RNA–Protein interactions for RNA: YBR195C

MSI1, Transcript of Subunit of chromatin assembly factor I (CAF-1), yeastyeast

Gene MSI1, Length 1,269 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSI1YBR195C INO80P53115 1489 aa14.15□□□□□ -0.14
MSI1YBR195C MON2P48563 1636 aaPredicted RBP14.11□□□□□ -0.15
MSI1YBR195C SGS1P35187 1447 aa13.82□□□□□ -0.2
MSI1YBR195C TCB3Q03640 1545 aaKnown RBP13.78□□□□□ -0.2
MSI1YBR195C TY1B-DR4Q07793 1604 aa13.61□□□□□ -0.23
MSI1YBR195C SWR1Q05471 1514 aa13.6□□□□□ -0.23
MSI1YBR195C DNA2P38859 1522 aa13.45□□□□□ -0.26
MSI1YBR195C KOG1P38873 1557 aa13.35□□□□□ -0.27
MSI1YBR195C SPT6P23615 1451 aaKnown RBP13.28□□□□□ -0.28
MSI1YBR195C HSL1P34244 1518 aa13.28□□□□□ -0.28
MSI1YBR195C SPA2P23201 1466 aaKnown RBP13.23□□□□□ -0.29
MSI1YBR195C MTC1P47018 478 aaKnown RBP13.16□□□□□ -0.3
MSI1YBR195C DRS1P32892 752 aaKnown RBP13.08□□□□□ -0.32
MSI1YBR195C HIR3P47171 1648 aa13□□□□□ -0.33
MSI1YBR195C SSN2P38931 1420 aa12.91□□□□□ -0.34
MSI1YBR195C XRN1P22147 1528 aaKnown RBP12.85□□□□□ -0.35
MSI1YBR195C RSE1Q04693 1361 aaKnown RBP12.83□□□□□ -0.36
MSI1YBR195C ECM5Q03214 1411 aa12.83□□□□□ -0.36
MSI1YBR195C BUD4P47136 1447 aa12.8□□□□□ -0.36
MSI1YBR195C THO2P53552 1597 aaKnown RBP12.77□□□□□ -0.36
MSI1YBR195C REV3P14284 1504 aa12.62□□□□□ -0.39
MSI1YBR195C MDS3P53094 1487 aa12.62□□□□□ -0.39
MSI1YBR195C TAF2P23255 1407 aa12.52□□□□□ -0.41
MSI1YBR195C ATG2P53855 1592 aa12.49□□□□□ -0.41
MSI1YBR195C PEP1P32319 1579 aa12.48□□□□□ -0.41
MSI1YBR195C SIN3P22579 1536 aa12.47□□□□□ -0.41
MSI1YBR195C SKI3P17883 1432 aaKnown RBP12.44□□□□□ -0.42
MSI1YBR195C SSK2P53599 1579 aa12.39□□□□□ -0.43
MSI1YBR195C ESP1Q03018 1630 aa12.29□□□□□ -0.44
MSI1YBR195C BPT1P14772 1559 aa12.26□□□□□ -0.45
MSI1YBR195C MYO2P19524 1574 aaKnown RBP12.23□□□□□ -0.45
MSI1YBR195C YPK9Q12697 1472 aa12.17□□□□□ -0.46
MSI1YBR195C UFD4P33202 1483 aa12.15□□□□□ -0.46
MSI1YBR195C SCC2Q04002 1493 aa12.11□□□□□ -0.47
MSI1YBR195C YCF1P39109 1515 aaKnown RBP12.06□□□□□ -0.48
MSI1YBR195C RPO31P04051 1460 aa12.03□□□□□ -0.48
MSI1YBR195C RQC2Q12532 1038 aaKnown RBP11.97□□□□□ -0.49
MSI1YBR195C TOP2P06786 1428 aaKnown RBP11.92□□□□□ -0.5
MSI1YBR195C POL1P13382 1468 aa11.91□□□□□ -0.5
MSI1YBR195C CHD1P32657 1468 aa11.89□□□□□ -0.51
MSI1YBR195C RKR1Q04781 1562 aa11.89□□□□□ -0.51
MSI1YBR195C CDC25P04821 1589 aa11.88□□□□□ -0.51
MSI1YBR195C TY2B-LR1P0C2J3 1770 aa11.87□□□□□ -0.51
MSI1YBR195C TY2B-FP0CX63 1770 aa11.87□□□□□ -0.51
MSI1YBR195C TY2B-GR2P0CX64 1770 aa11.87□□□□□ -0.51
MSI1YBR195C TY2B-CP25384 1770 aa11.87□□□□□ -0.51
MSI1YBR195C TY2B-DR2Q03494 1770 aa11.87□□□□□ -0.51
MSI1YBR195C TY1B-DR1Q03855 1755 aa11.87□□□□□ -0.51
MSI1YBR195C TY2B-DR3Q07791 1770 aaKnown RBP11.87□□□□□ -0.51
MSI1YBR195C TY2B-OR1Q12113 1770 aa11.87□□□□□ -0.51
MSI1YBR195C TY2B-DR1Q12472 1770 aa11.87□□□□□ -0.51
MSI1YBR195C TY2B-OR2Q12501 1770 aa11.87□□□□□ -0.51
MSI1YBR195C STU1P38198 1513 aa11.85□□□□□ -0.51
MSI1YBR195C PAN1P32521 1480 aa11.8□□□□□ -0.52
MSI1YBR195C YOR1P53049 1477 aa11.79□□□□□ -0.52
MSI1YBR195C ESC1Q03661 1658 aaKnown RBP11.78□□□□□ -0.52
MSI1YBR195C SMC4Q12267 1418 aa11.77□□□□□ -0.52
MSI1YBR195C MMS22Q06164 1454 aa11.76□□□□□ -0.53
MSI1YBR195C TY1B-BRQ12193 1756 aa11.76□□□□□ -0.53
MSI1YBR195C TY1B-GR3Q12316 1755 aa11.76□□□□□ -0.53
MSI1YBR195C TY1B-ORQ92393 1755 aa11.76□□□□□ -0.53
MSI1YBR195C DNF1P32660 1571 aa11.75□□□□□ -0.53
MSI1YBR195C TY2B-BQ12491 1770 aa11.73□□□□□ -0.53
MSI1YBR195C TY1B-DR3Q99231 1755 aa11.72□□□□□ -0.53
MSI1YBR195C MET5P47169 1442 aa11.69□□□□□ -0.54
MSI1YBR195C TRM732Q03496 1420 aa11.69□□□□□ -0.54
MSI1YBR195C TY1B-HO13535 1793 aa11.69□□□□□ -0.54
MSI1YBR195C TY1B-DR5P0C2I2 1755 aa11.69□□□□□ -0.54
MSI1YBR195C TY1B-DR6P0C2I3 1755 aa11.69□□□□□ -0.54
MSI1YBR195C TY1B-LR2P0C2I5 1755 aa11.69□□□□□ -0.54
MSI1YBR195C TY1B-LR3P0C2I6 1755 aaKnown RBP11.69□□□□□ -0.54
MSI1YBR195C TY1B-PR1P0C2I9 1755 aaKnown RBP11.69□□□□□ -0.54
MSI1YBR195C TY1B-PR2P0C2J0 1756 aa11.69□□□□□ -0.54
MSI1YBR195C TY1B-PR3P0C2J1 1755 aaKnown RBP11.69□□□□□ -0.54
MSI1YBR195C TY1B-JR1P47098 1755 aa11.69□□□□□ -0.54
MSI1YBR195C TY1B-ML2Q03434 1755 aaKnown RBP11.69□□□□□ -0.54
MSI1YBR195C TY1B-ER1Q03612 1755 aa11.69□□□□□ -0.54
MSI1YBR195C TY1B-ML1Q04711 1755 aaKnown RBP11.69□□□□□ -0.54
MSI1YBR195C TY1B-GR2Q12269 1755 aa11.69□□□□□ -0.54
MSI1YBR195C TY1B-OLQ12273 1755 aa11.69□□□□□ -0.54
MSI1YBR195C TY1B-PLQ12414 1755 aaKnown RBP11.69□□□□□ -0.54
MSI1YBR195C SPP41P38904 1435 aa11.69□□□□□ -0.54
MSI1YBR195C YTA7P40340 1379 aa11.67□□□□□ -0.54
MSI1YBR195C RPA190P10964 1664 aaKnown RBP11.65□□□□□ -0.55
MSI1YBR195C TSC11P40061 1430 aa11.6□□□□□ -0.55
MSI1YBR195C MYO4P32492 1471 aa11.59□□□□□ -0.55
MSI1YBR195C VTH1P40438 1549 aa11.57□□□□□ -0.56
MSI1YBR195C VTH2P40890 1549 aa11.57□□□□□ -0.56
MSI1YBR195C LTE1P07866 1435 aa11.54□□□□□ -0.56
MSI1YBR195C NUP159P40477 1460 aa11.53□□□□□ -0.56
MSI1YBR195C NTE1Q04958 1679 aa11.49□□□□□ -0.57
MSI1YBR195C TY1B-JR2P47100 1755 aaKnown RBP11.47□□□□□ -0.57
MSI1YBR195C TY1B-ER2Q03619 1755 aa11.47□□□□□ -0.57
MSI1YBR195C TY1B-MR1Q04214 1755 aa11.47□□□□□ -0.57
MSI1YBR195C TY1B-MR2Q04670 1755 aaKnown RBP11.47□□□□□ -0.57
MSI1YBR195C TY1B-LR1Q12088 1755 aaKnown RBP11.47□□□□□ -0.57
MSI1YBR195C TY1B-NL1Q12112 1755 aa11.47□□□□□ -0.57
MSI1YBR195C TY1B-GR1Q12141 1755 aa11.47□□□□□ -0.57
MSI1YBR195C TY1B-BLQ12490 1755 aa11.47□□□□□ -0.57
MSI1YBR195C STH1P32597 1359 aa11.47□□□□□ -0.57
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms