RNA–Protein interactions for RNA: YBL056W

PTC3, Transcript of Type 2C protein phosphatase (PP2C), yeastyeast

Gene PTC3, Length 1,407 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTC3YBL056W MON2P48563 1636 aaPredicted RBP12.03□□□□□ -0.48
PTC3YBL056W SGS1P35187 1447 aa12.01□□□□□ -0.49
PTC3YBL056W INO80P53115 1489 aa11.99□□□□□ -0.49
PTC3YBL056W TCB3Q03640 1545 aaKnown RBP11.85□□□□□ -0.51
PTC3YBL056W TY1B-DR4Q07793 1604 aa11.75□□□□□ -0.53
PTC3YBL056W SWR1Q05471 1514 aa11.65□□□□□ -0.54
PTC3YBL056W DNA2P38859 1522 aa11.46□□□□□ -0.57
PTC3YBL056W HSL1P34244 1518 aa11.45□□□□□ -0.58
PTC3YBL056W SPT6P23615 1451 aaKnown RBP11.42□□□□□ -0.58
PTC3YBL056W DRS1P32892 752 aaKnown RBP11.38□□□□□ -0.59
PTC3YBL056W MTC1P47018 478 aaKnown RBP11.38□□□□□ -0.59
PTC3YBL056W KOG1P38873 1557 aa11.34□□□□□ -0.59
PTC3YBL056W SPA2P23201 1466 aaKnown RBP11.31□□□□□ -0.6
PTC3YBL056W SSN2P38931 1420 aa11.3□□□□□ -0.6
PTC3YBL056W HIR3P47171 1648 aa11.23□□□□□ -0.61
PTC3YBL056W XRN1P22147 1528 aaKnown RBP11.09□□□□□ -0.63
PTC3YBL056W ECM5Q03214 1411 aa10.99□□□□□ -0.65
PTC3YBL056W BUD4P47136 1447 aa10.97□□□□□ -0.65
PTC3YBL056W THO2P53552 1597 aaKnown RBP10.97□□□□□ -0.65
PTC3YBL056W REV3P14284 1504 aa10.92□□□□□ -0.66
PTC3YBL056W SIN3P22579 1536 aa10.82□□□□□ -0.68
PTC3YBL056W MDS3P53094 1487 aa10.8□□□□□ -0.68
PTC3YBL056W PEP1P32319 1579 aa10.78□□□□□ -0.68
PTC3YBL056W ATG2P53855 1592 aa10.78□□□□□ -0.68
PTC3YBL056W TAF2P23255 1407 aa10.78□□□□□ -0.68
PTC3YBL056W RSE1Q04693 1361 aaKnown RBP10.74□□□□□ -0.69
PTC3YBL056W SSK2P53599 1579 aa10.74□□□□□ -0.69
PTC3YBL056W SKI3P17883 1432 aaKnown RBP10.66□□□□□ -0.7
PTC3YBL056W ESP1Q03018 1630 aa10.64□□□□□ -0.71
PTC3YBL056W MYO2P19524 1574 aaKnown RBP10.55□□□□□ -0.72
PTC3YBL056W YPK9Q12697 1472 aa10.53□□□□□ -0.72
PTC3YBL056W SCC2Q04002 1493 aa10.48□□□□□ -0.73
PTC3YBL056W BPT1P14772 1559 aa10.47□□□□□ -0.73
PTC3YBL056W UFD4P33202 1483 aa10.45□□□□□ -0.74
PTC3YBL056W RPO31P04051 1460 aa10.43□□□□□ -0.74
PTC3YBL056W POL1P13382 1468 aa10.36□□□□□ -0.75
PTC3YBL056W YCF1P39109 1515 aaKnown RBP10.34□□□□□ -0.75
PTC3YBL056W TOP2P06786 1428 aaKnown RBP10.3□□□□□ -0.76
PTC3YBL056W STU1P38198 1513 aa10.29□□□□□ -0.76
PTC3YBL056W RKR1Q04781 1562 aa10.29□□□□□ -0.76
PTC3YBL056W TY2B-LR1P0C2J3 1770 aa10.28□□□□□ -0.76
PTC3YBL056W TY2B-FP0CX63 1770 aa10.28□□□□□ -0.76
PTC3YBL056W TY2B-GR2P0CX64 1770 aa10.28□□□□□ -0.76
PTC3YBL056W TY2B-CP25384 1770 aa10.28□□□□□ -0.76
PTC3YBL056W TY2B-DR2Q03494 1770 aa10.28□□□□□ -0.76
PTC3YBL056W TY1B-DR1Q03855 1755 aa10.28□□□□□ -0.76
PTC3YBL056W TY2B-DR3Q07791 1770 aaKnown RBP10.28□□□□□ -0.76
PTC3YBL056W TY2B-OR1Q12113 1770 aa10.28□□□□□ -0.76
PTC3YBL056W TY2B-DR1Q12472 1770 aa10.28□□□□□ -0.76
PTC3YBL056W TY2B-OR2Q12501 1770 aa10.28□□□□□ -0.76
PTC3YBL056W YOR1P53049 1477 aa10.24□□□□□ -0.77
PTC3YBL056W CHD1P32657 1468 aa10.23□□□□□ -0.77
PTC3YBL056W SMC4Q12267 1418 aa10.21□□□□□ -0.78
PTC3YBL056W CDC25P04821 1589 aa10.21□□□□□ -0.78
PTC3YBL056W TY1B-BRQ12193 1756 aa10.19□□□□□ -0.78
PTC3YBL056W TY1B-GR3Q12316 1755 aa10.19□□□□□ -0.78
PTC3YBL056W TY1B-ORQ92393 1755 aa10.19□□□□□ -0.78
PTC3YBL056W TY1B-DR3Q99231 1755 aa10.19□□□□□ -0.78
PTC3YBL056W TY2B-BQ12491 1770 aa10.17□□□□□ -0.78
PTC3YBL056W PAN1P32521 1480 aa10.15□□□□□ -0.79
PTC3YBL056W RQC2Q12532 1038 aaKnown RBP10.15□□□□□ -0.79
PTC3YBL056W TY1B-HO13535 1793 aa10.14□□□□□ -0.79
PTC3YBL056W TY1B-DR5P0C2I2 1755 aa10.14□□□□□ -0.79
PTC3YBL056W TY1B-DR6P0C2I3 1755 aa10.14□□□□□ -0.79
PTC3YBL056W TY1B-LR2P0C2I5 1755 aa10.14□□□□□ -0.79
PTC3YBL056W TY1B-LR3P0C2I6 1755 aaKnown RBP10.14□□□□□ -0.79
PTC3YBL056W TY1B-PR1P0C2I9 1755 aaKnown RBP10.14□□□□□ -0.79
PTC3YBL056W TY1B-PR2P0C2J0 1756 aa10.14□□□□□ -0.79
PTC3YBL056W TY1B-PR3P0C2J1 1755 aaKnown RBP10.14□□□□□ -0.79
PTC3YBL056W TY1B-JR1P47098 1755 aa10.14□□□□□ -0.79
PTC3YBL056W TY1B-ML2Q03434 1755 aaKnown RBP10.14□□□□□ -0.79
PTC3YBL056W TY1B-ER1Q03612 1755 aa10.14□□□□□ -0.79
PTC3YBL056W TY1B-ML1Q04711 1755 aaKnown RBP10.14□□□□□ -0.79
PTC3YBL056W TY1B-GR2Q12269 1755 aa10.14□□□□□ -0.79
PTC3YBL056W TY1B-OLQ12273 1755 aa10.14□□□□□ -0.79
PTC3YBL056W TY1B-PLQ12414 1755 aaKnown RBP10.14□□□□□ -0.79
PTC3YBL056W MMS22Q06164 1454 aa10.13□□□□□ -0.79
PTC3YBL056W YTA7P40340 1379 aa10.13□□□□□ -0.79
PTC3YBL056W DNF1P32660 1571 aa10.11□□□□□ -0.79
PTC3YBL056W SPP41P38904 1435 aa10.09□□□□□ -0.79
PTC3YBL056W MYO4P32492 1471 aa10.08□□□□□ -0.8
PTC3YBL056W ESC1Q03661 1658 aaKnown RBP10.07□□□□□ -0.8
PTC3YBL056W RPA190P10964 1664 aaKnown RBP10.03□□□□□ -0.8
PTC3YBL056W TSC11P40061 1430 aa10.01□□□□□ -0.81
PTC3YBL056W TRM732Q03496 1420 aa10□□□□□ -0.81
PTC3YBL056W VTH1P40438 1549 aa9.99□□□□□ -0.81
PTC3YBL056W VTH2P40890 1549 aa9.99□□□□□ -0.81
PTC3YBL056W MET5P47169 1442 aa9.99□□□□□ -0.81
PTC3YBL056W TY1B-JR2P47100 1755 aaKnown RBP9.95□□□□□ -0.82
PTC3YBL056W TY1B-ER2Q03619 1755 aa9.95□□□□□ -0.82
PTC3YBL056W TY1B-MR1Q04214 1755 aa9.95□□□□□ -0.82
PTC3YBL056W TY1B-MR2Q04670 1755 aaKnown RBP9.95□□□□□ -0.82
PTC3YBL056W TY1B-LR1Q12088 1755 aaKnown RBP9.95□□□□□ -0.82
PTC3YBL056W TY1B-NL1Q12112 1755 aa9.95□□□□□ -0.82
PTC3YBL056W TY1B-GR1Q12141 1755 aa9.95□□□□□ -0.82
PTC3YBL056W TY1B-BLQ12490 1755 aa9.95□□□□□ -0.82
PTC3YBL056W SNQ2P32568 1501 aaKnown RBP9.92□□□□□ -0.82
PTC3YBL056W NUP159P40477 1460 aa9.89□□□□□ -0.83
PTC3YBL056W SNT2P53127 1403 aa9.89□□□□□ -0.83
PTC3YBL056W STH1P32597 1359 aa9.88□□□□□ -0.83
Retrieved 100 of 5,963 RNA–protein pairs in 15.1 ms