RNA–Protein interactions for RNA: YBR006W

UGA2, Transcript of Succinate semialdehyde dehydrogenase, yeastyeast

Gene UGA2, Length 1,494 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UGA2YBR006W MTC1P47018 478 aaKnown RBP12.15□□□□□ -0.46
UGA2YBR006W DRS1P32892 752 aaKnown RBP12.02□□□□□ -0.48
UGA2YBR006W BFR2Q06631 534 aaKnown RBP10.31□□□□□ -0.76
UGA2YBR006W DIP2Q12220 943 aaPredicted RBP10.3□□□□□ -0.76
UGA2YBR006W FAP1P53971 965 aa10.22□□□□□ -0.77
UGA2YBR006W AVT3P36062 692 aa10.1□□□□□ -0.79
UGA2YBR006W ISW2Q08773 1120 aa9.91□□□□□ -0.82
UGA2YBR006W PRI1P10363 409 aa9.87□□□□□ -0.83
UGA2YBR006W RPG1P38249 964 aaKnown RBP9.82□□□□□ -0.84
UGA2YBR006W RSE1Q04693 1361 aaKnown RBP9.75□□□□□ -0.85
UGA2YBR006W AAD16Q02895 342 aa9.72□□□□□ -0.85
UGA2YBR006W PRY3P47033 881 aa9.58□□□□□ -0.88
UGA2YBR006W TFA1P36100 482 aa9.53□□□□□ -0.88
UGA2YBR006W RPL17AP05740 184 aaKnown RBP9.43□□□□□ -0.9
UGA2YBR006W RPL17BP46990 184 aaKnown RBP9.43□□□□□ -0.9
UGA2YBR006W TSR3Q12094 313 aaKnown RBP9.4□□□□□ -0.9
UGA2YBR006W REB1P21538 810 aa9.31□□□□□ -0.92
UGA2YBR006W YCK3P39962 524 aa9.09□□□□□ -0.95
UGA2YBR006W SPT21P35209 758 aa9.07□□□□□ -0.96
UGA2YBR006W MRPL32P25348 183 aa8.98□□□□□ -0.97
UGA2YBR006W HAA1Q12753 694 aaKnown RBP8.96□□□□□ -0.97
UGA2YBR006W SGS1P35187 1447 aa8.96□□□□□ -0.98
UGA2YBR006W RIM101P33400 625 aa8.88□□□□□ -0.99
UGA2YBR006W INO80P53115 1489 aa8.85□□□□□ -0.99
UGA2YBR006W YKR023WP36119 530 aaKnown RBP8.83□□□□□ -1
UGA2YBR006W TCB3Q03640 1545 aaKnown RBP8.78□□□□□ -1
UGA2YBR006W MON2P48563 1636 aaPredicted RBP8.76□□□□□ -1.01
UGA2YBR006W CDC27P38042 758 aa8.7□□□□□ -1.02
UGA2YBR006W TY1B-DR4Q07793 1604 aa8.69□□□□□ -1.02
UGA2YBR006W HOP09932 586 aa8.67□□□□□ -1.02
UGA2YBR006W DCD1P06773 312 aa8.64□□□□□ -1.03
UGA2YBR006W OXP1P28273 1286 aa8.64□□□□□ -1.03
UGA2YBR006W TFC8Q12308 588 aa8.63□□□□□ -1.03
UGA2YBR006W SWR1Q05471 1514 aa8.54□□□□□ -1.04
UGA2YBR006W SPA2P23201 1466 aaKnown RBP8.53□□□□□ -1.04
UGA2YBR006W SSN2P38931 1420 aa8.52□□□□□ -1.05
UGA2YBR006W HSL1P34244 1518 aa8.51□□□□□ -1.05
UGA2YBR006W PTP3P40048 928 aa8.5□□□□□ -1.05
UGA2YBR006W YAH1Q12184 172 aaKnown RBP8.5□□□□□ -1.05
UGA2YBR006W SPT6P23615 1451 aaKnown RBP8.47□□□□□ -1.05
UGA2YBR006W YIL055CP40523 627 aaKnown RBP8.47□□□□□ -1.05
UGA2YBR006W YGL015CP33199 130 aa8.4□□□□□ -1.06
UGA2YBR006W SSP1P38871 571 aa8.39□□□□□ -1.07
UGA2YBR006W BCH2P36122 765 aa8.38□□□□□ -1.07
UGA2YBR006W MAP2P38174 421 aaKnown RBP8.35□□□□□ -1.07
UGA2YBR006W YLR271WQ06152 274 aa8.35□□□□□ -1.07
UGA2YBR006W HIR3P47171 1648 aa8.34□□□□□ -1.07
UGA2YBR006W RSM7P47150 247 aa8.34□□□□□ -1.07
UGA2YBR006W DNA2P38859 1522 aa8.32□□□□□ -1.08
UGA2YBR006W SCY1P53009 804 aa8.3□□□□□ -1.08
UGA2YBR006W UBP10P53874 792 aaPredicted RBP8.3□□□□□ -1.08
UGA2YBR006W KOG1P38873 1557 aa8.29□□□□□ -1.08
UGA2YBR006W ARP8Q12386 881 aaKnown RBP RIP-Chip data8.25□□□□□ -1.09not detected
UGA2YBR006W XRN1P22147 1528 aaKnown RBP8.25□□□□□ -1.09
UGA2YBR006W AI2P03876 854 aa8.23□□□□□ -1.09
UGA2YBR006W EPS1P40557 701 aa8.23□□□□□ -1.09
UGA2YBR006W BDF1P35817 686 aa8.17□□□□□ -1.1
UGA2YBR006W BBC1P47068 1157 aa8.16□□□□□ -1.1
UGA2YBR006W REV3P14284 1504 aa8.14□□□□□ -1.11
UGA2YBR006W PSD2P53037 1138 aaKnown RBP8.13□□□□□ -1.11
UGA2YBR006W SLX5P32828 619 aaKnown RBP8.12□□□□□ -1.11
UGA2YBR006W THO2P53552 1597 aaKnown RBP8.11□□□□□ -1.11
UGA2YBR006W CST9Q06032 482 aa8.11□□□□□ -1.11
UGA2YBR006W SIN3P22579 1536 aa8.1□□□□□ -1.11
UGA2YBR006W MGA2P40578 1113 aa8.1□□□□□ -1.11
UGA2YBR006W BUD4P47136 1447 aa8.09□□□□□ -1.11
UGA2YBR006W ECM5Q03214 1411 aa8.04□□□□□ -1.12
UGA2YBR006W SSK2P53599 1579 aa8.04□□□□□ -1.12
UGA2YBR006W ATG2P53855 1592 aa8□□□□□ -1.13
UGA2YBR006W TAF2P23255 1407 aa8□□□□□ -1.13
UGA2YBR006W MRM1P25270 412 aa7.99□□□□□ -1.13
UGA2YBR006W RQC2Q12532 1038 aaKnown RBP7.97□□□□□ -1.13
UGA2YBR006W MDS3P53094 1487 aa7.97□□□□□ -1.13
UGA2YBR006W ESP1Q03018 1630 aa7.96□□□□□ -1.14
UGA2YBR006W PEP1P32319 1579 aa7.95□□□□□ -1.14
UGA2YBR006W TIF4632P39936 914 aaKnown RBP7.94□□□□□ -1.14
UGA2YBR006W MYO2P19524 1574 aaKnown RBP7.93□□□□□ -1.14
UGA2YBR006W TGL3P40308 642 aa7.9□□□□□ -1.14
UGA2YBR006W SKI3P17883 1432 aaKnown RBP7.9□□□□□ -1.15
UGA2YBR006W RCR1P38212 213 aa7.87□□□□□ -1.15
UGA2YBR006W YPK9Q12697 1472 aa7.86□□□□□ -1.15
UGA2YBR006W RTG3P38165 486 aa7.82□□□□□ -1.16
UGA2YBR006W DMA1P38823 416 aa7.81□□□□□ -1.16
UGA2YBR006W SCC2Q04002 1493 aa7.8□□□□□ -1.16
UGA2YBR006W VPS29P38759 282 aa7.78□□□□□ -1.16
UGA2YBR006W POL1P13382 1468 aa7.78□□□□□ -1.16
UGA2YBR006W RAM2P29703 316 aa7.77□□□□□ -1.17
UGA2YBR006W RPO31P04051 1460 aa7.76□□□□□ -1.17
UGA2YBR006W NSR1P27476 414 aaKnown RBP RIP-Chip data7.74□□□□□ -1.17not detected
UGA2YBR006W UFD4P33202 1483 aa7.73□□□□□ -1.17
UGA2YBR006W YAP5P40574 245 aa7.72□□□□□ -1.17
UGA2YBR006W STU1P38198 1513 aa7.72□□□□□ -1.17
UGA2YBR006W PIB1Q06651 286 aa7.71□□□□□ -1.18
UGA2YBR006W BPT1P14772 1559 aa7.7□□□□□ -1.18
UGA2YBR006W RKR1Q04781 1562 aa7.7□□□□□ -1.18
UGA2YBR006W YMR1P47147 688 aaKnown RBP RIP-Chip data7.7□□□□□ -1.18not detected
UGA2YBR006W YOR238WQ08634 303 aa7.7□□□□□ -1.18
UGA2YBR006W YCF1P39109 1515 aaKnown RBP7.7□□□□□ -1.18
UGA2YBR006W STS1P38637 319 aa7.69□□□□□ -1.18
UGA2YBR006W YFR006WP43590 535 aa7.69□□□□□ -1.18
Retrieved 100 of 5,963 RNA–protein pairs in 649.8 ms