RNA–Protein interactions for RNA: ENST00000572037.5

SLC12A4-209, Transcript of solute carrier family 12 member 4, humanhuman

TSL 2 BASIC

Gene SLC12A4, Length 3,620 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A4-209ENST00000572037 NISCHQ9Y2I1 1504 aa24.34■■□□□ 1.49
SLC12A4-209ENST00000572037 DCAF8L2P0C7V8 631 aa21.8■■□□□ 1.08
SLC12A4-209ENST00000572037 ABCC9O60706 1549 aa21.22■□□□□ 0.99
SLC12A4-209ENST00000572037 SHROOM4Q9ULL8 1493 aa20.93■□□□□ 0.94
SLC12A4-209ENST00000572037 CCDC180Q9P1Z9 1646 aa20.85■□□□□ 0.93
SLC12A4-209ENST00000572037 SUPT5HO00267 1087 aaKnown RBP20.55■□□□□ 0.88
SLC12A4-209ENST00000572037 PABPN1Q86U42 306 aaKnown RBP eCLIP20.32■□□□□ 0.848e-7■■□□□ 11.4
SLC12A4-209ENST00000572037 ZCCHC6Q5VYS8 1495 aaKnown RBP20.25■□□□□ 0.83
SLC12A4-209ENST00000572037 SCRIBQ14160 1630 aa20.01■□□□□ 0.79
SLC12A4-209ENST00000572037 RB1CC1Q8TDY2 1594 aa19.83■□□□□ 0.77
SLC12A4-209ENST00000572037 NACADO15069 1562 aa19.75■□□□□ 0.75
SLC12A4-209ENST00000572037 CHIC1Q5VXU3 224 aa19.57■□□□□ 0.72
SLC12A4-209ENST00000572037 DCAF1Q9Y4B6 1507 aa19.56■□□□□ 0.72
SLC12A4-209ENST00000572037 CECR2Q9BXF3 1484 aa19.35■□□□□ 0.69
SLC12A4-209ENST00000572037 MYO15BQ96JP2 1530 aa19.33■□□□□ 0.68
SLC12A4-209ENST00000572037 UNC13AQ9UPW8 1703 aa19.27■□□□□ 0.68
SLC12A4-209ENST00000572037 BICRAQ9NZM4 1560 aa19.2■□□□□ 0.66
SLC12A4-209ENST00000572037 LOC105371045A0A1W2PR82 267 aa19.17■□□□□ 0.66
SLC12A4-209ENST00000572037 DNAJC5BQ9UF47 199 aa19.16■□□□□ 0.66
SLC12A4-209ENST00000572037 EHMT2Q96KQ7 1210 aa19.13■□□□□ 0.65
SLC12A4-209ENST00000572037 FAM9AQ8IZU1 332 aaPredicted RBP19.1■□□□□ 0.65
SLC12A4-209ENST00000572037 PCGF6Q9BYE7 350 aa19.08■□□□□ 0.65
SLC12A4-209ENST00000572037 TRIM41Q8WV44 630 aa19.05■□□□□ 0.64
SLC12A4-209ENST00000572037 MROH2BQ7Z745 1585 aa19.03■□□□□ 0.64
SLC12A4-209ENST00000572037 RSF1Q96T23 1441 aaPredicted RBP19■□□□□ 0.63
SLC12A4-209ENST00000572037 WIZO95785 1651 aa18.85■□□□□ 0.61
SLC12A4-209ENST00000572037 EIF4G1Q04637 1599 aaKnown RBP18.81■□□□□ 0.6
SLC12A4-209ENST00000572037 BAZ1AQ9NRL2 1556 aaPredicted RBP18.78■□□□□ 0.6
SLC12A4-209ENST00000572037 SMARCA4P51532 1647 aa18.74■□□□□ 0.59
SLC12A4-209ENST00000572037 HRCP23327 699 aa18.72■□□□□ 0.59
SLC12A4-209ENST00000572037 PELP1Q8IZL8 1130 aaKnown RBP18.71■□□□□ 0.59
SLC12A4-209ENST00000572037 CC2D2AQ9P2K1 1620 aa18.7■□□□□ 0.58
SLC12A4-209ENST00000572037 BAZ1BQ9UIG0 1483 aaKnown RBP18.7■□□□□ 0.58
SLC12A4-209ENST00000572037 ATAD2BQ9ULI0 1458 aa18.67■□□□□ 0.58
SLC12A4-209ENST00000572037 TRIM26Q12899 539 aaPredicted RBP18.56■□□□□ 0.56
SLC12A4-209ENST00000572037 PPARGC1BQ86YN6 1023 aaKnown RBP18.55■□□□□ 0.56
SLC12A4-209ENST00000572037 CCDC88BA6NC98 1476 aa18.47■□□□□ 0.55
SLC12A4-209ENST00000572037 SMARCA2P51531 1590 aa18.46■□□□□ 0.55
SLC12A4-209ENST00000572037 TTBK1Q5TCY1 1321 aaPredicted RBP18.44■□□□□ 0.54
SLC12A4-209ENST00000572037 NESP48681 1621 aa18.42■□□□□ 0.54
SLC12A4-209ENST00000572037 RANGAP1P46060 587 aaPredicted RBP18.37■□□□□ 0.53
SLC12A4-209ENST00000572037 NCAPD3P42695 1498 aa18.37■□□□□ 0.53
SLC12A4-209ENST00000572037 TOP2AP11388 1531 aaKnown RBP18.35■□□□□ 0.53
SLC12A4-209ENST00000572037 MYT1Q01538 1121 aa18.33■□□□□ 0.52
SLC12A4-209ENST00000572037 UBTFP17480 764 aaKnown RBP18.3■□□□□ 0.52
SLC12A4-209ENST00000572037 ABCC8Q09428 1581 aa18.22■□□□□ 0.51
SLC12A4-209ENST00000572037 ERCC6Q03468 1493 aa18.21■□□□□ 0.5
SLC12A4-209ENST00000572037 CADPSQ9ULU8 1353 aa18.17■□□□□ 0.5
SLC12A4-209ENST00000572037 HMGXB3Q12766 1538 aa18.13■□□□□ 0.49
SLC12A4-209ENST00000572037 CSRNP3Q8WYN3 585 aa18.11■□□□□ 0.49
SLC12A4-209ENST00000572037 PEG3Q9GZU2 1588 aa18.1■□□□□ 0.49
SLC12A4-209ENST00000572037 ZEB1P37275 1124 aaPredicted RBP18.1■□□□□ 0.49
SLC12A4-209ENST00000572037 FBLN2P98095 1184 aa18.08■□□□□ 0.48
SLC12A4-209ENST00000572037 SOGA1O94964 1423 aa18.07■□□□□ 0.48
SLC12A4-209ENST00000572037 CCER1Q8TC90 406 aaPredicted RBP18.05■□□□□ 0.48
SLC12A4-209ENST00000572037 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.03■□□□□ 0.48
SLC12A4-209ENST00000572037 FANCD2Q9BXW9 1451 aa18.02■□□□□ 0.48
SLC12A4-209ENST00000572037 WRNQ14191 1432 aaPredicted RBP eCLIP17.98■□□□□ 0.47
SLC12A4-209ENST00000572037 PDS5BQ9NTI5 1447 aa17.95■□□□□ 0.46
SLC12A4-209ENST00000572037 CFTRP13569 1480 aa17.94■□□□□ 0.46
SLC12A4-209ENST00000572037 RUSC2Q8N2Y8 1516 aa17.94■□□□□ 0.46
SLC12A4-209ENST00000572037 APLP2Q06481 763 aa17.93■□□□□ 0.46
SLC12A4-209ENST00000572037 CEP162Q5TB80 1403 aa17.92■□□□□ 0.46
SLC12A4-209ENST00000572037 CEP164Q9UPV0 1460 aa17.9■□□□□ 0.46
SLC12A4-209ENST00000572037 TDRD9Q8NDG6 1382 aaKnown RBP17.9■□□□□ 0.46
SLC12A4-209ENST00000572037 RAD54L2Q9Y4B4 1467 aa17.85■□□□□ 0.45
SLC12A4-209ENST00000572037 TNIKQ9UKE5 1360 aa17.84■□□□□ 0.45
SLC12A4-209ENST00000572037 EEA1Q15075 1411 aa17.83■□□□□ 0.44
SLC12A4-209ENST00000572037 HNRNPUL2Q1KMD3 747 aaKnown RBP17.8■□□□□ 0.44
SLC12A4-209ENST00000572037 GOLGA3Q08378 1498 aa17.79■□□□□ 0.44
SLC12A4-209ENST00000572037 SYNJ1O43426 1573 aa17.77■□□□□ 0.43
SLC12A4-209ENST00000572037 KIF21AQ7Z4S6 1674 aa17.76■□□□□ 0.43
SLC12A4-209ENST00000572037 P3H3Q8IVL6 736 aa17.76■□□□□ 0.43
SLC12A4-209ENST00000572037 ATP1B4Q9UN42 357 aaPredicted RBP17.76■□□□□ 0.43
SLC12A4-209ENST00000572037 CUX1P39880 1505 aa17.74■□□□□ 0.43
SLC12A4-209ENST00000572037 CUX2O14529 1486 aa17.73■□□□□ 0.43
SLC12A4-209ENST00000572037 FGD5Q6ZNL6 1462 aa17.73■□□□□ 0.43
SLC12A4-209ENST00000572037 LAMC3Q9Y6N6 1575 aa17.73■□□□□ 0.43
SLC12A4-209ENST00000572037 URB2Q14146 1524 aaKnown RBP17.73■□□□□ 0.43
SLC12A4-209ENST00000572037 AQRO60306 1485 aaKnown RBP eCLIP17.71■□□□□ 0.432e-7■■■■■ 35
SLC12A4-209ENST00000572037 ARID3CA6NKF2 412 aa17.7■□□□□ 0.42
SLC12A4-209ENST00000572037 CLIP1P30622 1438 aa17.69■□□□□ 0.42
SLC12A4-209ENST00000572037 TOPBP1Q92547 1522 aa17.68■□□□□ 0.42
SLC12A4-209ENST00000572037 MRC2Q9UBG0 1479 aa17.64■□□□□ 0.41
SLC12A4-209ENST00000572037 CHMP7Q8WUX9 453 aaPredicted RBP17.64■□□□□ 0.41
SLC12A4-209ENST00000572037 POLA1P09884 1462 aaPredicted RBP17.63■□□□□ 0.41
SLC12A4-209ENST00000572037 ZNF608Q9ULD9 1512 aaPredicted RBP17.61■□□□□ 0.41
SLC12A4-209ENST00000572037 RAPGEF2Q9Y4G8 1499 aa17.59■□□□□ 0.41
SLC12A4-209ENST00000572037 KIF27Q86VH2 1401 aa17.53■□□□□ 0.4
SLC12A4-209ENST00000572037 ITGAEP38570 1179 aa17.52■□□□□ 0.4
SLC12A4-209ENST00000572037 DNMBPQ6XZF7 1577 aa17.49■□□□□ 0.39
SLC12A4-209ENST00000572037 TOP2BQ02880 1626 aa17.47■□□□□ 0.39
SLC12A4-209ENST00000572037 DIEXFQ68CQ4 756 aaKnown RBP17.47■□□□□ 0.39
SLC12A4-209ENST00000572037 VPS8Q8N3P4 1428 aa17.47■□□□□ 0.39
SLC12A4-209ENST00000572037 CARMIL1Q5VZK9 1371 aa17.45■□□□□ 0.38
SLC12A4-209ENST00000572037 GAPVD1Q14C86 1478 aa17.43■□□□□ 0.38
SLC12A4-209ENST00000572037 KIF21BO75037 1637 aa17.42■□□□□ 0.38
SLC12A4-209ENST00000572037 IGF1RP08069 1367 aa17.42■□□□□ 0.38
SLC12A4-209ENST00000572037 KANK4Q5T7N3 995 aaPredicted RBP17.36■□□□□ 0.37
SLC12A4-209ENST00000572037 THOC2Q8NI27 1593 aaKnown RBP17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms