RNA–Protein interactions for RNA: YAL063C

FLO9, Transcript of Lectin-like protein with similarity to Flo1p, yeast

Gene FLO9, Length 3,969 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FLO9	YAL063C	DRS1	P32892	752 aa	Known RBP	6.05	□□□□□ -1.44
FLO9	YAL063C	RQC2	Q12532	1038 aa	Known RBP	5.46	□□□□□ -1.54
FLO9	YAL063C	BFR2	Q06631	534 aa	Known RBP	5.42	□□□□□ -1.54
FLO9	YAL063C	INO80	P53115	1489 aa		5.27	□□□□□ -1.57
FLO9	YAL063C	MON2	P48563	1636 aa	Predicted RBP	5.17	□□□□□ -1.58
FLO9	YAL063C	MTC1	P47018	478 aa	Known RBP	5.17	□□□□□ -1.58
FLO9	YAL063C	RSE1	Q04693	1361 aa	Known RBP	4.99	□□□□□ -1.61
FLO9	YAL063C	DNA2	P38859	1522 aa		4.97	□□□□□ -1.61
FLO9	YAL063C	TAF7	Q05021	590 aa		4.96	□□□□□ -1.62
FLO9	YAL063C	TFA1	P36100	482 aa		4.94	□□□□□ -1.62
FLO9	YAL063C	URN1	Q06525	465 aa	Known RBP	4.89	□□□□□ -1.63
FLO9	YAL063C	KOG1	P38873	1557 aa		4.86	□□□□□ -1.63
FLO9	YAL063C	SWR1	Q05471	1514 aa		4.85	□□□□□ -1.63
FLO9	YAL063C	DIP2	Q12220	943 aa	Predicted RBP	4.83	□□□□□ -1.64
FLO9	YAL063C	NOP2	P40991	618 aa	Known RBP	4.81	□□□□□ -1.64
FLO9	YAL063C	EBP2	P36049	427 aa	Known RBP	4.8	□□□□□ -1.64
FLO9	YAL063C	PTP3	P40048	928 aa		4.78	□□□□□ -1.64
FLO9	YAL063C	CAB3	P36076	571 aa		4.78	□□□□□ -1.64
FLO9	YAL063C	DMA1	P38823	416 aa		4.75	□□□□□ -1.65
FLO9	YAL063C	SIS2	P36024	562 aa		4.74	□□□□□ -1.65
FLO9	YAL063C	TCB3	Q03640	1545 aa	Known RBP	4.72	□□□□□ -1.65
FLO9	YAL063C	TY1B-DR4	Q07793	1604 aa		4.66	□□□□□ -1.66
FLO9	YAL063C	SPA2	P23201	1466 aa	Known RBP	4.66	□□□□□ -1.66
FLO9	YAL063C	AVT3	P36062	692 aa		4.59	□□□□□ -1.67
FLO9	YAL063C	ECM5	Q03214	1411 aa		4.56	□□□□□ -1.68
FLO9	YAL063C	YFR016C	P43597	1233 aa	Known RBP	4.56	□□□□□ -1.68
FLO9	YAL063C	RPS0B	P46654	252 aa	Known RBP	4.55	□□□□□ -1.68
FLO9	YAL063C	YRB30	P53107	440 aa	Predicted RBP	4.55	□□□□□ -1.68
FLO9	YAL063C	SPT6	P23615	1451 aa	Known RBP	4.53	□□□□□ -1.68
FLO9	YAL063C	SGS1	P35187	1447 aa		4.53	□□□□□ -1.68
FLO9	YAL063C	YAH1	Q12184	172 aa	Known RBP	4.5	□□□□□ -1.69
FLO9	YAL063C	NSR1	P27476	414 aa	Known RBP RIP-Chip data	4.5	□□□□□ -1.69	not detected
FLO9	YAL063C	HSL1	P34244	1518 aa		4.49	□□□□□ -1.69
FLO9	YAL063C	BUD4	P47136	1447 aa		4.48	□□□□□ -1.69
FLO9	YAL063C	MIF2	P35201	549 aa		4.46	□□□□□ -1.7
FLO9	YAL063C	YPR148C	Q06523	435 aa		4.45	□□□□□ -1.7
FLO9	YAL063C	SKI3	P17883	1432 aa	Known RBP	4.44	□□□□□ -1.7
FLO9	YAL063C	KRI1	P42846	591 aa	Known RBP	4.43	□□□□□ -1.7
FLO9	YAL063C	MDS3	P53094	1487 aa		4.43	□□□□□ -1.7
FLO9	YAL063C	THO2	P53552	1597 aa	Known RBP	4.42	□□□□□ -1.7
FLO9	YAL063C	MNN4	P36044	1178 aa		4.42	□□□□□ -1.7
FLO9	YAL063C	REV3	P14284	1504 aa		4.41	□□□□□ -1.7
FLO9	YAL063C	NAP1	P25293	417 aa	Known RBP	4.4	□□□□□ -1.7
FLO9	YAL063C	TCB2	P48231	1178 aa		4.39	□□□□□ -1.71
FLO9	YAL063C	HIR3	P47171	1648 aa		4.38	□□□□□ -1.71
FLO9	YAL063C	RPL17A	P05740	184 aa	Known RBP	4.38	□□□□□ -1.71
FLO9	YAL063C	RPL17B	P46990	184 aa	Known RBP	4.38	□□□□□ -1.71
FLO9	YAL063C	AIM44	Q99299	758 aa		4.36	□□□□□ -1.71
FLO9	YAL063C	CWC22	P53333	577 aa	Known RBP	4.35	□□□□□ -1.71
FLO9	YAL063C	RLF2	Q12495	606 aa		4.34	□□□□□ -1.71
FLO9	YAL063C	BPT1	P14772	1559 aa		4.34	□□□□□ -1.71
FLO9	YAL063C	DEF1	P35732	738 aa	Known RBP	4.34	□□□□□ -1.71
FLO9	YAL063C	QCR6	P00127	147 aa		4.34	□□□□□ -1.72
FLO9	YAL063C	IOC4	Q04213	475 aa		4.32	□□□□□ -1.72
FLO9	YAL063C	FAP1	P53971	965 aa		4.31	□□□□□ -1.72
FLO9	YAL063C	PEP1	P32319	1579 aa		4.31	□□□□□ -1.72
FLO9	YAL063C	NOP53	Q12080	455 aa	Known RBP	4.31	□□□□□ -1.72
FLO9	YAL063C	XRN1	P22147	1528 aa	Known RBP	4.31	□□□□□ -1.72
FLO9	YAL063C	NUG1	P40010	520 aa	Known RBP	4.3	□□□□□ -1.72
FLO9	YAL063C	YFR006W	P43590	535 aa		4.29	□□□□□ -1.72
FLO9	YAL063C	TAF2	P23255	1407 aa		4.28	□□□□□ -1.72
FLO9	YAL063C	RPG1	P38249	964 aa	Known RBP	4.27	□□□□□ -1.73
FLO9	YAL063C	RIX1	P38883	763 aa	Predicted RBP	4.27	□□□□□ -1.73
FLO9	YAL063C	PLP2	Q12017	286 aa		4.27	□□□□□ -1.73
FLO9	YAL063C	HSP82	P02829	709 aa	Known RBP	4.26	□□□□□ -1.73
FLO9	YAL063C	REB1	P21538	810 aa		4.26	□□□□□ -1.73
FLO9	YAL063C	YCF1	P39109	1515 aa	Known RBP	4.26	□□□□□ -1.73
FLO9	YAL063C	ABP1	P15891	592 aa	Known RBP	4.25	□□□□□ -1.73
FLO9	YAL063C	ENV11	P53246	860 aa		4.25	□□□□□ -1.73
FLO9	YAL063C	ENP1	P38333	483 aa	Known RBP	4.24	□□□□□ -1.73
FLO9	YAL063C	ATG2	P53855	1592 aa		4.24	□□□□□ -1.73
FLO9	YAL063C	FPR3	P38911	411 aa	Known RBP	4.24	□□□□□ -1.73
FLO9	YAL063C	PSH1	Q12161	406 aa		4.24	□□□□□ -1.73
FLO9	YAL063C	LEO1	P38439	464 aa		4.23	□□□□□ -1.73
FLO9	YAL063C	SPT7	P35177	1332 aa		4.23	□□□□□ -1.73
FLO9	YAL063C	DCD1	P06773	312 aa		4.22	□□□□□ -1.73
FLO9	YAL063C	SPT2	P06843	333 aa	Predicted RBP	4.22	□□□□□ -1.73
FLO9	YAL063C	YGR130C	P53278	816 aa		4.22	□□□□□ -1.73
FLO9	YAL063C	TOP1	P04786	769 aa		4.22	□□□□□ -1.73
FLO9	YAL063C	SNU71	P53207	620 aa	Known RBP	4.21	□□□□□ -1.74
FLO9	YAL063C	FUN12	P39730	1002 aa	Known RBP	4.21	□□□□□ -1.74
FLO9	YAL063C	RNA1	P11745	407 aa	Known RBP	4.2	□□□□□ -1.74
FLO9	YAL063C	CLC1	P17891	233 aa		4.2	□□□□□ -1.74
FLO9	YAL063C	FPR4	Q06205	392 aa	Predicted RBP	4.2	□□□□□ -1.74
FLO9	YAL063C	LTE1	P07866	1435 aa		4.19	□□□□□ -1.74
FLO9	YAL063C	DMA2	P53924	522 aa		4.19	□□□□□ -1.74
FLO9	YAL063C	MET5	P47169	1442 aa		4.19	□□□□□ -1.74
FLO9	YAL063C	SEC3	P33332	1336 aa	Known RBP	4.19	□□□□□ -1.74
FLO9	YAL063C	YTA7	P40340	1379 aa		4.18	□□□□□ -1.74
FLO9	YAL063C	RLP24	Q07915	199 aa	Known RBP	4.18	□□□□□ -1.74
FLO9	YAL063C	RPN1	P38764	993 aa	Known RBP	4.17	□□□□□ -1.74
FLO9	YAL063C	ITT1	Q04638	464 aa		4.17	□□□□□ -1.74
FLO9	YAL063C	SAS10	Q12136	610 aa	Predicted RBP	4.17	□□□□□ -1.74
FLO9	YAL063C	RPS0A	P32905	252 aa	Known RBP	4.16	□□□□□ -1.74
FLO9	YAL063C	UFD4	P33202	1483 aa		4.16	□□□□□ -1.74
FLO9	YAL063C	SPC110	P32380	944 aa		4.15	□□□□□ -1.74
FLO9	YAL063C	SSK2	P53599	1579 aa		4.15	□□□□□ -1.74
FLO9	YAL063C	NMD2	P38798	1089 aa	Known RBP	4.15	□□□□□ -1.74
FLO9	YAL063C	PIL1	P53252	339 aa	Known RBP	4.15	□□□□□ -1.74
FLO9	YAL063C	MYO2	P19524	1574 aa	Known RBP	4.15	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms