RNA–Protein interactions for RNA: SCR1

SCR1, Transcript of RNA subunit of the Signal Recognition Particle (SRP), yeastyeast

Gene SCR1, Length 522 nt, Biotype ncRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCR1SCR1 MON2P48563 1636 aaPredicted RBP29.27■■■□□ 2.28
SCR1SCR1 INO80P53115 1489 aa29.24■■■□□ 2.27
SCR1SCR1 TCB3Q03640 1545 aaKnown RBP28.38■■■□□ 2.13
SCR1SCR1 SGS1P35187 1447 aa28.29■■■□□ 2.12
SCR1SCR1 TY1B-DR4Q07793 1604 aa28.1■■■□□ 2.09
SCR1SCR1 SWR1Q05471 1514 aa28.09■■■□□ 2.09
SCR1SCR1 DNA2P38859 1522 aa27.84■■■□□ 2.05
SCR1SCR1 KOG1P38873 1557 aa27.62■■■□□ 2.01
SCR1SCR1 HSL1P34244 1518 aa27.27■■□□□ 1.96
SCR1SCR1 SPT6P23615 1451 aaKnown RBP27.25■■□□□ 1.95
SCR1SCR1 SPA2P23201 1466 aaKnown RBP27.08■■□□□ 1.93
SCR1SCR1 HIR3P47171 1648 aa26.72■■□□□ 1.87
SCR1SCR1 RSE1Q04693 1361 aaKnown RBP26.56■■□□□ 1.84
SCR1SCR1 ECM5Q03214 1411 aa26.42■■□□□ 1.82
SCR1SCR1 THO2P53552 1597 aaKnown RBP26.37■■□□□ 1.81
SCR1SCR1 BUD4P47136 1447 aa26.34■■□□□ 1.81
SCR1SCR1 XRN1P22147 1528 aaKnown RBP26.32■■□□□ 1.8
SCR1SCR1 SSN2P38931 1420 aa26.31■■□□□ 1.8
SCR1SCR1 MDS3P53094 1487 aa25.98■■□□□ 1.75
SCR1SCR1 REV3P14284 1504 aa25.87■■□□□ 1.73
SCR1SCR1 PEP1P32319 1579 aa25.77■■□□□ 1.72
SCR1SCR1 ATG2P53855 1592 aa25.72■■□□□ 1.71
SCR1SCR1 SIN3P22579 1536 aa25.63■■□□□ 1.69
SCR1SCR1 DRS1P32892 752 aaKnown RBP25.54■■□□□ 1.68
SCR1SCR1 TAF2P23255 1407 aa25.51■■□□□ 1.67
SCR1SCR1 MTC1P47018 478 aaKnown RBP25.49■■□□□ 1.67
SCR1SCR1 SKI3P17883 1432 aaKnown RBP25.43■■□□□ 1.66
SCR1SCR1 SSK2P53599 1579 aa25.4■■□□□ 1.66
SCR1SCR1 BPT1P14772 1559 aa25.29■■□□□ 1.64
SCR1SCR1 ESP1Q03018 1630 aa25.26■■□□□ 1.63
SCR1SCR1 MYO2P19524 1574 aaKnown RBP25.05■■□□□ 1.6
SCR1SCR1 YPK9Q12697 1472 aa24.98■■□□□ 1.59
SCR1SCR1 UFD4P33202 1483 aa24.93■■□□□ 1.58
SCR1SCR1 YCF1P39109 1515 aaKnown RBP24.87■■□□□ 1.57
SCR1SCR1 SCC2Q04002 1493 aa24.86■■□□□ 1.57
SCR1SCR1 RPO31P04051 1460 aa24.75■■□□□ 1.55
SCR1SCR1 CHD1P32657 1468 aa24.47■■□□□ 1.51
SCR1SCR1 TY2B-LR1P0C2J3 1770 aa24.47■■□□□ 1.51
SCR1SCR1 TY2B-FP0CX63 1770 aa24.47■■□□□ 1.51
SCR1SCR1 TY2B-GR2P0CX64 1770 aa24.47■■□□□ 1.51
SCR1SCR1 TY2B-CP25384 1770 aa24.47■■□□□ 1.51
SCR1SCR1 TY2B-DR2Q03494 1770 aa24.47■■□□□ 1.51
SCR1SCR1 TY1B-DR1Q03855 1755 aa24.47■■□□□ 1.51
SCR1SCR1 TY2B-DR3Q07791 1770 aaKnown RBP24.47■■□□□ 1.51
SCR1SCR1 TY2B-OR1Q12113 1770 aa24.47■■□□□ 1.51
SCR1SCR1 TY2B-DR1Q12472 1770 aa24.47■■□□□ 1.51
SCR1SCR1 TY2B-OR2Q12501 1770 aa24.47■■□□□ 1.51
SCR1SCR1 CDC25P04821 1589 aa24.46■■□□□ 1.51
SCR1SCR1 TOP2P06786 1428 aaKnown RBP24.44■■□□□ 1.5
SCR1SCR1 POL1P13382 1468 aa24.37■■□□□ 1.49
SCR1SCR1 RQC2Q12532 1038 aaKnown RBP24.35■■□□□ 1.49
SCR1SCR1 RKR1Q04781 1562 aa24.33■■□□□ 1.49
SCR1SCR1 TY1B-BRQ12193 1756 aa24.29■■□□□ 1.48
SCR1SCR1 TY1B-GR3Q12316 1755 aa24.29■■□□□ 1.48
SCR1SCR1 TY1B-ORQ92393 1755 aa24.29■■□□□ 1.48
SCR1SCR1 PAN1P32521 1480 aa24.27■■□□□ 1.48
SCR1SCR1 ESC1Q03661 1658 aaKnown RBP24.26■■□□□ 1.47
SCR1SCR1 DNF1P32660 1571 aa24.2■■□□□ 1.46
SCR1SCR1 TY2B-BQ12491 1770 aa24.19■■□□□ 1.46
SCR1SCR1 MET5P47169 1442 aa24.18■■□□□ 1.46
SCR1SCR1 TY1B-DR3Q99231 1755 aa24.16■■□□□ 1.46
SCR1SCR1 STU1P38198 1513 aa24.15■■□□□ 1.46
SCR1SCR1 SMC4Q12267 1418 aa24.13■■□□□ 1.45
SCR1SCR1 TY1B-HO13535 1793 aa24.13■■□□□ 1.45
SCR1SCR1 TY1B-DR5P0C2I2 1755 aa24.13■■□□□ 1.45
SCR1SCR1 TY1B-DR6P0C2I3 1755 aa24.13■■□□□ 1.45
SCR1SCR1 TY1B-LR2P0C2I5 1755 aa24.13■■□□□ 1.45
SCR1SCR1 TY1B-LR3P0C2I6 1755 aaKnown RBP24.13■■□□□ 1.45
SCR1SCR1 TY1B-PR1P0C2I9 1755 aaKnown RBP24.13■■□□□ 1.45
SCR1SCR1 TY1B-PR2P0C2J0 1756 aa24.13■■□□□ 1.45
SCR1SCR1 TY1B-PR3P0C2J1 1755 aaKnown RBP24.13■■□□□ 1.45
SCR1SCR1 TY1B-JR1P47098 1755 aa24.13■■□□□ 1.45
SCR1SCR1 TY1B-ML2Q03434 1755 aaKnown RBP24.13■■□□□ 1.45
SCR1SCR1 TY1B-ER1Q03612 1755 aa24.13■■□□□ 1.45
SCR1SCR1 TY1B-ML1Q04711 1755 aaKnown RBP24.13■■□□□ 1.45
SCR1SCR1 TY1B-GR2Q12269 1755 aa24.13■■□□□ 1.45
SCR1SCR1 TY1B-OLQ12273 1755 aa24.13■■□□□ 1.45
SCR1SCR1 TY1B-PLQ12414 1755 aaKnown RBP24.13■■□□□ 1.45
SCR1SCR1 YOR1P53049 1477 aa24.13■■□□□ 1.45
SCR1SCR1 MMS22Q06164 1454 aa24.13■■□□□ 1.45
SCR1SCR1 RPA190P10964 1664 aaKnown RBP24.02■■□□□ 1.44
SCR1SCR1 TRM732Q03496 1420 aa23.96■■□□□ 1.43
SCR1SCR1 SPP41P38904 1435 aa23.93■■□□□ 1.42
SCR1SCR1 LTE1P07866 1435 aa23.85■■□□□ 1.41
SCR1SCR1 YTA7P40340 1379 aa23.8■■□□□ 1.4
SCR1SCR1 TSC11P40061 1430 aa23.76■■□□□ 1.39
SCR1SCR1 VTH1P40438 1549 aa23.71■■□□□ 1.39
SCR1SCR1 VTH2P40890 1549 aa23.71■■□□□ 1.39
SCR1SCR1 MYO4P32492 1471 aa23.7■■□□□ 1.38
SCR1SCR1 TY1B-JR2P47100 1755 aaKnown RBP23.67■■□□□ 1.38
SCR1SCR1 TY1B-ER2Q03619 1755 aa23.67■■□□□ 1.38
SCR1SCR1 TY1B-MR1Q04214 1755 aa23.67■■□□□ 1.38
SCR1SCR1 TY1B-MR2Q04670 1755 aaKnown RBP23.67■■□□□ 1.38
SCR1SCR1 TY1B-LR1Q12088 1755 aaKnown RBP23.67■■□□□ 1.38
SCR1SCR1 TY1B-NL1Q12112 1755 aa23.67■■□□□ 1.38
SCR1SCR1 TY1B-GR1Q12141 1755 aa23.67■■□□□ 1.38
SCR1SCR1 TY1B-BLQ12490 1755 aa23.67■■□□□ 1.38
SCR1SCR1 NUP159P40477 1460 aa23.67■■□□□ 1.38
SCR1SCR1 GEA2P39993 1459 aaKnown RBP23.62■■□□□ 1.37
SCR1SCR1 NTE1Q04958 1679 aa23.61■■□□□ 1.37
Retrieved 100 of 5,963 RNA–protein pairs in 12 ms