RNA–Protein interactions for RNA: YBR200W

BEM1, Transcript of Protein containing SH3-domains, yeastyeast

Gene BEM1, Length 1,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BEM1YBR200W INO80P53115 1489 aa13.48□□□□□ -0.25
BEM1YBR200W MON2P48563 1636 aaPredicted RBP13.47□□□□□ -0.25
BEM1YBR200W DNA2P38859 1522 aa12.87□□□□□ -0.35
BEM1YBR200W SWR1Q05471 1514 aa12.76□□□□□ -0.37
BEM1YBR200W KOG1P38873 1557 aa12.58□□□□□ -0.4
BEM1YBR200W TY1B-DR4Q07793 1604 aa12.55□□□□□ -0.4
BEM1YBR200W TCB3Q03640 1545 aaKnown RBP12.51□□□□□ -0.41
BEM1YBR200W RSE1Q04693 1361 aaKnown RBP12.47□□□□□ -0.41
BEM1YBR200W SGS1P35187 1447 aa12.24□□□□□ -0.45
BEM1YBR200W HSL1P34244 1518 aa12.07□□□□□ -0.48
BEM1YBR200W SPT6P23615 1451 aaKnown RBP12.06□□□□□ -0.48
BEM1YBR200W ECM5Q03214 1411 aa11.93□□□□□ -0.5
BEM1YBR200W SPA2P23201 1466 aaKnown RBP11.9□□□□□ -0.5
BEM1YBR200W HIR3P47171 1648 aa11.81□□□□□ -0.52
BEM1YBR200W MTC1P47018 478 aaKnown RBP11.81□□□□□ -0.52
BEM1YBR200W BFR2Q06631 534 aaKnown RBP11.78□□□□□ -0.52
BEM1YBR200W RQC2Q12532 1038 aaKnown RBP11.76□□□□□ -0.53
BEM1YBR200W BUD4P47136 1447 aa11.75□□□□□ -0.53
BEM1YBR200W THO2P53552 1597 aaKnown RBP11.71□□□□□ -0.53
BEM1YBR200W MDS3P53094 1487 aa11.67□□□□□ -0.54
BEM1YBR200W XRN1P22147 1528 aaKnown RBP11.56□□□□□ -0.56
BEM1YBR200W PEP1P32319 1579 aa11.55□□□□□ -0.56
BEM1YBR200W REV3P14284 1504 aa11.49□□□□□ -0.57
BEM1YBR200W ATG2P53855 1592 aa11.43□□□□□ -0.58
BEM1YBR200W BPT1P14772 1559 aa11.38□□□□□ -0.59
BEM1YBR200W SSN2P38931 1420 aa11.31□□□□□ -0.6
BEM1YBR200W TAF2P23255 1407 aa11.26□□□□□ -0.61
BEM1YBR200W SKI3P17883 1432 aaKnown RBP11.23□□□□□ -0.61
BEM1YBR200W YCF1P39109 1515 aaKnown RBP11.17□□□□□ -0.62
BEM1YBR200W SSK2P53599 1579 aa11.12□□□□□ -0.63
BEM1YBR200W SIN3P22579 1536 aa11.12□□□□□ -0.63
BEM1YBR200W UFD4P33202 1483 aa11.03□□□□□ -0.64
BEM1YBR200W ESP1Q03018 1630 aa11.02□□□□□ -0.65
BEM1YBR200W DRS1P32892 752 aaKnown RBP11□□□□□ -0.65
BEM1YBR200W NOP2P40991 618 aaKnown RBP10.96□□□□□ -0.65
BEM1YBR200W SCC2Q04002 1493 aa10.92□□□□□ -0.66
BEM1YBR200W MIF2P35201 549 aa10.91□□□□□ -0.66
BEM1YBR200W DNF1P32660 1571 aa10.91□□□□□ -0.66
BEM1YBR200W CDC25P04821 1589 aa10.86□□□□□ -0.67
BEM1YBR200W CHD1P32657 1468 aa10.86□□□□□ -0.67
BEM1YBR200W YPK9Q12697 1472 aa10.86□□□□□ -0.67
BEM1YBR200W MET5P47169 1442 aa10.84□□□□□ -0.67
BEM1YBR200W ESC1Q03661 1658 aaKnown RBP10.84□□□□□ -0.67
BEM1YBR200W RPO31P04051 1460 aa10.83□□□□□ -0.68
BEM1YBR200W TY2B-LR1P0C2J3 1770 aa10.83□□□□□ -0.68
BEM1YBR200W TY2B-FP0CX63 1770 aa10.83□□□□□ -0.68
BEM1YBR200W TY2B-GR2P0CX64 1770 aa10.83□□□□□ -0.68
BEM1YBR200W TY2B-CP25384 1770 aa10.83□□□□□ -0.68
BEM1YBR200W TY2B-DR2Q03494 1770 aa10.83□□□□□ -0.68
BEM1YBR200W TY1B-DR1Q03855 1755 aa10.83□□□□□ -0.68
BEM1YBR200W TY2B-DR3Q07791 1770 aaKnown RBP10.83□□□□□ -0.68
BEM1YBR200W TY2B-OR1Q12113 1770 aa10.83□□□□□ -0.68
BEM1YBR200W TY2B-DR1Q12472 1770 aa10.83□□□□□ -0.68
BEM1YBR200W TY2B-OR2Q12501 1770 aa10.83□□□□□ -0.68
BEM1YBR200W MYO2P19524 1574 aaKnown RBP10.81□□□□□ -0.68
BEM1YBR200W TY1B-BRQ12193 1756 aa10.8□□□□□ -0.68
BEM1YBR200W TY1B-GR3Q12316 1755 aa10.8□□□□□ -0.68
BEM1YBR200W TY1B-ORQ92393 1755 aa10.8□□□□□ -0.68
BEM1YBR200W BNI1P41832 1953 aa10.77□□□□□ -0.69
BEM1YBR200W LTE1P07866 1435 aa10.76□□□□□ -0.69
BEM1YBR200W PAN1P32521 1480 aa10.74□□□□□ -0.69
BEM1YBR200W RKR1Q04781 1562 aa10.73□□□□□ -0.69
BEM1YBR200W RPA190P10964 1664 aaKnown RBP10.73□□□□□ -0.69
BEM1YBR200W NSR1P27476 414 aaKnown RBP RIP-Chip data10.71□□□□□ -0.69not detected
BEM1YBR200W ITT1Q04638 464 aa10.7□□□□□ -0.7
BEM1YBR200W URN1Q06525 465 aaKnown RBP10.69□□□□□ -0.7
BEM1YBR200W TY2B-BQ12491 1770 aa10.67□□□□□ -0.7
BEM1YBR200W TY1B-HO13535 1793 aa10.66□□□□□ -0.7
BEM1YBR200W TY1B-DR5P0C2I2 1755 aa10.66□□□□□ -0.7
BEM1YBR200W TY1B-DR6P0C2I3 1755 aa10.66□□□□□ -0.7
BEM1YBR200W TY1B-LR2P0C2I5 1755 aa10.66□□□□□ -0.7
BEM1YBR200W TY1B-LR3P0C2I6 1755 aaKnown RBP10.66□□□□□ -0.7
BEM1YBR200W TY1B-PR1P0C2I9 1755 aaKnown RBP10.66□□□□□ -0.7
BEM1YBR200W TY1B-PR2P0C2J0 1756 aa10.66□□□□□ -0.7
BEM1YBR200W TY1B-PR3P0C2J1 1755 aaKnown RBP10.66□□□□□ -0.7
BEM1YBR200W TY1B-JR1P47098 1755 aa10.66□□□□□ -0.7
BEM1YBR200W TY1B-ML2Q03434 1755 aaKnown RBP10.66□□□□□ -0.7
BEM1YBR200W TY1B-ER1Q03612 1755 aa10.66□□□□□ -0.7
BEM1YBR200W TY1B-ML1Q04711 1755 aaKnown RBP10.66□□□□□ -0.7
BEM1YBR200W TY1B-GR2Q12269 1755 aa10.66□□□□□ -0.7
BEM1YBR200W TY1B-OLQ12273 1755 aa10.66□□□□□ -0.7
BEM1YBR200W TY1B-PLQ12414 1755 aaKnown RBP10.66□□□□□ -0.7
BEM1YBR200W EBP2P36049 427 aaKnown RBP10.64□□□□□ -0.71
BEM1YBR200W TY1B-DR3Q99231 1755 aa10.63□□□□□ -0.71
BEM1YBR200W CAB3P36076 571 aa10.63□□□□□ -0.71
BEM1YBR200W GEA2P39993 1459 aaKnown RBP10.62□□□□□ -0.71
BEM1YBR200W ABP1P15891 592 aaKnown RBP10.62□□□□□ -0.71
BEM1YBR200W TOP2P06786 1428 aaKnown RBP10.61□□□□□ -0.71
BEM1YBR200W MMS22Q06164 1454 aa10.59□□□□□ -0.71
BEM1YBR200W YFR006WP43590 535 aa10.58□□□□□ -0.72
BEM1YBR200W YRF1-1P0CX20 1796 aa10.55□□□□□ -0.72
BEM1YBR200W YRF1-5P0CX21 1796 aa10.55□□□□□ -0.72
BEM1YBR200W YRF1-8P0CX22 1796 aa10.55□□□□□ -0.72
BEM1YBR200W TRM732Q03496 1420 aa10.54□□□□□ -0.72
BEM1YBR200W MMS1Q06211 1407 aa10.54□□□□□ -0.72
BEM1YBR200W TAF7Q05021 590 aa10.5□□□□□ -0.73
BEM1YBR200W NUP159P40477 1460 aa10.48□□□□□ -0.73
BEM1YBR200W VPS15P22219 1454 aa10.45□□□□□ -0.74
BEM1YBR200W DRS2P39524 1355 aa10.45□□□□□ -0.74
BEM1YBR200W SIS2P36024 562 aa10.44□□□□□ -0.74
Retrieved 100 of 5,963 RNA–protein pairs in 46.2 ms