2YDL204W TY1B-PR2P0C2J0 1756 aa14.78□□□□□ -0.04
RTN2YDL204W TY1B-PR3P0C2J1 1755 aaKnown RBP14.78□□□□□ -0.04
RTN2YDL204W TY1B-JR1P47098 1755 aa14.78□□□□□ -0.04
RTN2YDL204W TY1B-ML2Q03434 1755 aaKnown RBP14.78□□□□□ -0.04
RTN2YDL204W TY1B-ER1Q03612 1755 aa14.78□□□□□ -0.04
RTN2YDL204W TY1B-ML1Q04711 1755 aaKnown RBP14.78□□□□□ -0.04
RTN2YDL204W TY1B-GR2Q12269 1755 aa14.78□□□□□ -0.04
RTN2YDL204W TY1B-OLQ12273 1755 aa14.78□□□□□ -0.04
RTN2YDL204W TY1B-PLQ12414 1755 aaKnown RBP14.78□□□□□ -0.04
RTN2YDL204W STH1P32597 1359 aa14.78□□□□□ -0.04
RTN2YDL204W TY1B-BRQ12193 1756 aa14.77□□□□□ -0.05
RTN2YDL204W TY1B-GR3Q12316 1755 aa14.77□□□□□ -0.05
RTN2YDL204W TY1B-ORQ92393 1755 aa14.77□□□□□ -0.05
RTN2YDL204W SPP41P38904 1435 aa14.75□□□□□ -0.05
RTN2YDL204W CDC25P04821 1589 aa14.73□□□□□ -0.05
RTN2YDL204W TRM732Q03496 1420 aa14.73□□□□□ -0.05
RTN2YDL204W PDR15Q04182 1529 aaKnown RBP14.71□□□□□ -0.05
RTN2YDL204W RQC2Q12532 1038 aaKnown RBP14.71□□□□□ -0.05
RTN2YDL204W VTH1P40438 1549 aa14.68□□□□□ -0.06
RTN2YDL204W VTH2P40890 1549 aa14.68□□□□□ -0.06
RTN2YDL204W ULS1Q08562 1619 aa14.66□□□□□ -0.06
RTN2YDL204W TSC11P40061 1430 aa14.64□□□□□ -0.07
RTN2YDL204W PAN1P32521 1480 aa14.63□□□□□ -0.07
RTN2YDL204W ESC1Q03661 1658 aaKnown RBP14.61□□□□□ -0.07
RTN2YDL204W IKI3Q06706 1349 aaKnown RBP14.61□□□□□ -0.07
RTN2YDL204W RSE1Q04693 1361 aaKnown RBP14.59□□□□□ -0.07
RTN2YDL204W GEA1P47102 1408 aaPredicted RBP14.58□□□□□ -0.07
RTN2YDL204W TY1B-JR2P47100 1755 aaKnown RBP14.55□□□□□ -0.08
RTN2YDL204W TY1B-ER2Q03619 1755 aa14.55□□□□□ -0.08
RTN2YDL204W TY1B-MR1Q04214 1755 aa14.55□□□□□ -0.08
RTN2YDL204W TY1B-MR2Q04670 1755 aaKnown RBP14.55□□□□□ -0.08
RTN2YDL204W TY1B-LR1Q12088 1755 aaKnown RBP14.55□□□□□ -0.08
RTN2YDL204W TY1B-NL1Q12112 1755 aa14.55□□□□□ -0.08
RTN2YDL204W TY1B-GR1Q12141 1755 aa14.55□□□□□ -0.08
Retrieved 100 of 5,963 RNA–protein pairs in 7.8 ms