RNA–Protein interactions for RNA: ENST00000572037.5

SLC12A4-209, Transcript of solute carrier family 12 member 4, humanhuman

TSL 2 BASIC

Gene SLC12A4, Length 3,620 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A4-209ENST00000572037 NCBP2P52298 156 aaKnown RBP eCLIP11.15□□□□□ -0.625e-18■■□□□ 13.3
SLC12A4-209ENST00000572037 U2AF2P26368 475 aaKnown RBP eCLIP13.4□□□□□ -0.264e-13■□□□□ 10.1
SLC12A4-209ENST00000572037 EIF3HO15372 352 aaKnown RBP eCLIP12.55□□□□□ -0.42e-12■■□□□ 13.9
SLC12A4-209ENST00000572037 TIA1P31483 386 aaKnown RBP eCLIP11.28□□□□□ -0.62e-12■■■■■ 37.2
SLC12A4-209ENST00000572037 MATR3P43243 847 aaKnown RBP eCLIP13.02□□□□□ -0.332e-11■■□□□ 11.5
SLC12A4-209ENST00000572037 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.98□□□□□ -0.177e-11■□□□□ 8.5
SLC12A4-209ENST00000572037 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.74□□□□□ -0.851e-10■■■□□ 17.8
SLC12A4-209ENST00000572037 EIF3DO15371 548 aaKnown RBP eCLIP12.71□□□□□ -0.372e-10■■□□□ 11.4
SLC12A4-209ENST00000572037 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.43□□□□□ -0.423e-10■■■■■ 37.7
SLC12A4-209ENST00000572037 RBM15Q96T37 977 aaKnown RBP eCLIP12.38□□□□□ -0.435e-10■■■□□ 18.1
SLC12A4-209ENST00000572037 PABPC4Q13310 644 aaKnown RBP eCLIP13□□□□□ -0.336e-10■■□□□ 11.4
SLC12A4-209ENST00000572037 TARDBPQ13148 414 aaKnown RBP eCLIP11.14□□□□□ -0.637e-10■■■■■ 35.9
SLC12A4-209ENST00000572037 TIAL1Q01085 375 aaKnown RBP eCLIP11.58□□□□□ -0.561e-9■■■□□ 15.7
SLC12A4-209ENST00000572037 PPIGQ13427 754 aaKnown RBP eCLIP11.71□□□□□ -0.531e-9■■■□□ 15.1
SLC12A4-209ENST00000572037 ZC3H11AO75152 810 aaKnown RBP eCLIP12.43□□□□□ -0.422e-9■□□□□ 9.3
SLC12A4-209ENST00000572037 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.91□□□□□ -0.53e-9■■■□□ 15.7
SLC12A4-209ENST00000572037 UPF1Q92900 1129 aaKnown RBP eCLIP13.69□□□□□ -0.225e-9■■■□□ 15.9
SLC12A4-209ENST00000572037 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.66□□□□□ -0.388e-9■■■□□ 15.5
SLC12A4-209ENST00000572037 PTBP1P26599 531 aaKnown RBP eCLIP10.63□□□□□ -0.719e-9■■■□□ 17.3
SLC12A4-209ENST00000572037 DKC1O60832 514 aaKnown RBP eCLIP12.6□□□□□ -0.391e-8■■□□□ 13
SLC12A4-209ENST00000572037 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.47■□□□□ 0.231e-8■■□□□ 12
SLC12A4-209ENST00000572037 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.97□□□□□ -0.331e-8■■■■■ 27.7
SLC12A4-209ENST00000572037 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.12■□□□□ 0.172e-8■■■□□ 16.4
SLC12A4-209ENST00000572037 NKRFO15226 690 aaKnown RBP eCLIP12.98□□□□□ -0.338e-8■■■□□ 18.6
SLC12A4-209ENST00000572037 EFTUD2Q15029 972 aaKnown RBP eCLIP12.25□□□□□ -0.459e-8■■■■□ 25
SLC12A4-209ENST00000572037 AQRO60306 1485 aaKnown RBP eCLIP17.71■□□□□ 0.432e-7■■■■■ 35
SLC12A4-209ENST00000572037 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.11□□□□□ -0.472e-7■■□□□ 11.9
SLC12A4-209ENST00000572037 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.41□□□□□ -0.262e-7■■□□□ 11.4
SLC12A4-209ENST00000572037 CDC40O60508 579 aaKnown RBP eCLIP10.72□□□□□ -0.693e-7■■□□□ 12.2
SLC12A4-209ENST00000572037 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.65□□□□□ -0.383e-7■■□□□ 12.8
SLC12A4-209ENST00000572037 PRPF4O43172 522 aaKnown RBP eCLIP12.12□□□□□ -0.473e-7■■□□□ 12.6
SLC12A4-209ENST00000572037 SRSF1Q07955 248 aaKnown RBP eCLIP9.43□□□□□ -0.94e-7■■□□□ 11.9
SLC12A4-209ENST00000572037 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.31□□□□□ -0.64e-7■■■□□ 16
SLC12A4-209ENST00000572037 HLTFQ14527 1009 aaKnown RBP eCLIP12.83□□□□□ -0.365e-7■■■□□ 18.7
SLC12A4-209ENST00000572037 SF3B4Q15427 424 aaKnown RBP eCLIP11.21□□□□□ -0.615e-7■■■■□ 22.6
SLC12A4-209ENST00000572037 AKAP1Q92667 903 aaKnown RBP eCLIP10.92□□□□□ -0.665e-7■□□□□ 8.3
SLC12A4-209ENST00000572037 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.78□□□□□ -0.27e-7■■■■□ 25.4
SLC12A4-209ENST00000572037 RBM22Q9NW64 420 aaKnown RBP eCLIP11.95□□□□□ -0.58e-7■■■□□ 17
SLC12A4-209ENST00000572037 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.19□□□□□ -0.38e-7■■■■□ 24.4
SLC12A4-209ENST00000572037 PABPN1Q86U42 306 aaKnown RBP eCLIP20.32■□□□□ 0.848e-7■■□□□ 11.4
SLC12A4-209ENST00000572037 SND1Q7KZF4 910 aaKnown RBP eCLIP12.85□□□□□ -0.359e-7■□□□□ 8.9
SLC12A4-209ENST00000572037 EIF4G2P78344 907 aaKnown RBP eCLIP16.36■□□□□ 0.219e-7■■■■■ 27.1
SLC12A4-209ENST00000572037 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.89□□□□□ -0.359e-7■■■■■ 92
SLC12A4-209ENST00000572037 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.03□□□□□ -0.321e-6■■■□□ 16.2
SLC12A4-209ENST00000572037 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.5□□□□□ -0.411e-6■□□□□ 9.7
SLC12A4-209ENST00000572037 METAP2P50579 478 aaKnown RBP eCLIP13.66□□□□□ -0.221e-6■■■■□ 24.2
SLC12A4-209ENST00000572037 SF3A3Q12874 501 aaKnown RBP eCLIP12.62□□□□□ -0.391e-6■■■■□ 21.3
SLC12A4-209ENST00000572037 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.67□□□□□ -0.541e-6■■■■□ 24.4
SLC12A4-209ENST00000572037 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.14□□□□□ -0.471e-6■■■□□ 16.9
SLC12A4-209ENST00000572037 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.86□□□□□ -0.512e-6■■■■■ 69.6
SLC12A4-209ENST00000572037 PCBP2Q15366 365 aaKnown RBP eCLIP11.46□□□□□ -0.572e-6■■□□□ 13.2
SLC12A4-209ENST00000572037 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.71□□□□□ -0.692e-6■□□□□ 8.3
SLC12A4-209ENST00000572037 ZNF622Q969S3 477 aaKnown RBP eCLIP13.71□□□□□ -0.212e-6■■□□□ 11.7
SLC12A4-209ENST00000572037 YBX3P16989 372 aaKnown RBP eCLIP13.25□□□□□ -0.292e-6■□□□□ 10.3
SLC12A4-209ENST00000572037 LSM11P83369 360 aaKnown RBP eCLIP11.05□□□□□ -0.642e-6■■■□□ 18.1
SLC12A4-209ENST00000572037 RBFOX2O43251 390 aaKnown RBP eCLIP9.62□□□□□ -0.873e-6■■□□□ 13.4
SLC12A4-209ENST00000572037 SF3B1O75533 1304 aaKnown RBP eCLIP11.88□□□□□ -0.513e-6■■■■■ 160.8
SLC12A4-209ENST00000572037 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.27□□□□□ -0.293e-6■□□□□ 8.8
SLC12A4-209ENST00000572037 FUSP35637 526 aaKnown RBP eCLIP7.91□□□□□ -1.144e-6■□□□□ 11.3
SLC12A4-209ENST00000572037 RBM5P52756 815 aaKnown RBP eCLIP13.4□□□□□ -0.264e-6■■■■□ 19.7
SLC12A4-209ENST00000572037 HNRNPKP61978 463 aaKnown RBP eCLIP10.73□□□□□ -0.694e-6■■■■■ 30
SLC12A4-209ENST00000572037 FKBP4Q02790 459 aaKnown RBP eCLIP13.97□□□□□ -0.178e-6■■■□□ 17.9
Retrieved 62 of 62 RNA–protein pairs in 13.6 ms