RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 JPH4Q96JJ6 628 aa16.12■□□□□ 0.17
PHGDH-228ENST00000641847 SHROOM2Q13796 1616 aa16.12■□□□□ 0.17
PHGDH-228ENST00000641847 ADAMTS12P58397 1594 aa16.11■□□□□ 0.17
PHGDH-228ENST00000641847 KDM6BO15054 1643 aa16.06■□□□□ 0.16
PHGDH-228ENST00000641847 MAPKBP1O60336 1514 aa16.06■□□□□ 0.16
PHGDH-228ENST00000641847 ERICH3Q5RHP9 1530 aa16.02■□□□□ 0.15
PHGDH-228ENST00000641847 DIP2BQ9P265 1576 aa16.01■□□□□ 0.15
PHGDH-228ENST00000641847 ADCY10Q96PN6 1610 aa15.92■□□□□ 0.14
PHGDH-228ENST00000641847 TSPOAP1O95153 1857 aa15.9■□□□□ 0.14
PHGDH-228ENST00000641847 ADGRL1O94910 1474 aa15.9■□□□□ 0.14
PHGDH-228ENST00000641847 TOP2BQ02880 1626 aa15.9■□□□□ 0.14
PHGDH-228ENST00000641847 BIVM-ERCC5R4GMW8 1640 aa15.89■□□□□ 0.13
PHGDH-228ENST00000641847 RUSC2Q8N2Y8 1516 aa15.89■□□□□ 0.13
PHGDH-228ENST00000641847 PTPRGP23470 1445 aa15.85■□□□□ 0.13
PHGDH-228ENST00000641847 KIAA0586Q9BVV6 1533 aa15.84■□□□□ 0.13
PHGDH-228ENST00000641847 TTBK1Q5TCY1 1321 aaPredicted RBP15.84■□□□□ 0.13
PHGDH-228ENST00000641847 PLB1Q6P1J6 1458 aa15.83■□□□□ 0.12
PHGDH-228ENST00000641847 HECW2Q9P2P5 1572 aa15.81■□□□□ 0.12
PHGDH-228ENST00000641847 FBXO41Q8TF61 875 aa15.79■□□□□ 0.12
PHGDH-228ENST00000641847 ABCC2Q92887 1545 aa15.78■□□□□ 0.12
PHGDH-228ENST00000641847 CARMIL2Q6F5E8 1435 aa15.78■□□□□ 0.12
PHGDH-228ENST00000641847 ASXL2Q76L83 1435 aa15.78■□□□□ 0.12
PHGDH-228ENST00000641847 TNIKQ9UKE5 1360 aa15.76■□□□□ 0.11
PHGDH-228ENST00000641847 GLI2P10070 1586 aa15.76■□□□□ 0.11
PHGDH-228ENST00000641847 TEX14Q8IWB6 1497 aa15.76■□□□□ 0.11
PHGDH-228ENST00000641847 IGF1RP08069 1367 aa15.71■□□□□ 0.11
PHGDH-228ENST00000641847 KIF27Q86VH2 1401 aa15.69■□□□□ 0.1
PHGDH-228ENST00000641847 UHRF1BP1LA0JNW5 1464 aa15.69■□□□□ 0.1
PHGDH-228ENST00000641847 UACAQ9BZF9 1416 aa15.68■□□□□ 0.1
PHGDH-228ENST00000641847 COL17A1Q9UMD9 1497 aaPredicted RBP15.68■□□□□ 0.1
PHGDH-228ENST00000641847 PPRC1Q5VV67 1664 aaKnown RBP15.67■□□□□ 0.1
PHGDH-228ENST00000641847 EPRSP07814 1512 aaKnown RBP15.67■□□□□ 0.1
PHGDH-228ENST00000641847 CUL7Q14999 1698 aa15.66■□□□□ 0.1
PHGDH-228ENST00000641847 CARMIL1Q5VZK9 1371 aa15.62■□□□□ 0.09
PHGDH-228ENST00000641847 MAP3K4Q9Y6R4 1608 aa15.61■□□□□ 0.09
PHGDH-228ENST00000641847 KDM5BQ9UGL1 1544 aa15.6■□□□□ 0.09
PHGDH-228ENST00000641847 IQGAP2Q13576 1575 aa15.58■□□□□ 0.08
PHGDH-228ENST00000641847 CD109Q6YHK3 1445 aa15.55■□□□□ 0.08
PHGDH-228ENST00000641847 WDR7Q9Y4E6 1490 aa15.54■□□□□ 0.08
PHGDH-228ENST00000641847 EEA1Q15075 1411 aa15.53■□□□□ 0.08
PHGDH-228ENST00000641847 KCNH8Q96L42 1107 aa15.53■□□□□ 0.08
PHGDH-228ENST00000641847 MAGI3Q5TCQ9 1506 aa15.52■□□□□ 0.07
PHGDH-228ENST00000641847 DISP1Q96F81 1524 aa15.52■□□□□ 0.07
PHGDH-228ENST00000641847 LMTK3Q96Q04 1460 aa15.52■□□□□ 0.07
PHGDH-228ENST00000641847 ZCCHC11Q5TAX3 1644 aaKnown RBP15.51■□□□□ 0.07
PHGDH-228ENST00000641847 FAM9AQ8IZU1 332 aaPredicted RBP15.49■□□□□ 0.07
PHGDH-228ENST00000641847 PTPRMP28827 1452 aa15.46■□□□□ 0.06
PHGDH-228ENST00000641847 UGGT2Q9NYU1 1516 aa15.45■□□□□ 0.06
PHGDH-228ENST00000641847 ARID4BQ4LE39 1312 aaPredicted RBP15.43■□□□□ 0.06
PHGDH-228ENST00000641847 KIF21BO75037 1637 aa15.43■□□□□ 0.06
PHGDH-228ENST00000641847 PHLDB1Q86UU1 1377 aa15.43■□□□□ 0.06
PHGDH-228ENST00000641847 CFAP43Q8NDM7 1665 aa15.43■□□□□ 0.06
PHGDH-228ENST00000641847 CSRNP3Q8WYN3 585 aa15.41■□□□□ 0.06
PHGDH-228ENST00000641847 KIAA0556O60303 1618 aa15.41■□□□□ 0.06
PHGDH-228ENST00000641847 ARAP3Q8WWN8 1544 aa15.41■□□□□ 0.06
PHGDH-228ENST00000641847 RAPGEF2Q9Y4G8 1499 aa15.4■□□□□ 0.06
PHGDH-228ENST00000641847 GOLGA3Q08378 1498 aa15.39■□□□□ 0.05
PHGDH-228ENST00000641847 PCF11O94913 1555 aaKnown RBP15.38■□□□□ 0.05
PHGDH-228ENST00000641847 SOCS7O14512 581 aa15.37■□□□□ 0.05
PHGDH-228ENST00000641847 PRXQ9BXM0 1461 aa15.37■□□□□ 0.05
PHGDH-228ENST00000641847 CERKQ8TCT0 537 aa15.36■□□□□ 0.05
PHGDH-228ENST00000641847 DISP3Q9P2K9 1392 aa15.36■□□□□ 0.05
PHGDH-228ENST00000641847 ADAMTSL3P82987 1691 aa15.35■□□□□ 0.05
PHGDH-228ENST00000641847 RAPGEF3O95398 923 aa15.34■□□□□ 0.05
PHGDH-228ENST00000641847 HSPA2P54652 639 aa15.3■□□□□ 0.04
PHGDH-228ENST00000641847 ABCA8O94911 1581 aa15.29■□□□□ 0.04
PHGDH-228ENST00000641847 ARID3CA6NKF2 412 aa15.29■□□□□ 0.04
PHGDH-228ENST00000641847 PLPPR3Q6T4P5 718 aa15.29■□□□□ 0.04
PHGDH-228ENST00000641847 NEO1Q92859 1461 aa15.27■□□□□ 0.04
PHGDH-228ENST00000641847 POGZQ7Z3K3 1410 aa15.27■□□□□ 0.04
PHGDH-228ENST00000641847 EHMT2Q96KQ7 1210 aa15.27■□□□□ 0.04
PHGDH-228ENST00000641847 BCORL1Q5H9F3 1711 aa15.26■□□□□ 0.03
PHGDH-228ENST00000641847 MADDQ8WXG6 1647 aa15.26■□□□□ 0.03
PHGDH-228ENST00000641847 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.26■□□□□ 0.03
PHGDH-228ENST00000641847 HNRNPUL2Q1KMD3 747 aaKnown RBP15.26■□□□□ 0.03
PHGDH-228ENST00000641847 ILDR2Q71H61 639 aa15.26■□□□□ 0.03
PHGDH-228ENST00000641847 DMRT2Q9Y5R5 561 aa15.23■□□□□ 0.03
PHGDH-228ENST00000641847 CTTNBP2Q8WZ74 1663 aa15.22■□□□□ 0.03
PHGDH-228ENST00000641847 ABCA9Q8IUA7 1624 aa15.21■□□□□ 0.03
PHGDH-228ENST00000641847 ATP10BO94823 1461 aa15.21■□□□□ 0.03
PHGDH-228ENST00000641847 LOC105371045A0A1W2PR82 267 aa15.21■□□□□ 0.03
PHGDH-228ENST00000641847 FANCAO15360 1455 aa15.2■□□□□ 0.02
PHGDH-228ENST00000641847 AKNAQ7Z591 1439 aa15.19■□□□□ 0.02
PHGDH-228ENST00000641847 DENND4BO75064 1496 aaPredicted RBP15.19■□□□□ 0.02
PHGDH-228ENST00000641847 RIMS1Q86UR5 1692 aaKnown RBP15.19■□□□□ 0.02
PHGDH-228ENST00000641847 UBTFP17480 764 aaKnown RBP15.18■□□□□ 0.02
PHGDH-228ENST00000641847 P3H3Q8IVL6 736 aa15.18■□□□□ 0.02
PHGDH-228ENST00000641847 ARHGEF40Q8TER5 1519 aa15.16■□□□□ 0.02
PHGDH-228ENST00000641847 MLECQ14165 292 aa15.15■□□□□ 0.02
PHGDH-228ENST00000641847 PLEKHD1A6NEE1 506 aa15.13■□□□□ 0.01
PHGDH-228ENST00000641847 FHOD3Q2V2M9 1422 aa15.13■□□□□ 0.01
PHGDH-228ENST00000641847 FRMPD1Q5SYB0 1578 aa15.13■□□□□ 0.01
PHGDH-228ENST00000641847 YEATS2Q9ULM3 1422 aa15.13■□□□□ 0.01
PHGDH-228ENST00000641847 SPATA31D1Q6ZQQ2 1576 aa15.1■□□□□ 0.01
PHGDH-228ENST00000641847 MAGI2Q86UL8 1455 aa15.09■□□□□ 0.01
PHGDH-228ENST00000641847 EFCAB5A4FU69 1503 aa15.09■□□□□ 0.01
PHGDH-228ENST00000641847 ZFYVE16Q7Z3T8 1539 aa15.08■□□□□ 0.01
PHGDH-228ENST00000641847 CEP162Q5TB80 1403 aa15.08■□□□□ 0
PHGDH-228ENST00000641847 CFAP74Q9C0B2 1584 aa15.07■□□□□ 0
PHGDH-228ENST00000641847 RAPGEF6Q8TEU7 1601 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms