RNA–Protein interactions for RNA: YDL097C

RPN6, Transcript of Essential, non-ATPase regulatory subunit of the 26S proteasome lid, yeastyeast

Gene RPN6, Length 1,305 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN6YDL097C MTC1P47018 478 aaKnown RBP11.68□□□□□ -0.54
RPN6YDL097C FAP1P53971 965 aa11.57□□□□□ -0.56
RPN6YDL097C INO80P53115 1489 aa11.42□□□□□ -0.58
RPN6YDL097C MON2P48563 1636 aaPredicted RBP11.36□□□□□ -0.59
RPN6YDL097C RSE1Q04693 1361 aaKnown RBP10.94□□□□□ -0.66
RPN6YDL097C PRY3P47033 881 aa10.89□□□□□ -0.67
RPN6YDL097C DNA2P38859 1522 aa10.84□□□□□ -0.67
RPN6YDL097C KOG1P38873 1557 aa10.57□□□□□ -0.72
RPN6YDL097C SWR1Q05471 1514 aa10.51□□□□□ -0.73
RPN6YDL097C AAD16Q02895 342 aa10.37□□□□□ -0.75
RPN6YDL097C PRI1P10363 409 aa10.32□□□□□ -0.76
RPN6YDL097C SPA2P23201 1466 aaKnown RBP10.27□□□□□ -0.76
RPN6YDL097C YCK3P39962 524 aa10.15□□□□□ -0.78
RPN6YDL097C DRS1P32892 752 aaKnown RBP10.13□□□□□ -0.79
RPN6YDL097C HAA1Q12753 694 aaKnown RBP10.1□□□□□ -0.79
RPN6YDL097C TY1B-DR4Q07793 1604 aa10.03□□□□□ -0.8
RPN6YDL097C TCB3Q03640 1545 aaKnown RBP9.98□□□□□ -0.81
RPN6YDL097C ISW2Q08773 1120 aa9.89□□□□□ -0.83
RPN6YDL097C MIF2P35201 549 aa9.84□□□□□ -0.83
RPN6YDL097C RPG1P38249 964 aaKnown RBP9.83□□□□□ -0.84
RPN6YDL097C TSR3Q12094 313 aaKnown RBP9.76□□□□□ -0.85
RPN6YDL097C ECM5Q03214 1411 aa9.71□□□□□ -0.85
RPN6YDL097C SPT6P23615 1451 aaKnown RBP9.56□□□□□ -0.88
RPN6YDL097C REV3P14284 1504 aa9.54□□□□□ -0.88
RPN6YDL097C HSL1P34244 1518 aa9.53□□□□□ -0.88
RPN6YDL097C BUD4P47136 1447 aa9.51□□□□□ -0.89
RPN6YDL097C MDS3P53094 1487 aa9.5□□□□□ -0.89
RPN6YDL097C THO2P53552 1597 aaKnown RBP9.47□□□□□ -0.89
RPN6YDL097C YFR006WP43590 535 aa9.46□□□□□ -0.9
RPN6YDL097C MRPL32P25348 183 aa9.37□□□□□ -0.91
RPN6YDL097C BPT1P14772 1559 aa9.32□□□□□ -0.92
RPN6YDL097C HIR3P47171 1648 aa9.28□□□□□ -0.92
RPN6YDL097C SGS1P35187 1447 aa9.27□□□□□ -0.93
RPN6YDL097C PEP1P32319 1579 aa9.27□□□□□ -0.93
RPN6YDL097C YGL015CP33199 130 aa9.19□□□□□ -0.94
RPN6YDL097C ABP1P15891 592 aaKnown RBP9.17□□□□□ -0.94
RPN6YDL097C DIP2Q12220 943 aaPredicted RBP9.17□□□□□ -0.94
RPN6YDL097C YCF1P39109 1515 aaKnown RBP9.13□□□□□ -0.95
RPN6YDL097C TAF2P23255 1407 aa9.11□□□□□ -0.95
RPN6YDL097C ATG2P53855 1592 aa9.05□□□□□ -0.96
RPN6YDL097C MYO2P19524 1574 aaKnown RBP9.02□□□□□ -0.97
RPN6YDL097C LTE1P07866 1435 aa9.01□□□□□ -0.97
RPN6YDL097C BNI1P41832 1953 aa9□□□□□ -0.97
RPN6YDL097C XRN1P22147 1528 aaKnown RBP8.99□□□□□ -0.97
RPN6YDL097C MET5P47169 1442 aa8.95□□□□□ -0.98
RPN6YDL097C REB1P21538 810 aa8.94□□□□□ -0.98
RPN6YDL097C ITT1Q04638 464 aa8.94□□□□□ -0.98
RPN6YDL097C CDC25P04821 1589 aa8.93□□□□□ -0.98
RPN6YDL097C RPA190P10964 1664 aaKnown RBP8.91□□□□□ -0.98
RPN6YDL097C RPL17AP05740 184 aaKnown RBP8.88□□□□□ -0.99
RPN6YDL097C RPL17BP46990 184 aaKnown RBP8.88□□□□□ -0.99
RPN6YDL097C SSK2P53599 1579 aa8.88□□□□□ -0.99
RPN6YDL097C SKI3P17883 1432 aaKnown RBP8.88□□□□□ -0.99
RPN6YDL097C MMS1Q06211 1407 aa8.87□□□□□ -0.99
RPN6YDL097C DNF1P32660 1571 aa8.86□□□□□ -0.99
RPN6YDL097C GEA2P39993 1459 aaKnown RBP8.84□□□□□ -0.99
RPN6YDL097C IRC20Q06554 1556 aa8.82□□□□□ -1
RPN6YDL097C ESC1Q03661 1658 aaKnown RBP8.79□□□□□ -1
RPN6YDL097C BUD31P25337 157 aaPredicted RBP8.78□□□□□ -1
RPN6YDL097C RPO31P04051 1460 aa8.76□□□□□ -1.01
RPN6YDL097C UFD4P33202 1483 aa8.74□□□□□ -1.01
RPN6YDL097C CDC27P38042 758 aa8.74□□□□□ -1.01
RPN6YDL097C RKR1Q04781 1562 aa8.72□□□□□ -1.01
RPN6YDL097C CHD1P32657 1468 aa8.69□□□□□ -1.02
RPN6YDL097C RQC2Q12532 1038 aaKnown RBP8.67□□□□□ -1.02
RPN6YDL097C DRS2P39524 1355 aa8.65□□□□□ -1.03
RPN6YDL097C DNF2Q12675 1612 aa8.59□□□□□ -1.03
RPN6YDL097C MAP2P38174 421 aaKnown RBP8.57□□□□□ -1.04
RPN6YDL097C SIN3P22579 1536 aa8.56□□□□□ -1.04
RPN6YDL097C PAN1P32521 1480 aa8.56□□□□□ -1.04
RPN6YDL097C AVT3P36062 692 aa8.55□□□□□ -1.04
RPN6YDL097C UBP10P53874 792 aaPredicted RBP8.55□□□□□ -1.04
RPN6YDL097C YOR093CQ12275 1648 aa8.53□□□□□ -1.04
RPN6YDL097C ESP1Q03018 1630 aa8.52□□□□□ -1.04
RPN6YDL097C SCC2Q04002 1493 aa8.51□□□□□ -1.05
RPN6YDL097C YPK9Q12697 1472 aa8.51□□□□□ -1.05
RPN6YDL097C TY1B-BRQ12193 1756 aa8.5□□□□□ -1.05
RPN6YDL097C TY1B-GR3Q12316 1755 aa8.5□□□□□ -1.05
RPN6YDL097C TY1B-ORQ92393 1755 aa8.5□□□□□ -1.05
RPN6YDL097C YKR023WP36119 530 aaKnown RBP8.5□□□□□ -1.05
RPN6YDL097C VPS15P22219 1454 aa8.45□□□□□ -1.06
RPN6YDL097C TY2B-LR1P0C2J3 1770 aa8.43□□□□□ -1.06
RPN6YDL097C TY2B-FP0CX63 1770 aa8.43□□□□□ -1.06
RPN6YDL097C TY2B-GR2P0CX64 1770 aa8.43□□□□□ -1.06
RPN6YDL097C TY2B-CP25384 1770 aa8.43□□□□□ -1.06
RPN6YDL097C TY2B-DR2Q03494 1770 aa8.43□□□□□ -1.06
RPN6YDL097C TY1B-DR1Q03855 1755 aa8.43□□□□□ -1.06
RPN6YDL097C TY2B-DR3Q07791 1770 aaKnown RBP8.43□□□□□ -1.06
RPN6YDL097C TY2B-OR1Q12113 1770 aa8.43□□□□□ -1.06
RPN6YDL097C TY2B-DR1Q12472 1770 aa8.43□□□□□ -1.06
RPN6YDL097C TY2B-OR2Q12501 1770 aa8.43□□□□□ -1.06
RPN6YDL097C YRF1-1P0CX20 1796 aa8.42□□□□□ -1.06
RPN6YDL097C YRF1-5P0CX21 1796 aa8.42□□□□□ -1.06
RPN6YDL097C YRF1-8P0CX22 1796 aa8.42□□□□□ -1.06
RPN6YDL097C TRM732Q03496 1420 aa8.41□□□□□ -1.06
RPN6YDL097C DCD1P06773 312 aa8.38□□□□□ -1.07
RPN6YDL097C HOP09932 586 aa8.37□□□□□ -1.07
RPN6YDL097C SPT21P35209 758 aa8.37□□□□□ -1.07
RPN6YDL097C NUP159P40477 1460 aa8.35□□□□□ -1.07
RPN6YDL097C SIS1P25294 352 aaKnown RBP8.33□□□□□ -1.08
Retrieved 100 of 5,963 RNA–protein pairs in 11.9 ms