RNA–Protein interactions for RNA: YCL048W-A

YCL048W-A, Transcript of Putative protein of unknown function, yeastyeast

Gene YCL048W-A, Length 240 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YCL048W-AYCL048W-A SGS1P35187 1447 aa22.04■■□□□ 1.12
YCL048W-AYCL048W-A INO80P53115 1489 aa21.9■■□□□ 1.1
YCL048W-AYCL048W-A MON2P48563 1636 aaPredicted RBP21.85■■□□□ 1.09
YCL048W-AYCL048W-A TCB3Q03640 1545 aaKnown RBP21.75■■□□□ 1.07
YCL048W-AYCL048W-A TY1B-DR4Q07793 1604 aa21.53■■□□□ 1.04
YCL048W-AYCL048W-A SWR1Q05471 1514 aa21.19■□□□□ 0.98
YCL048W-AYCL048W-A HSL1P34244 1518 aa20.99■□□□□ 0.95
YCL048W-AYCL048W-A SPT6P23615 1451 aaKnown RBP20.92■□□□□ 0.94
YCL048W-AYCL048W-A SPA2P23201 1466 aaKnown RBP20.9■□□□□ 0.94
YCL048W-AYCL048W-A SSN2P38931 1420 aa20.83■□□□□ 0.93
YCL048W-AYCL048W-A DNA2P38859 1522 aa20.7■□□□□ 0.9
YCL048W-AYCL048W-A KOG1P38873 1557 aa20.66■□□□□ 0.9
YCL048W-AYCL048W-A HIR3P47171 1648 aa20.58■□□□□ 0.89
YCL048W-AYCL048W-A XRN1P22147 1528 aaKnown RBP20.32■□□□□ 0.84
YCL048W-AYCL048W-A DRS1P32892 752 aaKnown RBP20.12■□□□□ 0.81
YCL048W-AYCL048W-A THO2P53552 1597 aaKnown RBP20.12■□□□□ 0.81
YCL048W-AYCL048W-A REV3P14284 1504 aa20.07■□□□□ 0.8
YCL048W-AYCL048W-A BUD4P47136 1447 aa20.03■□□□□ 0.8
YCL048W-AYCL048W-A SIN3P22579 1536 aa19.98■□□□□ 0.79
YCL048W-AYCL048W-A ECM5Q03214 1411 aa19.95■□□□□ 0.78
YCL048W-AYCL048W-A SSK2P53599 1579 aa19.8■□□□□ 0.76
YCL048W-AYCL048W-A ATG2P53855 1592 aa19.75■□□□□ 0.75
YCL048W-AYCL048W-A MDS3P53094 1487 aa19.73■□□□□ 0.75
YCL048W-AYCL048W-A PEP1P32319 1579 aa19.68■□□□□ 0.74
YCL048W-AYCL048W-A TAF2P23255 1407 aa19.64■□□□□ 0.73
YCL048W-AYCL048W-A ESP1Q03018 1630 aa19.64■□□□□ 0.73
YCL048W-AYCL048W-A MYO2P19524 1574 aaKnown RBP19.57■□□□□ 0.72
YCL048W-AYCL048W-A SKI3P17883 1432 aaKnown RBP19.48■□□□□ 0.71
YCL048W-AYCL048W-A YPK9Q12697 1472 aa19.39■□□□□ 0.69
YCL048W-AYCL048W-A RSE1Q04693 1361 aaKnown RBP19.3■□□□□ 0.68
YCL048W-AYCL048W-A SCC2Q04002 1493 aa19.22■□□□□ 0.67
YCL048W-AYCL048W-A RPO31P04051 1460 aa19.13■□□□□ 0.65
YCL048W-AYCL048W-A POL1P13382 1468 aa19.13■□□□□ 0.65
YCL048W-AYCL048W-A BPT1P14772 1559 aa19.12■□□□□ 0.65
YCL048W-AYCL048W-A UFD4P33202 1483 aa19.09■□□□□ 0.65
YCL048W-AYCL048W-A RKR1Q04781 1562 aa18.98■□□□□ 0.63
YCL048W-AYCL048W-A YCF1P39109 1515 aaKnown RBP18.97■□□□□ 0.63
YCL048W-AYCL048W-A TOP2P06786 1428 aaKnown RBP18.95■□□□□ 0.62
YCL048W-AYCL048W-A STU1P38198 1513 aa18.94■□□□□ 0.62
YCL048W-AYCL048W-A TY2B-LR1P0C2J3 1770 aa18.92■□□□□ 0.62
YCL048W-AYCL048W-A TY2B-FP0CX63 1770 aa18.92■□□□□ 0.62
YCL048W-AYCL048W-A TY2B-GR2P0CX64 1770 aa18.92■□□□□ 0.62
YCL048W-AYCL048W-A TY2B-CP25384 1770 aa18.92■□□□□ 0.62
YCL048W-AYCL048W-A TY2B-DR2Q03494 1770 aa18.92■□□□□ 0.62
YCL048W-AYCL048W-A TY1B-DR1Q03855 1755 aa18.92■□□□□ 0.62
YCL048W-AYCL048W-A TY2B-DR3Q07791 1770 aaKnown RBP18.92■□□□□ 0.62
YCL048W-AYCL048W-A TY2B-OR1Q12113 1770 aa18.92■□□□□ 0.62
YCL048W-AYCL048W-A TY2B-DR1Q12472 1770 aa18.92■□□□□ 0.62
YCL048W-AYCL048W-A TY2B-OR2Q12501 1770 aa18.92■□□□□ 0.62
YCL048W-AYCL048W-A YOR1P53049 1477 aa18.88■□□□□ 0.61
YCL048W-AYCL048W-A SMC4Q12267 1418 aa18.82■□□□□ 0.6
YCL048W-AYCL048W-A TY1B-DR3Q99231 1755 aa18.77■□□□□ 0.6
YCL048W-AYCL048W-A YTA7P40340 1379 aa18.77■□□□□ 0.6
YCL048W-AYCL048W-A TY2B-BQ12491 1770 aa18.73■□□□□ 0.59
YCL048W-AYCL048W-A CDC25P04821 1589 aa18.72■□□□□ 0.59
YCL048W-AYCL048W-A TY1B-BRQ12193 1756 aa18.7■□□□□ 0.58
YCL048W-AYCL048W-A TY1B-GR3Q12316 1755 aa18.7■□□□□ 0.58
YCL048W-AYCL048W-A TY1B-ORQ92393 1755 aa18.7■□□□□ 0.58
YCL048W-AYCL048W-A MTC1P47018 478 aaKnown RBP18.69■□□□□ 0.58
YCL048W-AYCL048W-A CHD1P32657 1468 aa18.69■□□□□ 0.58
YCL048W-AYCL048W-A MYO4P32492 1471 aa18.68■□□□□ 0.58
YCL048W-AYCL048W-A TY1B-HO13535 1793 aa18.65■□□□□ 0.58
YCL048W-AYCL048W-A TY1B-DR5P0C2I2 1755 aa18.65■□□□□ 0.58
YCL048W-AYCL048W-A TY1B-DR6P0C2I3 1755 aa18.65■□□□□ 0.58
YCL048W-AYCL048W-A TY1B-LR2P0C2I5 1755 aa18.65■□□□□ 0.58
YCL048W-AYCL048W-A TY1B-LR3P0C2I6 1755 aaKnown RBP18.65■□□□□ 0.58
YCL048W-AYCL048W-A TY1B-PR1P0C2I9 1755 aaKnown RBP18.65■□□□□ 0.58
YCL048W-AYCL048W-A TY1B-PR2P0C2J0 1756 aa18.65■□□□□ 0.58
YCL048W-AYCL048W-A TY1B-PR3P0C2J1 1755 aaKnown RBP18.65■□□□□ 0.58
YCL048W-AYCL048W-A TY1B-JR1P47098 1755 aa18.65■□□□□ 0.58
YCL048W-AYCL048W-A TY1B-ML2Q03434 1755 aaKnown RBP18.65■□□□□ 0.58
YCL048W-AYCL048W-A TY1B-ER1Q03612 1755 aa18.65■□□□□ 0.58
YCL048W-AYCL048W-A TY1B-ML1Q04711 1755 aaKnown RBP18.65■□□□□ 0.58
YCL048W-AYCL048W-A TY1B-GR2Q12269 1755 aa18.65■□□□□ 0.58
YCL048W-AYCL048W-A TY1B-OLQ12273 1755 aa18.65■□□□□ 0.58
YCL048W-AYCL048W-A TY1B-PLQ12414 1755 aaKnown RBP18.65■□□□□ 0.58
YCL048W-AYCL048W-A PAN1P32521 1480 aa18.58■□□□□ 0.57
YCL048W-AYCL048W-A MMS22Q06164 1454 aa18.58■□□□□ 0.57
YCL048W-AYCL048W-A ESC1Q03661 1658 aaKnown RBP18.51■□□□□ 0.55
YCL048W-AYCL048W-A SPP41P38904 1435 aa18.51■□□□□ 0.55
YCL048W-AYCL048W-A RQC2Q12532 1038 aaKnown RBP18.47■□□□□ 0.55
YCL048W-AYCL048W-A DNF1P32660 1571 aa18.42■□□□□ 0.54
YCL048W-AYCL048W-A RPA190P10964 1664 aaKnown RBP18.4■□□□□ 0.54
YCL048W-AYCL048W-A VTH1P40438 1549 aa18.39■□□□□ 0.54
YCL048W-AYCL048W-A VTH2P40890 1549 aa18.39■□□□□ 0.54
YCL048W-AYCL048W-A TSC11P40061 1430 aa18.38■□□□□ 0.53
YCL048W-AYCL048W-A SNQ2P32568 1501 aaKnown RBP18.33■□□□□ 0.52
YCL048W-AYCL048W-A TRM732Q03496 1420 aa18.32■□□□□ 0.52
YCL048W-AYCL048W-A TY1B-JR2P47100 1755 aaKnown RBP18.32■□□□□ 0.52
YCL048W-AYCL048W-A TY1B-ER2Q03619 1755 aa18.32■□□□□ 0.52
YCL048W-AYCL048W-A TY1B-MR1Q04214 1755 aa18.32■□□□□ 0.52
YCL048W-AYCL048W-A TY1B-MR2Q04670 1755 aaKnown RBP18.32■□□□□ 0.52
YCL048W-AYCL048W-A TY1B-LR1Q12088 1755 aaKnown RBP18.32■□□□□ 0.52
YCL048W-AYCL048W-A TY1B-NL1Q12112 1755 aa18.32■□□□□ 0.52
YCL048W-AYCL048W-A TY1B-GR1Q12141 1755 aa18.32■□□□□ 0.52
YCL048W-AYCL048W-A TY1B-BLQ12490 1755 aa18.32■□□□□ 0.52
YCL048W-AYCL048W-A MET5P47169 1442 aa18.25■□□□□ 0.51
YCL048W-AYCL048W-A NTE1Q04958 1679 aa18.24■□□□□ 0.51
YCL048W-AYCL048W-A STH1P32597 1359 aa18.23■□□□□ 0.51
YCL048W-AYCL048W-A MLP2P40457 1679 aa18.22■□□□□ 0.51
Retrieved 100 of 5,963 RNA–protein pairs in 16.4 ms