RNA–Protein interactions for RNA: ENST00000572037.5

SLC12A4-209, Transcript of solute carrier family 12 member 4, humanhuman

TSL 2 BASIC

Gene SLC12A4, Length 3,620 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A4-209ENST00000572037 SNAPC4Q5SXM2 1469 aa17.33■□□□□ 0.36
SLC12A4-209ENST00000572037 PRDM2Q13029 1718 aa17.33■□□□□ 0.36
SLC12A4-209ENST00000572037 IFT140Q96RY7 1462 aa17.32■□□□□ 0.36
SLC12A4-209ENST00000572037 WDR62O43379 1518 aa17.32■□□□□ 0.36
SLC12A4-209ENST00000572037 ZNF316A6NFI3 1004 aaPredicted RBP17.32■□□□□ 0.36
SLC12A4-209ENST00000572037 YTHDC1Q96MU7 727 aaKnown RBP17.31■□□□□ 0.36
SLC12A4-209ENST00000572037 BIVM-ERCC5R4GMW8 1640 aa17.29■□□□□ 0.36
SLC12A4-209ENST00000572037 PRXQ9BXM0 1461 aa17.29■□□□□ 0.36
SLC12A4-209ENST00000572037 ABCA10Q8WWZ4 1543 aa17.26■□□□□ 0.35
SLC12A4-209ENST00000572037 FAM50AQ14320 339 aaKnown RBP17.25■□□□□ 0.35
SLC12A4-209ENST00000572037 GRIN2BQ13224 1484 aa17.23■□□□□ 0.35
SLC12A4-209ENST00000572037 CENPBP07199 599 aaPredicted RBP17.23■□□□□ 0.35
SLC12A4-209ENST00000572037 ARAP1Q96P48 1450 aa17.21■□□□□ 0.35
SLC12A4-209ENST00000572037 SCAF1Q9H7N4 1312 aaKnown RBP17.21■□□□□ 0.35
SLC12A4-209ENST00000572037 EIF4G3O43432 1585 aaKnown RBP17.21■□□□□ 0.35
SLC12A4-209ENST00000572037 OSCARQ8IYS5 282 aa17.2■□□□□ 0.34
SLC12A4-209ENST00000572037 ERICH3Q5RHP9 1530 aa17.2■□□□□ 0.34
SLC12A4-209ENST00000572037 JPH4Q96JJ6 628 aa17.19■□□□□ 0.34
SLC12A4-209ENST00000572037 TARBP1Q13395 1621 aaKnown RBP17.18■□□□□ 0.34
SLC12A4-209ENST00000572037 CYB5RLQ6IPT4 315 aa17.18■□□□□ 0.34
SLC12A4-209ENST00000572037 NEUROD1Q13562 356 aa17.13■□□□□ 0.33
SLC12A4-209ENST00000572037 FHOD3Q2V2M9 1422 aa17.12■□□□□ 0.33
SLC12A4-209ENST00000572037 ARHGAP35Q9NRY4 1499 aa17.12■□□□□ 0.33
SLC12A4-209ENST00000572037 ACIN1Q9UKV3 1341 aaKnown RBP17.11■□□□□ 0.33
SLC12A4-209ENST00000572037 FHAD1B1AJZ9 1412 aa17.11■□□□□ 0.33
SLC12A4-209ENST00000572037 CCNB3Q8WWL7 1395 aa17.1■□□□□ 0.33
SLC12A4-209ENST00000572037 KCNH8Q96L42 1107 aa17.08■□□□□ 0.32
SLC12A4-209ENST00000572037 MIER1Q8N108 512 aa17.07■□□□□ 0.32
SLC12A4-209ENST00000572037 GTF3C3Q9Y5Q9 886 aa17.03■□□□□ 0.32
SLC12A4-209ENST00000572037 GRIN2AQ12879 1464 aa17.03■□□□□ 0.32
SLC12A4-209ENST00000572037 SYNJ2O15056 1496 aa17.02■□□□□ 0.31
SLC12A4-209ENST00000572037 ABCA5Q8WWZ7 1642 aa17.02■□□□□ 0.31
SLC12A4-209ENST00000572037 DHX57Q6P158 1386 aaKnown RBP17■□□□□ 0.31
SLC12A4-209ENST00000572037 PBRM1Q86U86 1689 aa17■□□□□ 0.31
SLC12A4-209ENST00000572037 PRG4Q92954 1404 aaPredicted RBP16.97■□□□□ 0.31
SLC12A4-209ENST00000572037 MAGI1Q96QZ7 1491 aaPredicted RBP16.96■□□□□ 0.31
SLC12A4-209ENST00000572037 ZNF777Q9ULD5 760 aaPredicted RBP16.96■□□□□ 0.31
SLC12A4-209ENST00000572037 ADAMTS12P58397 1594 aa16.94■□□□□ 0.3
SLC12A4-209ENST00000572037 WDR97A6NE52 1622 aa16.93■□□□□ 0.3
SLC12A4-209ENST00000572037 MTUS2Q5JR59 1369 aa16.92■□□□□ 0.3
SLC12A4-209ENST00000572037 RAB3GAP2Q9H2M9 1393 aa16.92■□□□□ 0.3
SLC12A4-209ENST00000572037 RRBP1Q9P2E9 1410 aaKnown RBP16.92■□□□□ 0.3
SLC12A4-209ENST00000572037 BCL11AQ9H165 835 aa16.92■□□□□ 0.3
SLC12A4-209ENST00000572037 CLSPNQ9HAW4 1339 aa16.92■□□□□ 0.3
SLC12A4-209ENST00000572037 PHLDB1Q86UU1 1377 aa16.9■□□□□ 0.3
SLC12A4-209ENST00000572037 CHD1O14646 1710 aa16.9■□□□□ 0.3
SLC12A4-209ENST00000572037 SIN3AQ96ST3 1273 aa16.9■□□□□ 0.3
SLC12A4-209ENST00000572037 TRHP20396 242 aaPredicted RBP16.89■□□□□ 0.29
SLC12A4-209ENST00000572037 MYT1LQ9UL68 1186 aa16.89■□□□□ 0.29
SLC12A4-209ENST00000572037 NPM1P06748 294 aaKnown RBP eCLIP16.88■□□□□ 0.29
SLC12A4-209ENST00000572037 CEP170Q5SW79 1584 aa16.87■□□□□ 0.29
SLC12A4-209ENST00000572037 LRRC9Q6ZRR7 1453 aa16.87■□□□□ 0.29
SLC12A4-209ENST00000572037 PTPRGP23470 1445 aa16.86■□□□□ 0.29
SLC12A4-209ENST00000572037 ERCC6L2Q5T890 1561 aa16.85■□□□□ 0.29
SLC12A4-209ENST00000572037 CUL7Q14999 1698 aa16.85■□□□□ 0.29
SLC12A4-209ENST00000572037 CARMIL2Q6F5E8 1435 aa16.84■□□□□ 0.29
SLC12A4-209ENST00000572037 SETD5Q9C0A6 1442 aa16.84■□□□□ 0.29
SLC12A4-209ENST00000572037 TIAM1Q13009 1591 aa16.84■□□□□ 0.29
SLC12A4-209ENST00000572037 CHIC2Q9UKJ5 165 aa16.83■□□□□ 0.29
SLC12A4-209ENST00000572037 KIAA0586Q9BVV6 1533 aa16.83■□□□□ 0.28
SLC12A4-209ENST00000572037 PRKCSHP14314 528 aaPredicted RBP16.82■□□□□ 0.28
SLC12A4-209ENST00000572037 HIRIP3Q9BW71 556 aaPredicted RBP16.82■□□□□ 0.28
SLC12A4-209ENST00000572037 IQGAP2Q13576 1575 aa16.82■□□□□ 0.28
SLC12A4-209ENST00000572037 PLB1Q6P1J6 1458 aa16.82■□□□□ 0.28
SLC12A4-209ENST00000572037 ERICH6Q7L0X2 663 aa16.8■□□□□ 0.28
SLC12A4-209ENST00000572037 FMN1Q68DA7 1419 aa16.8■□□□□ 0.28
SLC12A4-209ENST00000572037 TRIM52Q96A61 297 aa16.79■□□□□ 0.28
SLC12A4-209ENST00000572037 PCF11O94913 1555 aaKnown RBP16.78■□□□□ 0.28
SLC12A4-209ENST00000572037 RRP7BPQ9NSQ0 103 aa16.77■□□□□ 0.27
SLC12A4-209ENST00000572037 PLEKHD1A6NEE1 506 aa16.76■□□□□ 0.27
SLC12A4-209ENST00000572037 DDX10Q13206 875 aaKnown RBP16.75■□□□□ 0.27
SLC12A4-209ENST00000572037 NUP160Q12769 1436 aa16.75■□□□□ 0.27
SLC12A4-209ENST00000572037 CASKIN1Q8WXD9 1431 aa16.74■□□□□ 0.27
SLC12A4-209ENST00000572037 FYCO1Q9BQS8 1478 aa16.71■□□□□ 0.27
SLC12A4-209ENST00000572037 CDK13Q14004 1512 aaKnown RBP16.71■□□□□ 0.26
SLC12A4-209ENST00000572037 CDK11AQ9UQ88 783 aaPredicted RBP16.69■□□□□ 0.26
SLC12A4-209ENST00000572037 TONSLQ96HA7 1378 aa16.69■□□□□ 0.26
SLC12A4-209ENST00000572037 EFCAB5A4FU69 1503 aa16.69■□□□□ 0.26
SLC12A4-209ENST00000572037 PLPPR3Q6T4P5 718 aa16.68■□□□□ 0.26
SLC12A4-209ENST00000572037 MAP3K1Q13233 1512 aa16.68■□□□□ 0.26
SLC12A4-209ENST00000572037 DISP1Q96F81 1524 aa16.68■□□□□ 0.26
SLC12A4-209ENST00000572037 CTTNBP2Q8WZ74 1663 aa16.66■□□□□ 0.26
SLC12A4-209ENST00000572037 FGD6Q6ZV73 1430 aa16.66■□□□□ 0.26
SLC12A4-209ENST00000572037 ZNF644Q9H582 1327 aaPredicted RBP16.63■□□□□ 0.25
SLC12A4-209ENST00000572037 FAM69CQ0P6D2 419 aa16.63■□□□□ 0.25
SLC12A4-209ENST00000572037 ARHGEF11O15085 1522 aa16.6■□□□□ 0.25
SLC12A4-209ENST00000572037 NCOA2Q15596 1464 aa16.6■□□□□ 0.25
SLC12A4-209ENST00000572037 DNAJC5Q9H3Z4 198 aa16.59■□□□□ 0.25
SLC12A4-209ENST00000572037 CFDP1Q9UEE9 299 aaPredicted RBP16.59■□□□□ 0.25
SLC12A4-209ENST00000572037 KIAA0556O60303 1618 aa16.58■□□□□ 0.24
SLC12A4-209ENST00000572037 PPP1R15AO75807 674 aaPredicted RBP16.57■□□□□ 0.24
SLC12A4-209ENST00000572037 UACAQ9BZF9 1416 aa16.57■□□□□ 0.24
SLC12A4-209ENST00000572037 MAPKBP1O60336 1514 aa16.56■□□□□ 0.24
SLC12A4-209ENST00000572037 MYOM3Q5VTT5 1437 aa16.56■□□□□ 0.24
SLC12A4-209ENST00000572037 CCDC18Q5T9S5 1454 aa16.55■□□□□ 0.24
SLC12A4-209ENST00000572037 HNRNPMP52272 730 aaKnown RBP eCLIP16.55■□□□□ 0.24
SLC12A4-209ENST00000572037 FOXD1Q16676 465 aa16.55■□□□□ 0.24
SLC12A4-209ENST00000572037 CFAP43Q8NDM7 1665 aa16.54■□□□□ 0.24
SLC12A4-209ENST00000572037 ANP32CO43423 234 aa16.54■□□□□ 0.24
SLC12A4-209ENST00000572037 UGGT2Q9NYU1 1516 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms