RNA–Protein interactions for RNA: YAL062W

GDH3, Transcript of NADP(+)-dependent glutamate dehydrogenase, yeastyeast

Gene GDH3, Length 1,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GDH3YAL062W SGS1P35187 1447 aa19.22■□□□□ 0.67
GDH3YAL062W INO80P53115 1489 aa18.92■□□□□ 0.62
GDH3YAL062W MON2P48563 1636 aaPredicted RBP18.8■□□□□ 0.6
GDH3YAL062W TCB3Q03640 1545 aaKnown RBP18.79■□□□□ 0.6
GDH3YAL062W TY1B-DR4Q07793 1604 aa18.55■□□□□ 0.56
GDH3YAL062W SWR1Q05471 1514 aa18.31■□□□□ 0.52
GDH3YAL062W SSN2P38931 1420 aa18.14■□□□□ 0.5
GDH3YAL062W HSL1P34244 1518 aa18.13■□□□□ 0.49
GDH3YAL062W SPT6P23615 1451 aaKnown RBP18.1■□□□□ 0.49
GDH3YAL062W SPA2P23201 1466 aaKnown RBP18.09■□□□□ 0.49
GDH3YAL062W DNA2P38859 1522 aa17.93■□□□□ 0.46
GDH3YAL062W HIR3P47171 1648 aa17.8■□□□□ 0.44
GDH3YAL062W KOG1P38873 1557 aa17.8■□□□□ 0.44
GDH3YAL062W DRS1P32892 752 aaKnown RBP17.64■□□□□ 0.41
GDH3YAL062W XRN1P22147 1528 aaKnown RBP17.63■□□□□ 0.41
GDH3YAL062W ECM5Q03214 1411 aa17.36■□□□□ 0.37
GDH3YAL062W REV3P14284 1504 aa17.35■□□□□ 0.37
GDH3YAL062W THO2P53552 1597 aaKnown RBP17.33■□□□□ 0.36
GDH3YAL062W BUD4P47136 1447 aa17.32■□□□□ 0.36
GDH3YAL062W SIN3P22579 1536 aa17.22■□□□□ 0.35
GDH3YAL062W TAF2P23255 1407 aa17.14■□□□□ 0.33
GDH3YAL062W SSK2P53599 1579 aa17.08■□□□□ 0.33
GDH3YAL062W ATG2P53855 1592 aa17.04■□□□□ 0.32
GDH3YAL062W MDS3P53094 1487 aa17.02■□□□□ 0.32
GDH3YAL062W PEP1P32319 1579 aa16.99■□□□□ 0.31
GDH3YAL062W ESP1Q03018 1630 aa16.95■□□□□ 0.3
GDH3YAL062W SKI3P17883 1432 aaKnown RBP16.94■□□□□ 0.3
GDH3YAL062W MYO2P19524 1574 aaKnown RBP16.83■□□□□ 0.28
GDH3YAL062W YPK9Q12697 1472 aa16.78■□□□□ 0.28
GDH3YAL062W RSE1Q04693 1361 aaKnown RBP16.75■□□□□ 0.27
GDH3YAL062W SCC2Q04002 1493 aa16.64■□□□□ 0.25
GDH3YAL062W RPO31P04051 1460 aa16.59■□□□□ 0.25
GDH3YAL062W POL1P13382 1468 aa16.58■□□□□ 0.24
GDH3YAL062W UFD4P33202 1483 aa16.58■□□□□ 0.24
GDH3YAL062W BPT1P14772 1559 aa16.51■□□□□ 0.23
GDH3YAL062W STU1P38198 1513 aa16.46■□□□□ 0.23
GDH3YAL062W TOP2P06786 1428 aaKnown RBP16.44■□□□□ 0.22
GDH3YAL062W YCF1P39109 1515 aaKnown RBP16.42■□□□□ 0.22
GDH3YAL062W RKR1Q04781 1562 aa16.41■□□□□ 0.22
GDH3YAL062W YOR1P53049 1477 aa16.36■□□□□ 0.21
GDH3YAL062W YTA7P40340 1379 aa16.34■□□□□ 0.21
GDH3YAL062W SMC4Q12267 1418 aa16.31■□□□□ 0.2
GDH3YAL062W MTC1P47018 478 aaKnown RBP16.31■□□□□ 0.2
GDH3YAL062W TY2B-LR1P0C2J3 1770 aa16.31■□□□□ 0.2
GDH3YAL062W TY2B-FP0CX63 1770 aa16.31■□□□□ 0.2
GDH3YAL062W TY2B-GR2P0CX64 1770 aa16.31■□□□□ 0.2
GDH3YAL062W TY2B-CP25384 1770 aa16.31■□□□□ 0.2
GDH3YAL062W TY2B-DR2Q03494 1770 aa16.31■□□□□ 0.2
GDH3YAL062W TY1B-DR1Q03855 1755 aa16.31■□□□□ 0.2
GDH3YAL062W TY2B-DR3Q07791 1770 aaKnown RBP16.31■□□□□ 0.2
GDH3YAL062W TY2B-OR1Q12113 1770 aa16.31■□□□□ 0.2
GDH3YAL062W TY2B-DR1Q12472 1770 aa16.31■□□□□ 0.2
GDH3YAL062W TY2B-OR2Q12501 1770 aa16.31■□□□□ 0.2
GDH3YAL062W CHD1P32657 1468 aa16.2■□□□□ 0.18
GDH3YAL062W TY1B-DR3Q99231 1755 aa16.18■□□□□ 0.18
GDH3YAL062W RQC2Q12532 1038 aaKnown RBP16.16■□□□□ 0.18
GDH3YAL062W MYO4P32492 1471 aa16.15■□□□□ 0.18
GDH3YAL062W TY2B-BQ12491 1770 aa16.15■□□□□ 0.18
GDH3YAL062W CDC25P04821 1589 aa16.14■□□□□ 0.17
GDH3YAL062W TY1B-BRQ12193 1756 aa16.13■□□□□ 0.17
GDH3YAL062W TY1B-GR3Q12316 1755 aa16.13■□□□□ 0.17
GDH3YAL062W TY1B-ORQ92393 1755 aa16.13■□□□□ 0.17
GDH3YAL062W MMS22Q06164 1454 aa16.11■□□□□ 0.17
GDH3YAL062W PAN1P32521 1480 aa16.09■□□□□ 0.17
GDH3YAL062W TY1B-HO13535 1793 aa16.07■□□□□ 0.16
GDH3YAL062W TY1B-DR5P0C2I2 1755 aa16.07■□□□□ 0.16
GDH3YAL062W TY1B-DR6P0C2I3 1755 aa16.07■□□□□ 0.16
GDH3YAL062W TY1B-LR2P0C2I5 1755 aa16.07■□□□□ 0.16
GDH3YAL062W TY1B-LR3P0C2I6 1755 aaKnown RBP16.07■□□□□ 0.16
GDH3YAL062W TY1B-PR1P0C2I9 1755 aaKnown RBP16.07■□□□□ 0.16
GDH3YAL062W TY1B-PR2P0C2J0 1756 aa16.07■□□□□ 0.16
GDH3YAL062W TY1B-PR3P0C2J1 1755 aaKnown RBP16.07■□□□□ 0.16
GDH3YAL062W TY1B-JR1P47098 1755 aa16.07■□□□□ 0.16
GDH3YAL062W TY1B-ML2Q03434 1755 aaKnown RBP16.07■□□□□ 0.16
GDH3YAL062W TY1B-ER1Q03612 1755 aa16.07■□□□□ 0.16
GDH3YAL062W TY1B-ML1Q04711 1755 aaKnown RBP16.07■□□□□ 0.16
GDH3YAL062W TY1B-GR2Q12269 1755 aa16.07■□□□□ 0.16
GDH3YAL062W TY1B-OLQ12273 1755 aa16.07■□□□□ 0.16
GDH3YAL062W TY1B-PLQ12414 1755 aaKnown RBP16.07■□□□□ 0.16
GDH3YAL062W SPP41P38904 1435 aa16.06■□□□□ 0.16
GDH3YAL062W SAS10Q12136 610 aaPredicted RBP15.98■□□□□ 0.15
GDH3YAL062W TSC11P40061 1430 aa15.95■□□□□ 0.14
GDH3YAL062W DNF1P32660 1571 aa15.94■□□□□ 0.14
GDH3YAL062W TAF7Q05021 590 aa15.9■□□□□ 0.14
GDH3YAL062W SNQ2P32568 1501 aaKnown RBP15.9■□□□□ 0.14
GDH3YAL062W STH1P32597 1359 aa15.9■□□□□ 0.14
GDH3YAL062W ESC1Q03661 1658 aaKnown RBP15.9■□□□□ 0.14
GDH3YAL062W VTH1P40438 1549 aa15.89■□□□□ 0.13
GDH3YAL062W VTH2P40890 1549 aa15.89■□□□□ 0.13
GDH3YAL062W TRM732Q03496 1420 aa15.89■□□□□ 0.13
GDH3YAL062W RPA190P10964 1664 aaKnown RBP15.84■□□□□ 0.13
GDH3YAL062W SNT2P53127 1403 aa15.79■□□□□ 0.12
GDH3YAL062W TY1B-JR2P47100 1755 aaKnown RBP15.79■□□□□ 0.12
GDH3YAL062W TY1B-ER2Q03619 1755 aa15.79■□□□□ 0.12
GDH3YAL062W TY1B-MR1Q04214 1755 aa15.79■□□□□ 0.12
GDH3YAL062W TY1B-MR2Q04670 1755 aaKnown RBP15.79■□□□□ 0.12
GDH3YAL062W TY1B-LR1Q12088 1755 aaKnown RBP15.79■□□□□ 0.12
GDH3YAL062W TY1B-NL1Q12112 1755 aa15.79■□□□□ 0.12
GDH3YAL062W TY1B-GR1Q12141 1755 aa15.79■□□□□ 0.12
GDH3YAL062W TY1B-BLQ12490 1755 aa15.79■□□□□ 0.12
Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms