RNA–Protein interactions for RNA: YBR082C

UBC4, Transcript of Ubiquitin-conjugating enzyme (E2), yeastyeast

Gene UBC4, Length 447 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC4YBR082C SGS1P35187 1447 aa9.81□□□□□ -0.84
UBC4YBR082C INO80P53115 1489 aa9.66□□□□□ -0.86
UBC4YBR082C TCB3Q03640 1545 aaKnown RBP9.6□□□□□ -0.87
UBC4YBR082C MON2P48563 1636 aaPredicted RBP9.57□□□□□ -0.88
UBC4YBR082C TY1B-DR4Q07793 1604 aa9.49□□□□□ -0.89
UBC4YBR082C SWR1Q05471 1514 aa9.33□□□□□ -0.92
UBC4YBR082C SPA2P23201 1466 aaKnown RBP9.29□□□□□ -0.92
UBC4YBR082C SSN2P38931 1420 aa9.29□□□□□ -0.92
UBC4YBR082C HSL1P34244 1518 aa9.28□□□□□ -0.92
UBC4YBR082C SPT6P23615 1451 aaKnown RBP9.27□□□□□ -0.93
UBC4YBR082C DNA2P38859 1522 aa9.12□□□□□ -0.95
UBC4YBR082C HIR3P47171 1648 aa9.11□□□□□ -0.95
UBC4YBR082C KOG1P38873 1557 aa9.09□□□□□ -0.95
UBC4YBR082C DRS1P32892 752 aaKnown RBP9.04□□□□□ -0.96
UBC4YBR082C XRN1P22147 1528 aaKnown RBP9.04□□□□□ -0.96
UBC4YBR082C REV3P14284 1504 aa8.9□□□□□ -0.98
UBC4YBR082C THO2P53552 1597 aaKnown RBP8.87□□□□□ -0.99
UBC4YBR082C BUD4P47136 1447 aa8.86□□□□□ -0.99
UBC4YBR082C ECM5Q03214 1411 aa8.83□□□□□ -1
UBC4YBR082C SIN3P22579 1536 aa8.82□□□□□ -1
UBC4YBR082C TAF2P23255 1407 aa8.8□□□□□ -1
UBC4YBR082C SSK2P53599 1579 aa8.77□□□□□ -1.01
UBC4YBR082C ATG2P53855 1592 aa8.73□□□□□ -1.01
UBC4YBR082C ESP1Q03018 1630 aa8.72□□□□□ -1.01
UBC4YBR082C MDS3P53094 1487 aa8.71□□□□□ -1.01
UBC4YBR082C SKI3P17883 1432 aaKnown RBP8.69□□□□□ -1.02
UBC4YBR082C MYO2P19524 1574 aaKnown RBP8.69□□□□□ -1.02
UBC4YBR082C PEP1P32319 1579 aa8.66□□□□□ -1.02
UBC4YBR082C YPK9Q12697 1472 aa8.57□□□□□ -1.04
UBC4YBR082C RSE1Q04693 1361 aaKnown RBP8.52□□□□□ -1.05
UBC4YBR082C SCC2Q04002 1493 aa8.51□□□□□ -1.05
UBC4YBR082C POL1P13382 1468 aa8.49□□□□□ -1.05
UBC4YBR082C UFD4P33202 1483 aa8.48□□□□□ -1.05
UBC4YBR082C RPO31P04051 1460 aa8.46□□□□□ -1.05
UBC4YBR082C BPT1P14772 1559 aa8.46□□□□□ -1.06
UBC4YBR082C STU1P38198 1513 aa8.45□□□□□ -1.06
UBC4YBR082C RKR1Q04781 1562 aa8.45□□□□□ -1.06
UBC4YBR082C YCF1P39109 1515 aaKnown RBP8.4□□□□□ -1.06
UBC4YBR082C TOP2P06786 1428 aaKnown RBP8.4□□□□□ -1.06
UBC4YBR082C TY2B-LR1P0C2J3 1770 aa8.39□□□□□ -1.07
UBC4YBR082C TY2B-FP0CX63 1770 aa8.39□□□□□ -1.07
UBC4YBR082C TY2B-GR2P0CX64 1770 aa8.39□□□□□ -1.07
UBC4YBR082C TY2B-CP25384 1770 aa8.39□□□□□ -1.07
UBC4YBR082C TY2B-DR2Q03494 1770 aa8.39□□□□□ -1.07
UBC4YBR082C TY1B-DR1Q03855 1755 aa8.39□□□□□ -1.07
UBC4YBR082C TY2B-DR3Q07791 1770 aaKnown RBP8.39□□□□□ -1.07
UBC4YBR082C TY2B-OR1Q12113 1770 aa8.39□□□□□ -1.07
UBC4YBR082C TY2B-DR1Q12472 1770 aa8.39□□□□□ -1.07
UBC4YBR082C TY2B-OR2Q12501 1770 aa8.39□□□□□ -1.07
UBC4YBR082C YOR1P53049 1477 aa8.38□□□□□ -1.07
UBC4YBR082C MTC1P47018 478 aaKnown RBP8.37□□□□□ -1.07
UBC4YBR082C YTA7P40340 1379 aa8.36□□□□□ -1.07
UBC4YBR082C SMC4Q12267 1418 aa8.35□□□□□ -1.07
UBC4YBR082C RQC2Q12532 1038 aaKnown RBP8.33□□□□□ -1.08
UBC4YBR082C TY1B-DR3Q99231 1755 aa8.33□□□□□ -1.08
UBC4YBR082C TY2B-BQ12491 1770 aa8.31□□□□□ -1.08
UBC4YBR082C CHD1P32657 1468 aa8.31□□□□□ -1.08
UBC4YBR082C MYO4P32492 1471 aa8.29□□□□□ -1.08
UBC4YBR082C MMS22Q06164 1454 aa8.29□□□□□ -1.08
UBC4YBR082C TY1B-BRQ12193 1756 aa8.28□□□□□ -1.08
UBC4YBR082C TY1B-GR3Q12316 1755 aa8.28□□□□□ -1.08
UBC4YBR082C TY1B-ORQ92393 1755 aa8.28□□□□□ -1.08
UBC4YBR082C CDC25P04821 1589 aa8.28□□□□□ -1.08
UBC4YBR082C TY1B-HO13535 1793 aa8.26□□□□□ -1.09
UBC4YBR082C TY1B-DR5P0C2I2 1755 aa8.26□□□□□ -1.09
UBC4YBR082C TY1B-DR6P0C2I3 1755 aa8.26□□□□□ -1.09
UBC4YBR082C TY1B-LR2P0C2I5 1755 aa8.26□□□□□ -1.09
UBC4YBR082C TY1B-LR3P0C2I6 1755 aaKnown RBP8.26□□□□□ -1.09
UBC4YBR082C TY1B-PR1P0C2I9 1755 aaKnown RBP8.26□□□□□ -1.09
UBC4YBR082C TY1B-PR2P0C2J0 1756 aa8.26□□□□□ -1.09
UBC4YBR082C TY1B-PR3P0C2J1 1755 aaKnown RBP8.26□□□□□ -1.09
UBC4YBR082C TY1B-JR1P47098 1755 aa8.26□□□□□ -1.09
UBC4YBR082C TY1B-ML2Q03434 1755 aaKnown RBP8.26□□□□□ -1.09
UBC4YBR082C TY1B-ER1Q03612 1755 aa8.26□□□□□ -1.09
UBC4YBR082C TY1B-ML1Q04711 1755 aaKnown RBP8.26□□□□□ -1.09
UBC4YBR082C TY1B-GR2Q12269 1755 aa8.26□□□□□ -1.09
UBC4YBR082C TY1B-OLQ12273 1755 aa8.26□□□□□ -1.09
UBC4YBR082C TY1B-PLQ12414 1755 aaKnown RBP8.26□□□□□ -1.09
UBC4YBR082C SAS10Q12136 610 aaPredicted RBP8.24□□□□□ -1.09
UBC4YBR082C SPP41P38904 1435 aa8.22□□□□□ -1.09
UBC4YBR082C ESC1Q03661 1658 aaKnown RBP8.22□□□□□ -1.09
UBC4YBR082C PAN1P32521 1480 aa8.22□□□□□ -1.09
UBC4YBR082C SNQ2P32568 1501 aaKnown RBP8.18□□□□□ -1.1
UBC4YBR082C STH1P32597 1359 aa8.16□□□□□ -1.1
UBC4YBR082C VTH1P40438 1549 aa8.16□□□□□ -1.1
UBC4YBR082C VTH2P40890 1549 aa8.16□□□□□ -1.1
UBC4YBR082C TSC11P40061 1430 aa8.15□□□□□ -1.1
UBC4YBR082C TAF7Q05021 590 aa8.15□□□□□ -1.1
UBC4YBR082C MLP2P40457 1679 aa8.14□□□□□ -1.11
UBC4YBR082C TRM732Q03496 1420 aa8.14□□□□□ -1.11
UBC4YBR082C DNF1P32660 1571 aa8.14□□□□□ -1.11
UBC4YBR082C RPA190P10964 1664 aaKnown RBP8.13□□□□□ -1.11
UBC4YBR082C TY1B-JR2P47100 1755 aaKnown RBP8.12□□□□□ -1.11
UBC4YBR082C TY1B-ER2Q03619 1755 aa8.12□□□□□ -1.11
UBC4YBR082C TY1B-MR1Q04214 1755 aa8.12□□□□□ -1.11
UBC4YBR082C TY1B-MR2Q04670 1755 aaKnown RBP8.12□□□□□ -1.11
UBC4YBR082C TY1B-LR1Q12088 1755 aaKnown RBP8.12□□□□□ -1.11
UBC4YBR082C TY1B-NL1Q12112 1755 aa8.12□□□□□ -1.11
UBC4YBR082C TY1B-GR1Q12141 1755 aa8.12□□□□□ -1.11
UBC4YBR082C TY1B-BLQ12490 1755 aa8.12□□□□□ -1.11
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms