RNA–Protein interactions for RNA: YDL054C

MCH1, Transcript of Protein with similarity to mammalian monocarboxylate permeases, yeast

Gene MCH1, Length 1,461 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MCH1	YDL054C	MTC1	P47018	478 aa	Known RBP	14.81	□□□□□ -0.04
MCH1	YDL054C	DRS1	P32892	752 aa	Known RBP	14.34	□□□□□ -0.11
MCH1	YDL054C	FAP1	P53971	965 aa		13.86	□□□□□ -0.19
MCH1	YDL054C	PRY3	P47033	881 aa		13.04	□□□□□ -0.32
MCH1	YDL054C	AAD16	Q02895	342 aa		12.54	□□□□□ -0.4
MCH1	YDL054C	PRI1	P10363	409 aa		12.5	□□□□□ -0.41
MCH1	YDL054C	DIP2	Q12220	943 aa	Predicted RBP	12.39	□□□□□ -0.43
MCH1	YDL054C	BFR2	Q06631	534 aa	Known RBP	12.17	□□□□□ -0.46
MCH1	YDL054C	YCK3	P39962	524 aa		12.15	□□□□□ -0.46
MCH1	YDL054C	ISW2	Q08773	1120 aa		12.14	□□□□□ -0.47
MCH1	YDL054C	HAA1	Q12753	694 aa	Known RBP	12.13	□□□□□ -0.47
MCH1	YDL054C	AVT3	P36062	692 aa		12.09	□□□□□ -0.47
MCH1	YDL054C	RPG1	P38249	964 aa	Known RBP	12	□□□□□ -0.49
MCH1	YDL054C	TSR3	Q12094	313 aa	Known RBP	11.83	□□□□□ -0.52
MCH1	YDL054C	RSE1	Q04693	1361 aa	Known RBP	11.82	□□□□□ -0.52
MCH1	YDL054C	RPL17A	P05740	184 aa	Known RBP	11.41	□□□□□ -0.58
MCH1	YDL054C	RPL17B	P46990	184 aa	Known RBP	11.41	□□□□□ -0.58
MCH1	YDL054C	MRPL32	P25348	183 aa		11.38	□□□□□ -0.59
MCH1	YDL054C	REB1	P21538	810 aa		11.32	□□□□□ -0.6
MCH1	YDL054C	SGS1	P35187	1447 aa		11.22	□□□□□ -0.61
MCH1	YDL054C	TFA1	P36100	482 aa		11.1	□□□□□ -0.63
MCH1	YDL054C	YGL015C	P33199	130 aa		11.08	□□□□□ -0.64
MCH1	YDL054C	SPT21	P35209	758 aa		10.98	□□□□□ -0.65
MCH1	YDL054C	INO80	P53115	1489 aa		10.93	□□□□□ -0.66
MCH1	YDL054C	TCB3	Q03640	1545 aa	Known RBP	10.87	□□□□□ -0.67
MCH1	YDL054C	MON2	P48563	1636 aa	Predicted RBP	10.84	□□□□□ -0.67
MCH1	YDL054C	YKR023W	P36119	530 aa	Known RBP	10.73	□□□□□ -0.69
MCH1	YDL054C	TY1B-DR4	Q07793	1604 aa		10.72	□□□□□ -0.69
MCH1	YDL054C	RIM101	P33400	625 aa		10.71	□□□□□ -0.69
MCH1	YDL054C	CDC27	P38042	758 aa		10.63	□□□□□ -0.71
MCH1	YDL054C	SWR1	Q05471	1514 aa		10.62	□□□□□ -0.71
MCH1	YDL054C	SSN2	P38931	1420 aa		10.61	□□□□□ -0.71
MCH1	YDL054C	HSL1	P34244	1518 aa		10.54	□□□□□ -0.72
MCH1	YDL054C	SPT6	P23615	1451 aa	Known RBP	10.54	□□□□□ -0.72
MCH1	YDL054C	TFC8	Q12308	588 aa		10.52	□□□□□ -0.73
MCH1	YDL054C	SPA2	P23201	1466 aa	Known RBP	10.51	□□□□□ -0.73
MCH1	YDL054C	HO	P09932	586 aa		10.5	□□□□□ -0.73
MCH1	YDL054C	BUD31	P25337	157 aa	Predicted RBP	10.45	□□□□□ -0.74
MCH1	YDL054C	DCD1	P06773	312 aa		10.44	□□□□□ -0.74
MCH1	YDL054C	MAP2	P38174	421 aa	Known RBP	10.41	□□□□□ -0.74
MCH1	YDL054C	UBP10	P53874	792 aa	Predicted RBP	10.41	□□□□□ -0.74
MCH1	YDL054C	DNA2	P38859	1522 aa		10.41	□□□□□ -0.74
MCH1	YDL054C	OXP1	P28273	1286 aa		10.36	□□□□□ -0.75
MCH1	YDL054C	HIR3	P47171	1648 aa		10.35	□□□□□ -0.75
MCH1	YDL054C	XRN1	P22147	1528 aa	Known RBP	10.29	□□□□□ -0.76
MCH1	YDL054C	KOG1	P38873	1557 aa		10.27	□□□□□ -0.76
MCH1	YDL054C	YIL055C	P40523	627 aa	Known RBP	10.2	□□□□□ -0.78
MCH1	YDL054C	BCH2	P36122	765 aa		10.19	□□□□□ -0.78
MCH1	YDL054C	PTP3	P40048	928 aa		10.17	□□□□□ -0.78
MCH1	YDL054C	SCY1	P53009	804 aa		10.12	□□□□□ -0.79
MCH1	YDL054C	YAH1	Q12184	172 aa	Known RBP	10.12	□□□□□ -0.79
MCH1	YDL054C	ECM5	Q03214	1411 aa		10.11	□□□□□ -0.79
MCH1	YDL054C	REV3	P14284	1504 aa		10.1	□□□□□ -0.79
MCH1	YDL054C	TAF2	P23255	1407 aa		10.09	□□□□□ -0.79
MCH1	YDL054C	BUD4	P47136	1447 aa		10.05	□□□□□ -0.8
MCH1	YDL054C	RSM7	P47150	247 aa		10.05	□□□□□ -0.8
MCH1	YDL054C	TIF4632	P39936	914 aa	Known RBP	10.04	□□□□□ -0.8
MCH1	YDL054C	THO2	P53552	1597 aa	Known RBP	10	□□□□□ -0.81
MCH1	YDL054C	SLX5	P32828	619 aa	Known RBP	9.99	□□□□□ -0.81
MCH1	YDL054C	SSP1	P38871	571 aa		9.99	□□□□□ -0.81
MCH1	YDL054C	YLR271W	Q06152	274 aa		9.99	□□□□□ -0.81
MCH1	YDL054C	EPS1	P40557	701 aa		9.98	□□□□□ -0.81
MCH1	YDL054C	SIN3	P22579	1536 aa		9.97	□□□□□ -0.81
MCH1	YDL054C	SIS1	P25294	352 aa	Known RBP	9.95	□□□□□ -0.82
MCH1	YDL054C	TGL3	P40308	642 aa		9.95	□□□□□ -0.82
MCH1	YDL054C	SKI3	P17883	1432 aa	Known RBP	9.93	□□□□□ -0.82
MCH1	YDL054C	AI2	P03876	854 aa		9.92	□□□□□ -0.82
MCH1	YDL054C	BDF1	P35817	686 aa		9.92	□□□□□ -0.82
MCH1	YDL054C	SSK2	P53599	1579 aa		9.92	□□□□□ -0.82
MCH1	YDL054C	UBP9	P39967	754 aa		9.91	□□□□□ -0.82
MCH1	YDL054C	BBC1	P47068	1157 aa		9.89	□□□□□ -0.83
MCH1	YDL054C	ATG2	P53855	1592 aa		9.88	□□□□□ -0.83
MCH1	YDL054C	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	9.88	□□□□□ -0.83	not detected
MCH1	YDL054C	MDS3	P53094	1487 aa		9.88	□□□□□ -0.83
MCH1	YDL054C	PEP1	P32319	1579 aa		9.84	□□□□□ -0.83
MCH1	YDL054C	ESP1	Q03018	1630 aa		9.83	□□□□□ -0.84
MCH1	YDL054C	PSD2	P53037	1138 aa	Known RBP	9.79	□□□□□ -0.84
MCH1	YDL054C	MYO2	P19524	1574 aa	Known RBP	9.75	□□□□□ -0.85
MCH1	YDL054C	YPK9	Q12697	1472 aa		9.73	□□□□□ -0.85
MCH1	YDL054C	MGA2	P40578	1113 aa		9.7	□□□□□ -0.86
MCH1	YDL054C	SCC2	Q04002	1493 aa		9.68	□□□□□ -0.86
MCH1	YDL054C	CST9	Q06032	482 aa		9.66	□□□□□ -0.86
MCH1	YDL054C	UFD4	P33202	1483 aa		9.66	□□□□□ -0.86
MCH1	YDL054C	POL1	P13382	1468 aa		9.64	□□□□□ -0.87
MCH1	YDL054C	STU1	P38198	1513 aa		9.63	□□□□□ -0.87
MCH1	YDL054C	RPO31	P04051	1460 aa		9.62	□□□□□ -0.87
MCH1	YDL054C	MRM1	P25270	412 aa		9.59	□□□□□ -0.87
MCH1	YDL054C	BPT1	P14772	1559 aa		9.58	□□□□□ -0.88
MCH1	YDL054C	RKR1	Q04781	1562 aa		9.56	□□□□□ -0.88
MCH1	YDL054C	RQC2	Q12532	1038 aa	Known RBP	9.55	□□□□□ -0.88
MCH1	YDL054C	TOP2	P06786	1428 aa	Known RBP	9.54	□□□□□ -0.88
MCH1	YDL054C	YCF1	P39109	1515 aa	Known RBP	9.54	□□□□□ -0.88
MCH1	YDL054C	NSR1	P27476	414 aa	Known RBP RIP-Chip data	9.53	□□□□□ -0.88	not detected
MCH1	YDL054C	YOR1	P53049	1477 aa		9.52	□□□□□ -0.89
MCH1	YDL054C	YTA7	P40340	1379 aa		9.51	□□□□□ -0.89
MCH1	YDL054C	SMC4	Q12267	1418 aa		9.47	□□□□□ -0.89
MCH1	YDL054C	SAS10	Q12136	610 aa	Predicted RBP	9.47	□□□□□ -0.89
MCH1	YDL054C	YBL029C-A	Q3E756	94 aa		9.47	□□□□□ -0.89
MCH1	YDL054C	YAP5	P40574	245 aa		9.46	□□□□□ -0.9
MCH1	YDL054C	TY2B-LR1	P0C2J3	1770 aa		9.44	□□□□□ -0.9

Retrieved 100 of 5,963 RNA–protein pairs in 82.3 ms