RNA–Protein interactions for RNA: YBR081C

SPT7, Transcript of Subunit of the SAGA transcriptional regulatory complex, yeastyeast

Gene SPT7, Length 3,999 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT7YBR081C DRS1P32892 752 aaKnown RBP3.07□□□□□ -1.92
SPT7YBR081C FAP1P53971 965 aa3.06□□□□□ -1.92
SPT7YBR081C MTC1P47018 478 aaKnown RBP2.94□□□□□ -1.94
SPT7YBR081C PRY3P47033 881 aa2.8□□□□□ -1.96
SPT7YBR081C BFR2Q06631 534 aaKnown RBP2.62□□□□□ -1.99
SPT7YBR081C RPG1P38249 964 aaKnown RBP2.56□□□□□ -2
SPT7YBR081C ISW2Q08773 1120 aa2.55□□□□□ -2
SPT7YBR081C DIP2Q12220 943 aaPredicted RBP2.55□□□□□ -2
SPT7YBR081C REB1P21538 810 aa2.54□□□□□ -2
SPT7YBR081C TSR3Q12094 313 aaKnown RBP2.54□□□□□ -2
SPT7YBR081C AAD16Q02895 342 aa2.52□□□□□ -2.01
SPT7YBR081C RPL17AP05740 184 aaKnown RBP2.48□□□□□ -2.01
SPT7YBR081C RPL17BP46990 184 aaKnown RBP2.48□□□□□ -2.01
SPT7YBR081C RSE1Q04693 1361 aaKnown RBP2.46□□□□□ -2.02
SPT7YBR081C MRPL32P25348 183 aa2.43□□□□□ -2.02
SPT7YBR081C DCD1P06773 312 aa2.39□□□□□ -2.03
SPT7YBR081C PRI1P10363 409 aa2.37□□□□□ -2.03
SPT7YBR081C HAA1Q12753 694 aaKnown RBP2.36□□□□□ -2.03
SPT7YBR081C YAH1Q12184 172 aaKnown RBP2.35□□□□□ -2.03
SPT7YBR081C AVT3P36062 692 aa2.35□□□□□ -2.03
SPT7YBR081C YCK3P39962 524 aa2.34□□□□□ -2.04
SPT7YBR081C TFA1P36100 482 aa2.31□□□□□ -2.04
SPT7YBR081C PTP3P40048 928 aa2.31□□□□□ -2.04
SPT7YBR081C HOP09932 586 aa2.29□□□□□ -2.04
SPT7YBR081C YIL055CP40523 627 aaKnown RBP2.28□□□□□ -2.04
SPT7YBR081C CDC27P38042 758 aa2.21□□□□□ -2.06
SPT7YBR081C SCY1P53009 804 aa2.21□□□□□ -2.06
SPT7YBR081C PIB1Q06651 286 aa2.17□□□□□ -2.06
SPT7YBR081C YGL015CP33199 130 aa2.16□□□□□ -2.06
SPT7YBR081C YKR023WP36119 530 aaKnown RBP2.14□□□□□ -2.07
SPT7YBR081C MAP2P38174 421 aaKnown RBP2.14□□□□□ -2.07
SPT7YBR081C OXP1P28273 1286 aa2.12□□□□□ -2.07
SPT7YBR081C WSC3Q12215 556 aa2.12□□□□□ -2.07
SPT7YBR081C SPT21P35209 758 aa2.12□□□□□ -2.07
SPT7YBR081C GTT3P39996 337 aa2.11□□□□□ -2.07
SPT7YBR081C SLX5P32828 619 aaKnown RBP2.11□□□□□ -2.07
SPT7YBR081C BBC1P47068 1157 aa2.09□□□□□ -2.07
SPT7YBR081C ARP8Q12386 881 aaKnown RBP RIP-Chip data2.08□□□□□ -2.08 RIP-Chip
SPT7YBR081C RCR1P38212 213 aa2.08□□□□□ -2.08
SPT7YBR081C BCH2P36122 765 aa2.08□□□□□ -2.08
SPT7YBR081C CST9Q06032 482 aa2.08□□□□□ -2.08
SPT7YBR081C SIS1P25294 352 aaKnown RBP2.08□□□□□ -2.08
SPT7YBR081C TIF4632P39936 914 aaKnown RBP2.08□□□□□ -2.08
SPT7YBR081C INO80P53115 1489 aa2.07□□□□□ -2.08
SPT7YBR081C TFC8Q12308 588 aa2.06□□□□□ -2.08
SPT7YBR081C RIM101P33400 625 aa2.05□□□□□ -2.08
SPT7YBR081C YLR271WQ06152 274 aa2.05□□□□□ -2.08
SPT7YBR081C YFR006WP43590 535 aa2.04□□□□□ -2.08
SPT7YBR081C MRM1P25270 412 aa2.03□□□□□ -2.08
SPT7YBR081C RSM7P47150 247 aa2.02□□□□□ -2.09
SPT7YBR081C AI2P03876 854 aa2.01□□□□□ -2.09
SPT7YBR081C MIF2P35201 549 aa2.01□□□□□ -2.09
SPT7YBR081C EPS1P40557 701 aa2□□□□□ -2.09
SPT7YBR081C SSP1P38871 571 aa2□□□□□ -2.09
SPT7YBR081C UBP9P39967 754 aa2□□□□□ -2.09
SPT7YBR081C RQC2Q12532 1038 aaKnown RBP2□□□□□ -2.09
SPT7YBR081C DMA1P38823 416 aa1.99□□□□□ -2.09
SPT7YBR081C YJL171CP46992 396 aa1.99□□□□□ -2.09
SPT7YBR081C BDF1P35817 686 aa1.98□□□□□ -2.09
SPT7YBR081C TCB3Q03640 1545 aaKnown RBP1.98□□□□□ -2.09
SPT7YBR081C SET4P42948 560 aa1.97□□□□□ -2.09
SPT7YBR081C YBL029C-AQ3E756 94 aa1.96□□□□□ -2.1
SPT7YBR081C SPP1Q03012 353 aa1.95□□□□□ -2.1
SPT7YBR081C TFG1P41895 735 aaPredicted RBP1.95□□□□□ -2.1
SPT7YBR081C UBP10P53874 792 aaPredicted RBP1.95□□□□□ -2.1
SPT7YBR081C PEX29Q03370 554 aa1.94□□□□□ -2.1
SPT7YBR081C SPA2P23201 1466 aaKnown RBP1.94□□□□□ -2.1
SPT7YBR081C YOR238WQ08634 303 aa1.93□□□□□ -2.1
SPT7YBR081C DCW1P36091 449 aa1.93□□□□□ -2.1
SPT7YBR081C DBP1P24784 617 aaKnown RBP1.92□□□□□ -2.1
SPT7YBR081C SPT6P23615 1451 aaKnown RBP1.9□□□□□ -2.1
SPT7YBR081C SGS1P35187 1447 aa1.9□□□□□ -2.1
SPT7YBR081C YAP5P40574 245 aa1.9□□□□□ -2.11
SPT7YBR081C STS1P38637 319 aa1.89□□□□□ -2.11
SPT7YBR081C MON2P48563 1636 aaPredicted RBP1.89□□□□□ -2.11
SPT7YBR081C MGA2P40578 1113 aa1.88□□□□□ -2.11
SPT7YBR081C ULI1P43604 169 aa1.88□□□□□ -2.11
SPT7YBR081C PSD2P53037 1138 aaKnown RBP1.88□□□□□ -2.11
SPT7YBR081C ATH1P48016 1211 aa1.88□□□□□ -2.11
SPT7YBR081C TY1B-DR4Q07793 1604 aa1.87□□□□□ -2.11
SPT7YBR081C NSR1P27476 414 aaKnown RBP RIP-Chip data1.87□□□□□ -2.11not detected
SPT7YBR081C RAM2P29703 316 aa1.87□□□□□ -2.11
SPT7YBR081C RTG3P38165 486 aa1.87□□□□□ -2.11
SPT7YBR081C SAS10Q12136 610 aaPredicted RBP1.87□□□□□ -2.11
SPT7YBR081C YDR344CQ05510 147 aa1.86□□□□□ -2.11
SPT7YBR081C SAP30P38429 201 aa1.86□□□□□ -2.11
SPT7YBR081C ELP4Q02884 456 aaKnown RBP1.86□□□□□ -2.11
SPT7YBR081C NOP53Q12080 455 aaKnown RBP1.86□□□□□ -2.11
SPT7YBR081C SPB4P25808 606 aaPredicted RBP1.85□□□□□ -2.11
SPT7YBR081C GYP5Q12344 894 aa1.85□□□□□ -2.11
SPT7YBR081C THO2P53552 1597 aaKnown RBP1.84□□□□□ -2.12
SPT7YBR081C KIC1P38692 1080 aa1.84□□□□□ -2.12
SPT7YBR081C VPS29P38759 282 aa1.83□□□□□ -2.12
SPT7YBR081C KOG1P38873 1557 aa1.83□□□□□ -2.12
SPT7YBR081C SIN3P22579 1536 aa1.83□□□□□ -2.12
SPT7YBR081C EDS1P38073 919 aa1.83□□□□□ -2.12
SPT7YBR081C YPR148CQ06523 435 aa1.83□□□□□ -2.12
SPT7YBR081C LDB19Q12502 818 aa1.83□□□□□ -2.12
SPT7YBR081C VPS70P47161 811 aa1.83□□□□□ -2.12
SPT7YBR081C TGL3P40308 642 aa1.82□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 14.9 ms