RNA–Protein interactions for RNA: ENST00000515676.5

CCT5-214, Transcript of chaperonin containing TCP1 subunit 5, humanhuman

TSL 2 BASIC

Gene CCT5, Length 1,997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT5-214ENST00000515676 PABPC4Q13310 644 aaKnown RBP eCLIP21.07■□□□□ 0.967e-43■■□□□ 11.6
CCT5-214ENST00000515676 DDX3XO00571 662 aaKnown RBP eCLIP20.7■□□□□ 0.93e-38■■■■□ 22.6
CCT5-214ENST00000515676 PUM2Q8TB72 1066 aaKnown RBP eCLIP18.33■□□□□ 0.527e-29■□□□□ 10.4
CCT5-214ENST00000515676 CPSF6Q16630 551 aaKnown RBP eCLIP18.57■□□□□ 0.566e-19■□□□□ 8.1
CCT5-214ENST00000515676 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.68■■□□□ 1.224e-18■□□□□ 8.9
CCT5-214ENST00000515676 ZNF622Q969S3 477 aaKnown RBP eCLIP22.12■■□□□ 1.131e-15■□□□□ 9.9
CCT5-214ENST00000515676 NOLC1Q14978 699 aaKnown RBP eCLIP21.89■■□□□ 1.095e-13■■■■□ 22.6
CCT5-214ENST00000515676 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.4■■□□□ 1.026e-13■□□□□ 10.1
CCT5-214ENST00000515676 SND1Q7KZF4 910 aaKnown RBP eCLIP20.54■□□□□ 0.884e-12■□□□□ 8.2
CCT5-214ENST00000515676 SRSF7Q16629 238 aaKnown RBP eCLIP16.38■□□□□ 0.217e-12■□□□□ 8.4
CCT5-214ENST00000515676 SF3B1O75533 1304 aaKnown RBP eCLIP19.75■□□□□ 0.753e-11■■■■■ 61.7
CCT5-214ENST00000515676 RBM22Q9NW64 420 aaKnown RBP eCLIP19.37■□□□□ 0.694e-10■■■■■ 53.8
CCT5-214ENST00000515676 YBX3P16989 372 aaKnown RBP eCLIP21.41■■□□□ 1.022e-9■□□□□ 9.4
CCT5-214ENST00000515676 FXR2P51116 673 aaKnown RBP eCLIP21.45■■□□□ 1.024e-9■■■□□ 16.5
CCT5-214ENST00000515676 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.88■■□□□ 1.894e-9■■■■□ 19.4
CCT5-214ENST00000515676 GPKOWQ92917 476 aaPredicted RBP eCLIP21.68■■□□□ 1.065e-9■■■■□ 24.1
CCT5-214ENST00000515676 HNRNPMP52272 730 aaKnown RBP eCLIP27.44■■□□□ 1.986e-9■■■■□ 21.8
CCT5-214ENST00000515676 FMR1Q06787 632 aaKnown RBP eCLIP21.61■■□□□ 1.056e-9■■■■□ 26.2
CCT5-214ENST00000515676 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.57■□□□□ 0.886e-9■□□□□ 11.1
CCT5-214ENST00000515676 EFTUD2Q15029 972 aaKnown RBP eCLIP19.73■□□□□ 0.751e-8■■■■■ 35.1
CCT5-214ENST00000515676 HLTFQ14527 1009 aaKnown RBP eCLIP20.41■□□□□ 0.862e-8■■□□□ 12.4
CCT5-214ENST00000515676 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.02■■□□□ 1.444e-8■□□□□ 10.7
CCT5-214ENST00000515676 RPS3P23396 243 aaKnown RBP eCLIP18.9■□□□□ 0.625e-8■■■□□ 17.1
CCT5-214ENST00000515676 LSM11P83369 360 aaKnown RBP eCLIP17.75■□□□□ 0.436e-8■■□□□ 11.8
CCT5-214ENST00000515676 AQRO60306 1485 aaKnown RBP eCLIP29.3■■■□□ 2.287e-8■■■■□ 23.4
CCT5-214ENST00000515676 KHSRPQ92945 711 aaKnown RBP eCLIP19.9■□□□□ 0.787e-8■■□□□ 14
CCT5-214ENST00000515676 TRA2AQ13595 282 aaKnown RBP eCLIP17.48■□□□□ 0.397e-8■□□□□ 8.4
CCT5-214ENST00000515676 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.44■□□□□ 0.382e-7■■□□□ 11.9
CCT5-214ENST00000515676 NIPBLQ6KC79 2804 aaeCLIP13.97□□□□□ -0.172e-7■■■■□ 20.4
CCT5-214ENST00000515676 RBM15Q96T37 977 aaKnown RBP eCLIP19.99■□□□□ 0.793e-7■□□□□ 8.1
CCT5-214ENST00000515676 G3BP1Q13283 466 aaKnown RBP eCLIP23.25■■□□□ 1.313e-7■■■□□ 15.2
CCT5-214ENST00000515676 LARP4Q71RC2 724 aaKnown RBP eCLIP18.95■□□□□ 0.627e-7■■□□□ 14.1
CCT5-214ENST00000515676 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.53■□□□□ 0.727e-7■■■□□ 16
CCT5-214ENST00000515676 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.85□□□□□ -0.039e-7■■■□□ 18.4
CCT5-214ENST00000515676 PPIGQ13427 754 aaKnown RBP eCLIP19.32■□□□□ 0.681e-6■□□□□ 9.6
CCT5-214ENST00000515676 SF3B4Q15427 424 aaKnown RBP eCLIP16.98■□□□□ 0.312e-6■■□□□ 13.7
CCT5-214ENST00000515676 SUB1P53999 127 aaKnown RBP eCLIP15.41■□□□□ 0.062e-6■■■■■ 123.8
CCT5-214ENST00000515676 AARSP49588 968 aaKnown RBP eCLIP20.62■□□□□ 0.892e-6■□□□□ 8.1
CCT5-214ENST00000515676 HNRNPLP14866 589 aaKnown RBP eCLIP19.04■□□□□ 0.642e-6■■□□□ 12
CCT5-214ENST00000515676 SF3A3Q12874 501 aaKnown RBP eCLIP19.63■□□□□ 0.732e-6■□□□□ 9.2
CCT5-214ENST00000515676 TIA1P31483 386 aaKnown RBP eCLIP18.38■□□□□ 0.533e-6■■■□□ 18.8
CCT5-214ENST00000515676 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.05■■□□□ 1.124e-6■□□□□ 8.1
CCT5-214ENST00000515676 FUSP35637 526 aaKnown RBP eCLIP12□□□□□ -0.494e-6■■■□□ 18.3
CCT5-214ENST00000515676 PUM1Q14671 1186 aaKnown RBP eCLIP18.02■□□□□ 0.485e-6■□□□□ 9.2
CCT5-214ENST00000515676 FXR1P51114 621 aaKnown RBP eCLIP21.29■■□□□ 15e-6■■■□□ 14.9
CCT5-214ENST00000515676 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.18■□□□□ 0.985e-6■□□□□ 10.2
CCT5-214ENST00000515676 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.95■□□□□ 0.627e-6■■■■■ 27.5
Retrieved 47 of 47 RNA–protein pairs in 24.7 ms