RNA–Protein interactions for RNA: ENST00000531857.1

PKP3-208, Transcript of plakophilin 3, humanhuman

TSL 4

Gene PKP3, Length 687 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-208ENST00000531857 RUSC2Q8N2Y8 1516 aa30.83■■■□□ 2.53
PKP3-208ENST00000531857 ADCY10Q96PN6 1610 aa30.63■■■□□ 2.49
PKP3-208ENST00000531857 IGF1RP08069 1367 aa30.61■■■□□ 2.49
PKP3-208ENST00000531857 CUL7Q14999 1698 aa30.59■■■□□ 2.49
PKP3-208ENST00000531857 KIAA0586Q9BVV6 1533 aa30.58■■■□□ 2.49
PKP3-208ENST00000531857 MAPKBP1O60336 1514 aa30.57■■■□□ 2.49
PKP3-208ENST00000531857 ABCC10Q5T3U5 1492 aa30.57■■■□□ 2.48
PKP3-208ENST00000531857 KIF27Q86VH2 1401 aa30.56■■■□□ 2.48
PKP3-208ENST00000531857 FAM69CQ0P6D2 419 aa30.55■■■□□ 2.48
PKP3-208ENST00000531857 NPM1P06748 294 aaKnown RBP eCLIP30.54■■■□□ 2.48
PKP3-208ENST00000531857 DIP2BQ9P265 1576 aa30.54■■■□□ 2.48
PKP3-208ENST00000531857 TSPOAP1O95153 1857 aa30.44■■■□□ 2.46
PKP3-208ENST00000531857 CARMIL1Q5VZK9 1371 aa30.39■■■□□ 2.45
PKP3-208ENST00000531857 PTPRGP23470 1445 aa30.34■■■□□ 2.45
PKP3-208ENST00000531857 KDM6BO15054 1643 aa30.33■■■□□ 2.45
PKP3-208ENST00000531857 TTBK1Q5TCY1 1321 aaPredicted RBP30.32■■■□□ 2.44
PKP3-208ENST00000531857 IQGAP2Q13576 1575 aa30.29■■■□□ 2.44
PKP3-208ENST00000531857 CARMIL2Q6F5E8 1435 aa30.26■■■□□ 2.43
PKP3-208ENST00000531857 TNIKQ9UKE5 1360 aa30.26■■■□□ 2.43
PKP3-208ENST00000531857 ABCC2Q92887 1545 aa30.23■■■□□ 2.43
PKP3-208ENST00000531857 PPRC1Q5VV67 1664 aaKnown RBP30.17■■■□□ 2.42
PKP3-208ENST00000531857 DISP1Q96F81 1524 aa30.17■■■□□ 2.42
PKP3-208ENST00000531857 ASXL2Q76L83 1435 aa30.16■■■□□ 2.42
PKP3-208ENST00000531857 UHRF1BP1LA0JNW5 1464 aa30.14■■■□□ 2.42
PKP3-208ENST00000531857 KDM4FA0A1W2PPD8 638 aa30.13■■■□□ 2.41
PKP3-208ENST00000531857 UACAQ9BZF9 1416 aa30.12■■■□□ 2.41
PKP3-208ENST00000531857 PLB1Q6P1J6 1458 aa30.12■■■□□ 2.41
PKP3-208ENST00000531857 GLI2P10070 1586 aa30.11■■■□□ 2.41
PKP3-208ENST00000531857 RAPGEF2Q9Y4G8 1499 aa30.09■■■□□ 2.41
PKP3-208ENST00000531857 UGGT2Q9NYU1 1516 aa30.07■■■□□ 2.4
PKP3-208ENST00000531857 KIAA0556O60303 1618 aa30.04■■■□□ 2.4
PKP3-208ENST00000531857 ZCCHC11Q5TAX3 1644 aaKnown RBP30.03■■■□□ 2.4
PKP3-208ENST00000531857 KDM5BQ9UGL1 1544 aa30.02■■■□□ 2.4
PKP3-208ENST00000531857 MAP3K4Q9Y6R4 1608 aa30■■■□□ 2.39
PKP3-208ENST00000531857 EPRSP07814 1512 aaKnown RBP29.99■■■□□ 2.39
PKP3-208ENST00000531857 CTTNBP2Q8WZ74 1663 aa29.97■■■□□ 2.39
PKP3-208ENST00000531857 COL17A1Q9UMD9 1497 aaPredicted RBP29.93■■■□□ 2.38
PKP3-208ENST00000531857 TEX14Q8IWB6 1497 aa29.84■■■□□ 2.37
PKP3-208ENST00000531857 ADGRL1O94910 1474 aa29.83■■■□□ 2.37
PKP3-208ENST00000531857 WDR7Q9Y4E6 1490 aa29.81■■■□□ 2.36
PKP3-208ENST00000531857 ABCA8O94911 1581 aa29.77■■■□□ 2.36
PKP3-208ENST00000531857 GOLGA3Q08378 1498 aa29.76■■■□□ 2.35
PKP3-208ENST00000531857 PRXQ9BXM0 1461 aa29.72■■■□□ 2.35
PKP3-208ENST00000531857 CFAP43Q8NDM7 1665 aa29.72■■■□□ 2.35
PKP3-208ENST00000531857 KCNH8Q96L42 1107 aa29.67■■■□□ 2.34
PKP3-208ENST00000531857 CD109Q6YHK3 1445 aa29.66■■■□□ 2.34
PKP3-208ENST00000531857 MAGI3Q5TCQ9 1506 aa29.65■■■□□ 2.34
PKP3-208ENST00000531857 P3H3Q8IVL6 736 aa29.55■■■□□ 2.32
PKP3-208ENST00000531857 ARID3CA6NKF2 412 aa29.54■■■□□ 2.32
PKP3-208ENST00000531857 HECW2Q9P2P5 1572 aa29.53■■■□□ 2.32
PKP3-208ENST00000531857 ATP10BO94823 1461 aa29.51■■■□□ 2.31
PKP3-208ENST00000531857 KIF21BO75037 1637 aa29.49■■■□□ 2.31
PKP3-208ENST00000531857 ILDR1Q86SU0 546 aaPredicted RBP29.47■■■□□ 2.31
PKP3-208ENST00000531857 SAMD9Q5K651 1589 aa29.47■■■□□ 2.31
PKP3-208ENST00000531857 ABCA9Q8IUA7 1624 aa29.44■■■□□ 2.3
PKP3-208ENST00000531857 ARAP3Q8WWN8 1544 aa29.44■■■□□ 2.3
PKP3-208ENST00000531857 RAPGEF6Q8TEU7 1601 aa29.42■■■□□ 2.3
PKP3-208ENST00000531857 FAM9AQ8IZU1 332 aaPredicted RBP29.41■■■□□ 2.3
PKP3-208ENST00000531857 CSRNP3Q8WYN3 585 aa29.4■■■□□ 2.3
PKP3-208ENST00000531857 PHLDB1Q86UU1 1377 aa29.28■■■□□ 2.28
PKP3-208ENST00000531857 NUP153P49790 1475 aaKnown RBP29.28■■■□□ 2.28
PKP3-208ENST00000531857 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.27■■■□□ 2.28
PKP3-208ENST00000531857 RAPGEF3O95398 923 aa29.27■■■□□ 2.28
PKP3-208ENST00000531857 RANGAP1P46060 587 aaPredicted RBP29.27■■■□□ 2.28
PKP3-208ENST00000531857 HNRNPUL2Q1KMD3 747 aaKnown RBP29.27■■■□□ 2.28
PKP3-208ENST00000531857 NEO1Q92859 1461 aa29.25■■■□□ 2.27
PKP3-208ENST00000531857 FRMPD1Q5SYB0 1578 aa29.25■■■□□ 2.27
PKP3-208ENST00000531857 ADAMTSL3P82987 1691 aa29.25■■■□□ 2.27
PKP3-208ENST00000531857 FHOD3Q2V2M9 1422 aa29.23■■■□□ 2.27
PKP3-208ENST00000531857 EEA1Q15075 1411 aa29.2■■■□□ 2.26
PKP3-208ENST00000531857 PTPRMP28827 1452 aa29.17■■■□□ 2.26
PKP3-208ENST00000531857 BCORL1Q5H9F3 1711 aa29.16■■■□□ 2.26
PKP3-208ENST00000531857 RICTORQ6R327 1708 aa29.13■■■□□ 2.25
PKP3-208ENST00000531857 MADDQ8WXG6 1647 aa29.11■■■□□ 2.25
PKP3-208ENST00000531857 PLEKHD1A6NEE1 506 aa29.09■■■□□ 2.25
PKP3-208ENST00000531857 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.09■■■□□ 2.253e-8■□□□□ 9.7
PKP3-208ENST00000531857 EFCAB5A4FU69 1503 aa29.07■■■□□ 2.24
PKP3-208ENST00000531857 TTC37Q6PGP7 1564 aa29.06■■■□□ 2.24
PKP3-208ENST00000531857 ARHGEF40Q8TER5 1519 aa29.06■■■□□ 2.24
PKP3-208ENST00000531857 ARID4BQ4LE39 1312 aaPredicted RBP29.05■■■□□ 2.24
PKP3-208ENST00000531857 CFAP74Q9C0B2 1584 aa29.05■■■□□ 2.24
PKP3-208ENST00000531857 DENND4BO75064 1496 aaPredicted RBP29.04■■■□□ 2.24
PKP3-208ENST00000531857 AKNAQ7Z591 1439 aa29.04■■■□□ 2.24
PKP3-208ENST00000531857 FANCAO15360 1455 aa29.04■■■□□ 2.24
PKP3-208ENST00000531857 RIMS1Q86UR5 1692 aaKnown RBP29.01■■■□□ 2.23
PKP3-208ENST00000531857 CDK13Q14004 1512 aaKnown RBP29■■■□□ 2.23
PKP3-208ENST00000531857 SIGLEC1Q9BZZ2 1709 aa28.99■■■□□ 2.23
PKP3-208ENST00000531857 ZMYM4Q5VZL5 1548 aa28.95■■■□□ 2.23
PKP3-208ENST00000531857 PCF11O94913 1555 aaKnown RBP28.95■■■□□ 2.22
PKP3-208ENST00000531857 LMTK3Q96Q04 1460 aa28.92■■■□□ 2.22
PKP3-208ENST00000531857 ZFYVE16Q7Z3T8 1539 aa28.9■■■□□ 2.22
PKP3-208ENST00000531857 EHMT2Q96KQ7 1210 aa28.9■■■□□ 2.22
PKP3-208ENST00000531857 YEATS2Q9ULM3 1422 aa28.9■■■□□ 2.22
PKP3-208ENST00000531857 HECW1Q76N89 1606 aa28.89■■■□□ 2.22
PKP3-208ENST00000531857 FBXO41Q8TF61 875 aa28.85■■■□□ 2.21
PKP3-208ENST00000531857 MYO5CQ9NQX4 1742 aa28.85■■■□□ 2.21
PKP3-208ENST00000531857 PLCH2O75038 1416 aa28.85■■■□□ 2.21
PKP3-208ENST00000531857 MAGI2Q86UL8 1455 aa28.84■■■□□ 2.21
PKP3-208ENST00000531857 POGZQ7Z3K3 1410 aa28.83■■■□□ 2.21
PKP3-208ENST00000531857 SCAPERQ9BY12 1400 aa28.83■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms