RNA–Protein interactions for RNA: YAL005C

SSA1, Transcript of ATPase involved in protein folding and NLS-directed nuclear transport, yeastyeast

Gene SSA1, Length 1,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSA1YAL005C SGS1P35187 1447 aa25.17■■□□□ 1.62
SSA1YAL005C MON2P48563 1636 aaPredicted RBP25.14■■□□□ 1.61
SSA1YAL005C INO80P53115 1489 aa25.05■■□□□ 1.6
SSA1YAL005C TCB3Q03640 1545 aaKnown RBP24.79■■□□□ 1.56
SSA1YAL005C TY1B-DR4Q07793 1604 aa24.62■■□□□ 1.53
SSA1YAL005C SWR1Q05471 1514 aa24.37■■□□□ 1.49
SSA1YAL005C HSL1P34244 1518 aa24.01■■□□□ 1.43
SSA1YAL005C DNA2P38859 1522 aa23.94■■□□□ 1.42
SSA1YAL005C SPT6P23615 1451 aaKnown RBP23.93■■□□□ 1.42
SSA1YAL005C SPA2P23201 1466 aaKnown RBP23.72■■□□□ 1.39
SSA1YAL005C SSN2P38931 1420 aa23.7■■□□□ 1.39
SSA1YAL005C KOG1P38873 1557 aa23.7■■□□□ 1.38
SSA1YAL005C HIR3P47171 1648 aa23.54■■□□□ 1.36
SSA1YAL005C XRN1P22147 1528 aaKnown RBP23.26■■□□□ 1.31
SSA1YAL005C ECM5Q03214 1411 aa22.99■■□□□ 1.27
SSA1YAL005C THO2P53552 1597 aaKnown RBP22.94■■□□□ 1.26
SSA1YAL005C BUD4P47136 1447 aa22.94■■□□□ 1.26
SSA1YAL005C DRS1P32892 752 aaKnown RBP22.91■■□□□ 1.26
SSA1YAL005C REV3P14284 1504 aa22.9■■□□□ 1.26
SSA1YAL005C SIN3P22579 1536 aa22.68■■□□□ 1.22
SSA1YAL005C TAF2P23255 1407 aa22.63■■□□□ 1.21
SSA1YAL005C MDS3P53094 1487 aa22.62■■□□□ 1.21
SSA1YAL005C ATG2P53855 1592 aa22.6■■□□□ 1.21
SSA1YAL005C PEP1P32319 1579 aa22.55■■□□□ 1.2
SSA1YAL005C SSK2P53599 1579 aa22.54■■□□□ 1.2
SSA1YAL005C RSE1Q04693 1361 aaKnown RBP22.42■■□□□ 1.18
SSA1YAL005C ESP1Q03018 1630 aa22.38■■□□□ 1.17
SSA1YAL005C SKI3P17883 1432 aaKnown RBP22.37■■□□□ 1.17
SSA1YAL005C MYO2P19524 1574 aaKnown RBP22.15■■□□□ 1.14
SSA1YAL005C YPK9Q12697 1472 aa22.07■■□□□ 1.12
SSA1YAL005C SCC2Q04002 1493 aa21.96■■□□□ 1.11
SSA1YAL005C BPT1P14772 1559 aa21.92■■□□□ 1.1
SSA1YAL005C UFD4P33202 1483 aa21.89■■□□□ 1.1
SSA1YAL005C RPO31P04051 1460 aa21.83■■□□□ 1.09
SSA1YAL005C MTC1P47018 478 aaKnown RBP21.75■■□□□ 1.07
SSA1YAL005C POL1P13382 1468 aa21.72■■□□□ 1.07
SSA1YAL005C YCF1P39109 1515 aaKnown RBP21.66■■□□□ 1.06
SSA1YAL005C TY2B-LR1P0C2J3 1770 aa21.65■■□□□ 1.06
SSA1YAL005C TY2B-FP0CX63 1770 aa21.65■■□□□ 1.06
SSA1YAL005C TY2B-GR2P0CX64 1770 aa21.65■■□□□ 1.06
SSA1YAL005C TY2B-CP25384 1770 aa21.65■■□□□ 1.06
SSA1YAL005C TY2B-DR2Q03494 1770 aa21.65■■□□□ 1.06
SSA1YAL005C TY1B-DR1Q03855 1755 aa21.65■■□□□ 1.06
SSA1YAL005C TY2B-DR3Q07791 1770 aaKnown RBP21.65■■□□□ 1.06
SSA1YAL005C TY2B-OR1Q12113 1770 aa21.65■■□□□ 1.06
SSA1YAL005C TY2B-DR1Q12472 1770 aa21.65■■□□□ 1.06
SSA1YAL005C TY2B-OR2Q12501 1770 aa21.65■■□□□ 1.06
SSA1YAL005C RKR1Q04781 1562 aa21.61■■□□□ 1.05
SSA1YAL005C STU1P38198 1513 aa21.6■■□□□ 1.05
SSA1YAL005C TOP2P06786 1428 aaKnown RBP21.59■■□□□ 1.05
SSA1YAL005C YOR1P53049 1477 aa21.46■■□□□ 1.03
SSA1YAL005C TY1B-DR3Q99231 1755 aa21.45■■□□□ 1.02
SSA1YAL005C TY1B-BRQ12193 1756 aa21.42■■□□□ 1.02
SSA1YAL005C TY1B-GR3Q12316 1755 aa21.42■■□□□ 1.02
SSA1YAL005C TY2B-BQ12491 1770 aa21.42■■□□□ 1.02
SSA1YAL005C TY1B-ORQ92393 1755 aa21.42■■□□□ 1.02
SSA1YAL005C CHD1P32657 1468 aa21.4■■□□□ 1.02
SSA1YAL005C CDC25P04821 1589 aa21.39■■□□□ 1.02
SSA1YAL005C SMC4Q12267 1418 aa21.38■■□□□ 1.01
SSA1YAL005C RQC2Q12532 1038 aaKnown RBP21.33■■□□□ 1
SSA1YAL005C TY1B-HO13535 1793 aa21.31■■□□□ 1
SSA1YAL005C TY1B-DR5P0C2I2 1755 aa21.31■■□□□ 1
SSA1YAL005C TY1B-DR6P0C2I3 1755 aa21.31■■□□□ 1
SSA1YAL005C TY1B-LR2P0C2I5 1755 aa21.31■■□□□ 1
SSA1YAL005C TY1B-LR3P0C2I6 1755 aaKnown RBP21.31■■□□□ 1
SSA1YAL005C TY1B-PR1P0C2I9 1755 aaKnown RBP21.31■■□□□ 1
SSA1YAL005C TY1B-PR2P0C2J0 1756 aa21.31■■□□□ 1
SSA1YAL005C TY1B-PR3P0C2J1 1755 aaKnown RBP21.31■■□□□ 1
SSA1YAL005C TY1B-JR1P47098 1755 aa21.31■■□□□ 1
SSA1YAL005C TY1B-ML2Q03434 1755 aaKnown RBP21.31■■□□□ 1
SSA1YAL005C TY1B-ER1Q03612 1755 aa21.31■■□□□ 1
SSA1YAL005C TY1B-ML1Q04711 1755 aaKnown RBP21.31■■□□□ 1
SSA1YAL005C TY1B-GR2Q12269 1755 aa21.31■■□□□ 1
SSA1YAL005C TY1B-OLQ12273 1755 aa21.31■■□□□ 1
SSA1YAL005C TY1B-PLQ12414 1755 aaKnown RBP21.31■■□□□ 1
SSA1YAL005C PAN1P32521 1480 aa21.24■□□□□ 0.99
SSA1YAL005C YTA7P40340 1379 aa21.24■□□□□ 0.99
SSA1YAL005C MMS22Q06164 1454 aa21.22■□□□□ 0.99
SSA1YAL005C DNF1P32660 1571 aa21.19■□□□□ 0.98
SSA1YAL005C ESC1Q03661 1658 aaKnown RBP21.18■□□□□ 0.98
SSA1YAL005C SPP41P38904 1435 aa21.13■□□□□ 0.97
SSA1YAL005C MYO4P32492 1471 aa21.11■□□□□ 0.97
SSA1YAL005C RPA190P10964 1664 aaKnown RBP21.04■□□□□ 0.96
SSA1YAL005C TSC11P40061 1430 aa20.97■□□□□ 0.95
SSA1YAL005C VTH1P40438 1549 aa20.96■□□□□ 0.95
SSA1YAL005C VTH2P40890 1549 aa20.96■□□□□ 0.95
SSA1YAL005C TRM732Q03496 1420 aa20.94■□□□□ 0.94
SSA1YAL005C TY1B-JR2P47100 1755 aaKnown RBP20.93■□□□□ 0.94
SSA1YAL005C TY1B-ER2Q03619 1755 aa20.93■□□□□ 0.94
SSA1YAL005C TY1B-MR1Q04214 1755 aa20.93■□□□□ 0.94
SSA1YAL005C TY1B-MR2Q04670 1755 aaKnown RBP20.93■□□□□ 0.94
SSA1YAL005C TY1B-LR1Q12088 1755 aaKnown RBP20.93■□□□□ 0.94
SSA1YAL005C TY1B-NL1Q12112 1755 aa20.93■□□□□ 0.94
SSA1YAL005C TY1B-GR1Q12141 1755 aa20.93■□□□□ 0.94
SSA1YAL005C TY1B-BLQ12490 1755 aa20.93■□□□□ 0.94
SSA1YAL005C MET5P47169 1442 aa20.85■□□□□ 0.93
SSA1YAL005C SNQ2P32568 1501 aaKnown RBP20.84■□□□□ 0.93
SSA1YAL005C SAS10Q12136 610 aaPredicted RBP20.82■□□□□ 0.92
SSA1YAL005C NTE1Q04958 1679 aa20.77■□□□□ 0.91
SSA1YAL005C STH1P32597 1359 aa20.75■□□□□ 0.91
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms